RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
HIPK1-203ENST00000369553 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
HIPK1-203ENST00000369553 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
HIPK1-203ENST00000369553 FMN2Q9NZ56 1722 aa12.73□□□□□ -0.37
HIPK1-203ENST00000369553 HS1BP3Q53T59 392 aa12.73□□□□□ -0.37
HIPK1-203ENST00000369553 MAP2P11137 1827 aaKnown RBP12.73□□□□□ -0.37
HIPK1-203ENST00000369553 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
HIPK1-203ENST00000369553 APAF1O14727 1248 aa12.72□□□□□ -0.37
HIPK1-203ENST00000369553 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
HIPK1-203ENST00000369553 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
HIPK1-203ENST00000369553 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
HIPK1-203ENST00000369553 PMFBP1Q8TBY8 1022 aa12.71□□□□□ -0.37
HIPK1-203ENST00000369553 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.38
HIPK1-203ENST00000369553 OGFRQ9NZT2 677 aa12.71□□□□□ -0.38
HIPK1-203ENST00000369553 TTC21BQ7Z4L5 1316 aa12.7□□□□□ -0.38
HIPK1-203ENST00000369553 USP6P35125 1406 aa12.7□□□□□ -0.38
HIPK1-203ENST00000369553 GYS2P54840 703 aa12.7□□□□□ -0.38
HIPK1-203ENST00000369553 TERF2Q15554 542 aa12.7□□□□□ -0.38
HIPK1-203ENST00000369553 POLKQ9UBT6 870 aa12.7□□□□□ -0.38
HIPK1-203ENST00000369553 ICE2Q659A1 982 aa12.7□□□□□ -0.38
HIPK1-203ENST00000369553 CALR3Q96L12 384 aaKnown RBP12.69□□□□□ -0.38
HIPK1-203ENST00000369553 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
HIPK1-203ENST00000369553 SSH2Q76I76 1423 aa12.69□□□□□ -0.38
HIPK1-203ENST00000369553 GTF2F1P35269 517 aaKnown RBP eCLIP12.69□□□□□ -0.38
HIPK1-203ENST00000369553 MFAP1P55081 439 aaKnown RBP12.69□□□□□ -0.38
HIPK1-203ENST00000369553 CHMP5Q9NZZ3 219 aa12.69□□□□□ -0.38
HIPK1-203ENST00000369553 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
HIPK1-203ENST00000369553 RAD51AP2Q09MP3 1159 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 ANKARQ7Z5J8 1434 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 IQSEC2Q5JU85 1478 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 KDM4FA0A1W2PPD8 638 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 TMEM132AQ24JP5 1023 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 FEZ1Q99689 392 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 NWD1Q149M9 1564 aa12.68□□□□□ -0.38
HIPK1-203ENST00000369553 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
HIPK1-203ENST00000369553 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
HIPK1-203ENST00000369553 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
HIPK1-203ENST00000369553 COG3Q96JB2 828 aa12.67□□□□□ -0.38
HIPK1-203ENST00000369553 EMILIN1Q9Y6C2 1016 aa12.67□□□□□ -0.38
HIPK1-203ENST00000369553 ANAPC15P60006 121 aa12.67□□□□□ -0.38
HIPK1-203ENST00000369553 PRIMPOLQ96LW4 560 aa12.67□□□□□ -0.38
HIPK1-203ENST00000369553 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
HIPK1-203ENST00000369553 U2SURPO15042 1029 aaKnown RBP12.66□□□□□ -0.38
HIPK1-203ENST00000369553 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
HIPK1-203ENST00000369553 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
HIPK1-203ENST00000369553 OVOS2A0A0J9YW53 1432 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 OVOS2Q6IE36 1432 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 ADGRL3Q9HAR2 1447 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 TDO2P48775 406 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 HSPA2P54652 639 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
HIPK1-203ENST00000369553 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
HIPK1-203ENST00000369553 KIF16BQ96L93 1317 aa12.65□□□□□ -0.38
HIPK1-203ENST00000369553 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
HIPK1-203ENST00000369553 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
HIPK1-203ENST00000369553 HNRNPH2P55795 449 aaKnown RBP12.65□□□□□ -0.38
HIPK1-203ENST00000369553 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
HIPK1-203ENST00000369553 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
HIPK1-203ENST00000369553 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
HIPK1-203ENST00000369553 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
HIPK1-203ENST00000369553 RAI14Q9P0K7 980 aa12.65□□□□□ -0.38
HIPK1-203ENST00000369553 MCM5P33992 734 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 SLFN5Q08AF3 891 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 DONSONQ9NYP3 566 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 ZNF513Q8N8E2 541 aaPredicted RBP12.64□□□□□ -0.39
HIPK1-203ENST00000369553 PDLIM2Q96JY6 352 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
HIPK1-203ENST00000369553 KCNA4P22459 653 aa12.63□□□□□ -0.39
HIPK1-203ENST00000369553 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
HIPK1-203ENST00000369553 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
HIPK1-203ENST00000369553 CDK12Q9NYV4 1490 aaPredicted RBP12.63□□□□□ -0.39
HIPK1-203ENST00000369553 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
HIPK1-203ENST00000369553 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
HIPK1-203ENST00000369553 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
HIPK1-203ENST00000369553 TTC36A6NLP5 189 aa12.63□□□□□ -0.39
HIPK1-203ENST00000369553 KIAA2012Q0VF49 1180 aa12.63□□□□□ -0.39
HIPK1-203ENST00000369553 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
HIPK1-203ENST00000369553 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
HIPK1-203ENST00000369553 ANKRD7Q92527 254 aa12.62□□□□□ -0.39
HIPK1-203ENST00000369553 TNPO1Q92973 898 aaKnown RBP12.62□□□□□ -0.39
HIPK1-203ENST00000369553 SUFUQ9UMX1 484 aa12.62□□□□□ -0.39
HIPK1-203ENST00000369553 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
HIPK1-203ENST00000369553 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
HIPK1-203ENST00000369553 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
HIPK1-203ENST00000369553 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
HIPK1-203ENST00000369553 NBPF9Q3BBW0 867 aa12.61□□□□□ -0.39
HIPK1-203ENST00000369553 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
HIPK1-203ENST00000369553 NOL10Q9BSC4 688 aaKnown RBP12.61□□□□□ -0.39
HIPK1-203ENST00000369553 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
HIPK1-203ENST00000369553 USP31Q70CQ4 1352 aa12.61□□□□□ -0.39
HIPK1-203ENST00000369553 CCDC189A1A4V9 331 aa12.61□□□□□ -0.39
HIPK1-203ENST00000369553 IL13P35225 146 aa12.61□□□□□ -0.39
HIPK1-203ENST00000369553 ZNF853P0CG23 659 aa12.6□□□□□ -0.39
HIPK1-203ENST00000369553 SETQ01105 290 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms