RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SLC39A6Q13433 755 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 TPRNQ4KMQ1 711 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 NUTM1Q86Y26 1132 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 ANKRD24Q8TF21 1146 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 IP6K1Q92551 441 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 SSH2Q76I76 1423 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 PI4KAP2A4QPH2 592 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 TTC22Q5TAA0 569 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 PI4KAP1Q8N8J0 262 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 DLG5Q8TDM6 1919 aa14.53□□□□□ -0.08
PDE6C-201ENST00000371447 C3P01024 1663 aa14.52□□□□□ -0.08
PDE6C-201ENST00000371447 UBTFL1P0CB47 393 aaPredicted RBP14.52□□□□□ -0.08
PDE6C-201ENST00000371447 CCT4P50991 539 aaKnown RBP14.52□□□□□ -0.08
PDE6C-201ENST00000371447 ANTXR1Q9H6X2 564 aa14.52□□□□□ -0.08
PDE6C-201ENST00000371447 MAP3K5Q99683 1374 aa14.52□□□□□ -0.09
PDE6C-201ENST00000371447 SURF6O75683 361 aaKnown RBP14.52□□□□□ -0.09
PDE6C-201ENST00000371447 OS9Q13438 667 aaPredicted RBP14.52□□□□□ -0.09
PDE6C-201ENST00000371447 JARID2Q92833 1246 aaPredicted RBP14.51□□□□□ -0.09
PDE6C-201ENST00000371447 MON2Q7Z3U7 1717 aa14.51□□□□□ -0.09
PDE6C-201ENST00000371447 NBPF7P0C2Y1 421 aaPredicted RBP14.5□□□□□ -0.09
PDE6C-201ENST00000371447 MYL6BP14649 208 aa14.5□□□□□ -0.09
PDE6C-201ENST00000371447 KIAA0232Q92628 1395 aa14.5□□□□□ -0.09
PDE6C-201ENST00000371447 DTNBO60941 627 aa14.49□□□□□ -0.09
PDE6C-201ENST00000371447 PROSER3Q2NL68 480 aa14.49□□□□□ -0.09
PDE6C-201ENST00000371447 CHMP5Q9NZZ3 219 aa14.49□□□□□ -0.09
PDE6C-201ENST00000371447 SRGAP3O43295 1099 aa14.49□□□□□ -0.09
PDE6C-201ENST00000371447 ATF3P18847 181 aa14.49□□□□□ -0.09
PDE6C-201ENST00000371447 RGS12O14924 1447 aa14.49□□□□□ -0.09
PDE6C-201ENST00000371447 FOXD4L6Q3SYB3 417 aaPredicted RBP14.48□□□□□ -0.09
PDE6C-201ENST00000371447 PLEKHO1Q53GL0 409 aaPredicted RBP14.48□□□□□ -0.09
PDE6C-201ENST00000371447 CASC1Q6TDU7 716 aa14.48□□□□□ -0.09
PDE6C-201ENST00000371447 FOXD4L3Q6VB84 417 aaPredicted RBP14.48□□□□□ -0.09
PDE6C-201ENST00000371447 USP44Q9H0E7 712 aa14.48□□□□□ -0.09
PDE6C-201ENST00000371447 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
PDE6C-201ENST00000371447 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
PDE6C-201ENST00000371447 PPP1R42Q7Z4L9 355 aa14.48□□□□□ -0.09
PDE6C-201ENST00000371447 KCNH5Q8NCM2 988 aa14.48□□□□□ -0.09
PDE6C-201ENST00000371447 KIF2CQ99661 725 aa14.48□□□□□ -0.09
PDE6C-201ENST00000371447 LRRCC1Q9C099 1032 aa14.48□□□□□ -0.09
PDE6C-201ENST00000371447 FER1L4A9Z1Z3 1794 aa14.47□□□□□ -0.09
PDE6C-201ENST00000371447 GNAI3P08754 354 aa14.47□□□□□ -0.09
PDE6C-201ENST00000371447 CWF19L2Q2TBE0 894 aaKnown RBP14.47□□□□□ -0.09
PDE6C-201ENST00000371447 SRCIN1Q9C0H9 1055 aa14.47□□□□□ -0.09
PDE6C-201ENST00000371447 ANO2Q9NQ90 1003 aa14.47□□□□□ -0.09
PDE6C-201ENST00000371447 KDRP35968 1356 aa14.47□□□□□ -0.09
PDE6C-201ENST00000371447 PDE1AP54750 535 aa14.47□□□□□ -0.09
PDE6C-201ENST00000371447 MCM4P33991 863 aa14.46□□□□□ -0.09
PDE6C-201ENST00000371447 RBM25P49756 843 aaKnown RBP14.46□□□□□ -0.09
PDE6C-201ENST00000371447 C9orf78Q9NZ63 289 aaPredicted RBP14.46□□□□□ -0.09
PDE6C-201ENST00000371447 AKAP12Q02952 1782 aa14.46□□□□□ -0.09
PDE6C-201ENST00000371447 ATP10DQ9P241 1426 aa14.46□□□□□ -0.09
PDE6C-201ENST00000371447 EIF4A1P60842 406 aaKnown RBP14.46□□□□□ -0.09
PDE6C-201ENST00000371447 SLIT1O75093 1534 aa14.46□□□□□ -0.09
PDE6C-201ENST00000371447 NCLP19338 710 aaKnown RBP14.45□□□□□ -0.1
PDE6C-201ENST00000371447 UNC5CLQ8IV45 518 aa14.45□□□□□ -0.1
PDE6C-201ENST00000371447 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
PDE6C-201ENST00000371447 CHAMP1Q96JM3 812 aa14.45□□□□□ -0.1
PDE6C-201ENST00000371447 LARP6Q9BRS8 491 aaKnown RBP14.45□□□□□ -0.1
PDE6C-201ENST00000371447 PA2G4Q9UQ80 394 aaKnown RBP14.45□□□□□ -0.1
PDE6C-201ENST00000371447 SIL1Q9H173 461 aa14.44□□□□□ -0.1
PDE6C-201ENST00000371447 ZNF330Q9Y3S2 320 aaPredicted RBP14.44□□□□□ -0.1
PDE6C-201ENST00000371447 MX1P20591 662 aa14.44□□□□□ -0.1
PDE6C-201ENST00000371447 ARHGEF25Q86VW2 580 aa14.44□□□□□ -0.1
PDE6C-201ENST00000371447 MAP3K2Q9Y2U5 619 aa14.44□□□□□ -0.1
PDE6C-201ENST00000371447 KNDC1Q76NI1 1749 aa14.44□□□□□ -0.1
PDE6C-201ENST00000371447 NFATC2IPQ8NCF5 419 aa14.44□□□□□ -0.1
PDE6C-201ENST00000371447 K7ELQ4 463 aaPredicted RBP14.43□□□□□ -0.1
PDE6C-201ENST00000371447 SSFA2P28290 1259 aa14.43□□□□□ -0.1
PDE6C-201ENST00000371447 DNAAF4Q8WXU2 420 aa14.43□□□□□ -0.1
PDE6C-201ENST00000371447 TNPO1Q92973 898 aaKnown RBP14.43□□□□□ -0.1
PDE6C-201ENST00000371447 UPF3BQ9BZI7 483 aaKnown RBP14.43□□□□□ -0.1
PDE6C-201ENST00000371447 RNMTO43148 476 aaKnown RBP14.43□□□□□ -0.1
PDE6C-201ENST00000371447 HTATSF1O43719 755 aaKnown RBP14.43□□□□□ -0.1
PDE6C-201ENST00000371447 TRAK2O60296 914 aa14.43□□□□□ -0.1
PDE6C-201ENST00000371447 ATP8B2P98198 1209 aa14.43□□□□□ -0.1
PDE6C-201ENST00000371447 DDX54Q8TDD1 881 aaKnown RBP14.43□□□□□ -0.1
PDE6C-201ENST00000371447 USP26Q9BXU7 913 aa14.43□□□□□ -0.1
PDE6C-201ENST00000371447 NEK4P51957 841 aa14.42□□□□□ -0.1
PDE6C-201ENST00000371447 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
PDE6C-201ENST00000371447 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
PDE6C-201ENST00000371447 A0A0G2JS52 829 aa14.41□□□□□ -0.1
PDE6C-201ENST00000371447 KLHDC4Q8TBB5 520 aa14.41□□□□□ -0.1
PDE6C-201ENST00000371447 PKP1Q13835 747 aa14.41□□□□□ -0.1
PDE6C-201ENST00000371447 C19orf44Q9H6X5 657 aa14.41□□□□□ -0.1
PDE6C-201ENST00000371447 NPHP4O75161 1426 aaPredicted RBP14.41□□□□□ -0.1
PDE6C-201ENST00000371447 ZGPATQ8N5A5 531 aaKnown RBP14.41□□□□□ -0.1
PDE6C-201ENST00000371447 ERC2O15083 957 aa14.4□□□□□ -0.1
PDE6C-201ENST00000371447 ANKARQ7Z5J8 1434 aa14.4□□□□□ -0.1
PDE6C-201ENST00000371447 RIC3Q7Z5B4 369 aa14.4□□□□□ -0.1
PDE6C-201ENST00000371447 SOS1Q07889 1333 aaPredicted RBP14.4□□□□□ -0.1
PDE6C-201ENST00000371447 STRN4Q9NRL3 753 aa14.39□□□□□ -0.11
PDE6C-201ENST00000371447 REC8O95072 547 aa14.39□□□□□ -0.11
PDE6C-201ENST00000371447 NRKQ7Z2Y5 1582 aa14.38□□□□□ -0.11
PDE6C-201ENST00000371447 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
PDE6C-201ENST00000371447 PALD1Q9ULE6 856 aa14.38□□□□□ -0.11
PDE6C-201ENST00000371447 CWC27Q6UX04 472 aaKnown RBP14.38□□□□□ -0.11
PDE6C-201ENST00000371447 DBF4Q9UBU7 674 aaPredicted RBP14.38□□□□□ -0.11
PDE6C-201ENST00000371447 ATP5J2-PTCD1G3V325 749 aa14.38□□□□□ -0.11
PDE6C-201ENST00000371447 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms