RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
PHTF1-204ENST00000369604 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
PHTF1-204ENST00000369604 VWDEQ8N2E2 1590 aa17.27■□□□□ 0.36
PHTF1-204ENST00000369604 CDK19Q9BWU1 502 aa17.27■□□□□ 0.36
PHTF1-204ENST00000369604 ATP10DQ9P241 1426 aa17.27■□□□□ 0.36
PHTF1-204ENST00000369604 INO80Q9ULG1 1556 aaPredicted RBP17.27■□□□□ 0.36
PHTF1-204ENST00000369604 EFCAB6Q5THR3 1501 aa17.27■□□□□ 0.36
PHTF1-204ENST00000369604 DTNBO60941 627 aa17.27■□□□□ 0.36
PHTF1-204ENST00000369604 TPM3P06753 285 aa17.27■□□□□ 0.36
PHTF1-204ENST00000369604 SLC4A2P04920 1241 aa17.27■□□□□ 0.35
PHTF1-204ENST00000369604 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.35
PHTF1-204ENST00000369604 ANAPC15P60006 121 aa17.27■□□□□ 0.35
PHTF1-204ENST00000369604 MLECQ14165 292 aa17.27■□□□□ 0.35
PHTF1-204ENST00000369604 KCNF1Q9H3M0 494 aa17.27■□□□□ 0.35
PHTF1-204ENST00000369604 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
PHTF1-204ENST00000369604 ZSCAN22P10073 491 aaPredicted RBP17.26■□□□□ 0.35
PHTF1-204ENST00000369604 CHMLP26374 656 aa17.26■□□□□ 0.35
PHTF1-204ENST00000369604 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
PHTF1-204ENST00000369604 F6X3S4 739 aa17.25■□□□□ 0.35
PHTF1-204ENST00000369604 C16orf45Q96MC5 204 aaPredicted RBP17.25■□□□□ 0.35
PHTF1-204ENST00000369604 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
PHTF1-204ENST00000369604 IFT172Q9UG01 1749 aa17.25■□□□□ 0.35
PHTF1-204ENST00000369604 PTGS1P23219 599 aa17.25■□□□□ 0.35
PHTF1-204ENST00000369604 FANCAO15360 1455 aa17.25■□□□□ 0.35
PHTF1-204ENST00000369604 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
PHTF1-204ENST00000369604 AP5Z1O43299 807 aa17.24■□□□□ 0.35
PHTF1-204ENST00000369604 STX6O43752 255 aa17.24■□□□□ 0.35
PHTF1-204ENST00000369604 ANKRD7Q92527 254 aa17.24■□□□□ 0.35
PHTF1-204ENST00000369604 FEZ1Q99689 392 aa17.24■□□□□ 0.35
PHTF1-204ENST00000369604 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
PHTF1-204ENST00000369604 GLI2P10070 1586 aa17.24■□□□□ 0.35
PHTF1-204ENST00000369604 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
PHTF1-204ENST00000369604 OGFRQ9NZT2 677 aa17.23■□□□□ 0.35
PHTF1-204ENST00000369604 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
PHTF1-204ENST00000369604 SYT1P21579 422 aa17.23■□□□□ 0.35
PHTF1-204ENST00000369604 ZNF592Q92610 1267 aa17.23■□□□□ 0.35
PHTF1-204ENST00000369604 CCDC192P0DO97 292 aa17.23■□□□□ 0.35
PHTF1-204ENST00000369604 IL13P35225 146 aa17.23■□□□□ 0.35
PHTF1-204ENST00000369604 NPATQ14207 1427 aa17.23■□□□□ 0.35
PHTF1-204ENST00000369604 KNDC1Q76NI1 1749 aa17.22■□□□□ 0.35
PHTF1-204ENST00000369604 MAP4K4O95819 1239 aaPredicted RBP17.22■□□□□ 0.35
PHTF1-204ENST00000369604 RGS12O14924 1447 aa17.22■□□□□ 0.35
PHTF1-204ENST00000369604 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
PHTF1-204ENST00000369604 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
PHTF1-204ENST00000369604 MCM10Q7L590 875 aa17.22■□□□□ 0.35
PHTF1-204ENST00000369604 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
PHTF1-204ENST00000369604 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
PHTF1-204ENST00000369604 VPS37CA5D8V6 355 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-204ENST00000369604 F13A1P00488 732 aa17.21■□□□□ 0.35
PHTF1-204ENST00000369604 GNAI2P04899 355 aa17.21■□□□□ 0.35
PHTF1-204ENST00000369604 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
PHTF1-204ENST00000369604 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-204ENST00000369604 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.35
PHTF1-204ENST00000369604 CAMK4Q16566 473 aa17.21■□□□□ 0.35
PHTF1-204ENST00000369604 UNC5CLQ8IV45 518 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 CTIFO43310 598 aaKnown RBP17.2■□□□□ 0.34
PHTF1-204ENST00000369604 TNNT1P13805 278 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
PHTF1-204ENST00000369604 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 TCHHQ07283 1943 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 PTPRCP08575 1304 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 LRMPQ12912 555 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 NAA30Q147X3 362 aaPredicted RBP17.2■□□□□ 0.34
PHTF1-204ENST00000369604 TAF3Q5VWG9 929 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
PHTF1-204ENST00000369604 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
PHTF1-204ENST00000369604 NME9Q86XW9 330 aa17.19■□□□□ 0.34
PHTF1-204ENST00000369604 TRIM5Q9C035 493 aa17.19■□□□□ 0.34
PHTF1-204ENST00000369604 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
PHTF1-204ENST00000369604 RPAP1Q9BWH6 1393 aaPredicted RBP17.19■□□□□ 0.34
PHTF1-204ENST00000369604 MROH1Q8NDA8 1641 aa17.19■□□□□ 0.34
PHTF1-204ENST00000369604 AK2P54819 239 aa17.18■□□□□ 0.34
PHTF1-204ENST00000369604 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
PHTF1-204ENST00000369604 LUZP1Q86V48 1076 aa17.18■□□□□ 0.34
PHTF1-204ENST00000369604 G2E3Q7L622 706 aa17.18■□□□□ 0.34
PHTF1-204ENST00000369604 CCDC83Q8IWF9 413 aa17.18■□□□□ 0.34
PHTF1-204ENST00000369604 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
PHTF1-204ENST00000369604 ZCCHC11Q5TAX3 1644 aaKnown RBP17.18■□□□□ 0.34
PHTF1-204ENST00000369604 CPA1P15085 419 aa17.17■□□□□ 0.34
PHTF1-204ENST00000369604 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
PHTF1-204ENST00000369604 FUCA2Q9BTY2 467 aa17.17■□□□□ 0.34
PHTF1-204ENST00000369604 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 SMTNL1A8MU46 457 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
PHTF1-204ENST00000369604 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 NUTM1Q86Y26 1132 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 FAM200AQ8TCP9 573 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 PPLO60437 1756 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
PHTF1-204ENST00000369604 HSPA4P34932 840 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 IDI1Q13907 227 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 IL25Q9H293 177 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 CTNNA3Q9UI47 895 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 YTHDC2Q9H6S0 1430 aaKnown RBP17.16■□□□□ 0.34
PHTF1-204ENST00000369604 ZBTB22O15209 634 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 GJB2P29033 226 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 MAP3K11Q16584 847 aa17.16■□□□□ 0.34
PHTF1-204ENST00000369604 NRBP1Q9UHY1 535 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms