RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TRIM52Q96A61 297 aa5.19□□□□□ -1.58
MCF2-202ENST00000370573 SMPD1P17405 629 aa5.19□□□□□ -1.58
MCF2-202ENST00000370573 FOXJ1Q92949 421 aa5.19□□□□□ -1.58
MCF2-202ENST00000370573 DUOX2Q9NRD8 1548 aa5.19□□□□□ -1.58
MCF2-202ENST00000370573 AGERQ15109 404 aa5.18□□□□□ -1.58
MCF2-202ENST00000370573 DACH1Q9UI36 760 aa5.18□□□□□ -1.58
MCF2-202ENST00000370573 DHX29Q7Z478 1369 aaKnown RBP5.18□□□□□ -1.58
MCF2-202ENST00000370573 POTECB2RU33 542 aa5.18□□□□□ -1.58
MCF2-202ENST00000370573 HPS1Q92902 700 aa5.18□□□□□ -1.58
MCF2-202ENST00000370573 TLL2Q9Y6L7 1015 aa5.18□□□□□ -1.58
MCF2-202ENST00000370573 YEATS2Q9ULM3 1422 aa5.18□□□□□ -1.58
MCF2-202ENST00000370573 HECW2Q9P2P5 1572 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 SIAH2O43255 324 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 MPHOSPH9Q99550 1183 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 AAASQ9NRG9 546 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 ABCA6Q8N139 1617 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 ZMYM4Q5VZL5 1548 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 PZPP20742 1482 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 ERBINQ96RT1 1412 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 ARID5BQ14865 1188 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 NR6A1Q15406 480 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 PCMTD1Q96MG8 357 aaPredicted RBP5.17□□□□□ -1.58
MCF2-202ENST00000370573 A2MP01023 1474 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 NUP155O75694 1391 aa5.17□□□□□ -1.58
MCF2-202ENST00000370573 RFC5P40937 340 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 MCM6Q14566 821 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 EPS8L1Q8TE68 723 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 POM121Q96HA1 1249 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 DIP2CQ9Y2E4 1556 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 ACIN1Q9UKV3 1341 aaKnown RBP5.16□□□□□ -1.58
MCF2-202ENST00000370573 MAGEB6P1A0A0J9YX57 407 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 KIF3BO15066 747 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 AXIN1O15169 862 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 C4orf48Q5BLP8 95 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 PPP2R2DQ66LE6 453 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 ZNF787Q6DD87 383 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 KCTD17Q8N5Z5 321 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 GOPCQ9HD26 462 aa5.16□□□□□ -1.58
MCF2-202ENST00000370573 SIN3AQ96ST3 1273 aa5.15□□□□□ -1.58
MCF2-202ENST00000370573 HMX1Q9NP08 348 aaPredicted RBP5.15□□□□□ -1.58
MCF2-202ENST00000370573 WASF2Q9Y6W5 498 aa5.15□□□□□ -1.58
MCF2-202ENST00000370573 ATP10AO60312 1499 aa5.15□□□□□ -1.58
MCF2-202ENST00000370573 MAGI2Q86UL8 1455 aa5.15□□□□□ -1.58
MCF2-202ENST00000370573 UNC13BO14795 1591 aa5.15□□□□□ -1.58
MCF2-202ENST00000370573 CLSPNQ9HAW4 1339 aa5.15□□□□□ -1.58
MCF2-202ENST00000370573 KDM5DQ9BY66 1539 aa5.15□□□□□ -1.59
MCF2-202ENST00000370573 FNBP4Q8N3X1 1017 aaPredicted RBP5.15□□□□□ -1.59
MCF2-202ENST00000370573 CARD14Q9BXL6 1004 aa5.15□□□□□ -1.59
MCF2-202ENST00000370573 MROH1Q8NDA8 1641 aa5.14□□□□□ -1.59
MCF2-202ENST00000370573 AVPP01185 164 aa5.14□□□□□ -1.59
MCF2-202ENST00000370573 USP17L8P0C7I0 530 aa5.14□□□□□ -1.59
MCF2-202ENST00000370573 VARSP26640 1264 aaKnown RBP5.14□□□□□ -1.59
MCF2-202ENST00000370573 FAM135AQ9P2D6 1515 aa5.14□□□□□ -1.59
MCF2-202ENST00000370573 DEPDC5O75140 1603 aa5.14□□□□□ -1.59
MCF2-202ENST00000370573 EIF2AK4Q9P2K8 1649 aaKnown RBP5.14□□□□□ -1.59
MCF2-202ENST00000370573 ZEB1P37275 1124 aaPredicted RBP5.13□□□□□ -1.59
MCF2-202ENST00000370573 GGT6Q6P531 493 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 TRAIPQ9BWF2 469 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 SIGLEC1Q9BZZ2 1709 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 ANKRD30BQ9BXX2 1392 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 VWDEQ8N2E2 1590 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 NEUROD1Q13562 356 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 BPHLQ86WA6 291 aaPredicted RBP5.13□□□□□ -1.59
MCF2-202ENST00000370573 IQGAP3Q86VI3 1631 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 BCORL1Q5H9F3 1711 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 ARHGEF40Q8TER5 1519 aa5.13□□□□□ -1.59
MCF2-202ENST00000370573 AEBP1Q8IUX7 1158 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 FAM174AQ8TBP5 190 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 RNF17Q9BXT8 1623 aaKnown RBP5.12□□□□□ -1.59
MCF2-202ENST00000370573 REREQ9P2R6 1566 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 NBPF14Q5TI25 921 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 PROSER2Q86WR7 435 aaPredicted RBP5.12□□□□□ -1.59
MCF2-202ENST00000370573 RGS22Q8NE09 1264 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 ARMC2Q8NEN0 867 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 GMPR2Q9P2T1 348 aaKnown RBP5.12□□□□□ -1.59
MCF2-202ENST00000370573 FKBPLQ9UIM3 349 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 AGLP35573 1532 aa5.12□□□□□ -1.59
MCF2-202ENST00000370573 PRDM15P57071 1507 aaPredicted RBP5.12□□□□□ -1.59
MCF2-202ENST00000370573 RAD21O60216 631 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 ZNF428Q96B54 188 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 PLA2R1Q13018 1463 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 KANK1Q14678 1352 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 BMP1P13497 986 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 NNTQ13423 1086 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 CTC1Q2NKJ3 1217 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 SH3BP5LQ7L8J4 393 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 CRIPAKQ8N1N5 446 aa5.11□□□□□ -1.59
MCF2-202ENST00000370573 MLECQ14165 292 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 SH3RF1Q7Z6J0 888 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 WASHC2CQ9Y4E1 1318 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 ABCC3O15438 1527 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 LMTK2Q8IWU2 1503 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 CAPN5O15484 640 aaPredicted RBP5.1□□□□□ -1.59
MCF2-202ENST00000370573 IRF5Q13568 498 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 RETREG2Q8NC44 543 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 ARHGAP9Q9BRR9 750 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 MTMR7Q9Y216 660 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 E9PCH4 1651 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 TET3O43151 1660 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 CEP152O94986 1710 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms