RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
HDAC8-204ENST00000373560 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
HDAC8-204ENST00000373560 FOXN1O15353 648 aa17.83■□□□□ 0.44
HDAC8-204ENST00000373560 FCHSD2O94868 740 aa17.83■□□□□ 0.44
HDAC8-204ENST00000373560 DPEP1P16444 411 aa17.83■□□□□ 0.44
HDAC8-204ENST00000373560 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
HDAC8-204ENST00000373560 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
HDAC8-204ENST00000373560 KDM2BQ8NHM5 1336 aa17.81■□□□□ 0.44
HDAC8-204ENST00000373560 RNF181Q9P0P0 153 aa17.81■□□□□ 0.44
HDAC8-204ENST00000373560 TIAM2Q8IVF5 1701 aa17.81■□□□□ 0.44
HDAC8-204ENST00000373560 KCNA3P22001 575 aa17.8■□□□□ 0.44
HDAC8-204ENST00000373560 SSFA2P28290 1259 aa17.79■□□□□ 0.44
HDAC8-204ENST00000373560 TGFB2P61812 414 aa17.79■□□□□ 0.44
HDAC8-204ENST00000373560 USHBP1Q8N6Y0 703 aa17.79■□□□□ 0.44
HDAC8-204ENST00000373560 IP6K1Q92551 441 aa17.79■□□□□ 0.44
HDAC8-204ENST00000373560 MPRIPQ6WCQ1 1025 aa17.78■□□□□ 0.44
HDAC8-204ENST00000373560 NSD3Q9BZ95 1437 aa17.78■□□□□ 0.44
HDAC8-204ENST00000373560 MKRN1Q9UHC7 482 aaKnown RBP17.77■□□□□ 0.44
HDAC8-204ENST00000373560 SPDYE4A6NLX3 237 aa17.76■□□□□ 0.43
HDAC8-204ENST00000373560 FBLN1P23142 703 aa17.76■□□□□ 0.43
HDAC8-204ENST00000373560 ITPK1Q13572 414 aa17.75■□□□□ 0.43
HDAC8-204ENST00000373560 GNPATO15228 680 aa17.74■□□□□ 0.43
HDAC8-204ENST00000373560 RASSF7Q02833 373 aa17.74■□□□□ 0.43
HDAC8-204ENST00000373560 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
HDAC8-204ENST00000373560 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
HDAC8-204ENST00000373560 HOXC9P31274 260 aa17.73■□□□□ 0.43
HDAC8-204ENST00000373560 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
HDAC8-204ENST00000373560 CCDC88AQ3V6T2 1871 aa17.72■□□□□ 0.43
HDAC8-204ENST00000373560 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
HDAC8-204ENST00000373560 ABHD8Q96I13 439 aa17.72■□□□□ 0.43
HDAC8-204ENST00000373560 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
HDAC8-204ENST00000373560 PRDM10Q9NQV6 1147 aa17.72■□□□□ 0.43
HDAC8-204ENST00000373560 PIGBQ92521 554 aa17.71■□□□□ 0.43
HDAC8-204ENST00000373560 KDM6AO15550 1401 aaPredicted RBP17.71■□□□□ 0.43
HDAC8-204ENST00000373560 CYP27B1O15528 508 aa17.7■□□□□ 0.42
HDAC8-204ENST00000373560 FKBP8Q14318 412 aa17.7■□□□□ 0.42
HDAC8-204ENST00000373560 EDC4Q6P2E9 1401 aaKnown RBP17.7■□□□□ 0.42
HDAC8-204ENST00000373560 COL5A3P25940 1745 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-204ENST00000373560 LOC102724428A0A0B4J2F2 783 aa17.69■□□□□ 0.42
HDAC8-204ENST00000373560 SIK1P57059 783 aa17.69■□□□□ 0.42
HDAC8-204ENST00000373560 POTECB2RU33 542 aa17.68■□□□□ 0.42
HDAC8-204ENST00000373560 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
HDAC8-204ENST00000373560 PCDH11XQ9BZA7 1347 aa17.68■□□□□ 0.42
HDAC8-204ENST00000373560 PCDH11YQ9BZA8 1340 aa17.68■□□□□ 0.42
HDAC8-204ENST00000373560 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
HDAC8-204ENST00000373560 CHRNA5P30532 468 aa17.67■□□□□ 0.42
HDAC8-204ENST00000373560 LBX1P52954 281 aa17.67■□□□□ 0.42
HDAC8-204ENST00000373560 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
HDAC8-204ENST00000373560 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
HDAC8-204ENST00000373560 TNRC18O15417 2968 aaPredicted RBP17.66■□□□□ 0.42
HDAC8-204ENST00000373560 GLTPD2A6NH11 291 aa17.65■□□□□ 0.42
HDAC8-204ENST00000373560 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
HDAC8-204ENST00000373560 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
HDAC8-204ENST00000373560 GYS1P13807 737 aa17.65■□□□□ 0.42
HDAC8-204ENST00000373560 VEGFAP15692 232 aaPredicted RBP17.65■□□□□ 0.42
HDAC8-204ENST00000373560 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
HDAC8-204ENST00000373560 DALRD3Q5D0E6 543 aaKnown RBP17.65■□□□□ 0.42
HDAC8-204ENST00000373560 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
HDAC8-204ENST00000373560 CTCFP49711 727 aaPredicted RBP17.64■□□□□ 0.41
HDAC8-204ENST00000373560 TMF1P82094 1093 aa17.64■□□□□ 0.41
HDAC8-204ENST00000373560 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
HDAC8-204ENST00000373560 CREBZFQ9NS37 354 aa17.64■□□□□ 0.41
HDAC8-204ENST00000373560 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
HDAC8-204ENST00000373560 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
HDAC8-204ENST00000373560 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
HDAC8-204ENST00000373560 AMPHP49418 695 aa17.63■□□□□ 0.41
HDAC8-204ENST00000373560 RAPGEF4Q8WZA2 1011 aa17.63■□□□□ 0.41
HDAC8-204ENST00000373560 KDRP35968 1356 aa17.63■□□□□ 0.41
HDAC8-204ENST00000373560 DLEC1Q9Y238 1755 aa17.63■□□□□ 0.41
HDAC8-204ENST00000373560 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
HDAC8-204ENST00000373560 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
HDAC8-204ENST00000373560 HSPA8P11142 646 aaKnown RBP17.61■□□□□ 0.41
HDAC8-204ENST00000373560 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
HDAC8-204ENST00000373560 DDR1Q08345 913 aa17.61■□□□□ 0.41
HDAC8-204ENST00000373560 NLGN1Q8N2Q7 840 aa17.61■□□□□ 0.41
HDAC8-204ENST00000373560 TMC1Q8TDI8 760 aa17.61■□□□□ 0.41
HDAC8-204ENST00000373560 ARHGEF1Q92888 912 aaKnown RBP17.61■□□□□ 0.41
HDAC8-204ENST00000373560 SLC4A9Q96Q91 983 aa17.61■□□□□ 0.41
HDAC8-204ENST00000373560 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
HDAC8-204ENST00000373560 PARP3Q9Y6F1 533 aa17.6■□□□□ 0.41
HDAC8-204ENST00000373560 ZC3H4Q9UPT8 1303 aaKnown RBP17.6■□□□□ 0.41
HDAC8-204ENST00000373560 ZNF831Q5JPB2 1677 aa17.59■□□□□ 0.41
HDAC8-204ENST00000373560 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
HDAC8-204ENST00000373560 CCDC85CA6NKD9 419 aa17.59■□□□□ 0.41
HDAC8-204ENST00000373560 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
HDAC8-204ENST00000373560 VEGFBP49765 207 aa17.59■□□□□ 0.41
HDAC8-204ENST00000373560 RGS19P49795 217 aa17.59■□□□□ 0.41
HDAC8-204ENST00000373560 WBP1LQ9NX94 342 aa17.59■□□□□ 0.41
HDAC8-204ENST00000373560 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.41
HDAC8-204ENST00000373560 TRAPPC3LQ5T215 181 aa17.58■□□□□ 0.4
HDAC8-204ENST00000373560 AIDAQ96BJ3 306 aa17.58■□□□□ 0.4
HDAC8-204ENST00000373560 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
HDAC8-204ENST00000373560 HDGFL2Q7Z4V5 671 aaPredicted RBP17.57■□□□□ 0.4
HDAC8-204ENST00000373560 ATG3Q9NT62 314 aa17.57■□□□□ 0.4
HDAC8-204ENST00000373560 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
HDAC8-204ENST00000373560 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
HDAC8-204ENST00000373560 DICER1Q9UPY3 1922 aaKnown RBP17.57■□□□□ 0.4
HDAC8-204ENST00000373560 LMNB1P20700 586 aa17.56■□□□□ 0.4
HDAC8-204ENST00000373560 CHADLQ6NUI6 762 aa17.55■□□□□ 0.4
HDAC8-204ENST00000373560 REM2Q8IYK8 340 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms