RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 MPRIPQ6WCQ1 1025 aa14.18□□□□□ -0.14
RAB39B-201ENST00000369454 USP26Q9BXU7 913 aa14.18□□□□□ -0.14
RAB39B-201ENST00000369454 PDE1AP54750 535 aa14.18□□□□□ -0.14
RAB39B-201ENST00000369454 KDRP35968 1356 aa14.18□□□□□ -0.14
RAB39B-201ENST00000369454 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
RAB39B-201ENST00000369454 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
RAB39B-201ENST00000369454 TOPAZ1Q8N9V7 1692 aa14.16□□□□□ -0.14
RAB39B-201ENST00000369454 MAP3K5Q99683 1374 aa14.16□□□□□ -0.14
RAB39B-201ENST00000369454 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
RAB39B-201ENST00000369454 NUTM1Q86Y26 1132 aa14.16□□□□□ -0.14
RAB39B-201ENST00000369454 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
RAB39B-201ENST00000369454 DDX11L8A8MPP1 907 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 UBTFL1P0CB47 393 aaPredicted RBP14.15□□□□□ -0.14
RAB39B-201ENST00000369454 PKP1Q13835 747 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 GBP4Q96PP9 640 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 NCLP19338 710 aaKnown RBP14.15□□□□□ -0.14
RAB39B-201ENST00000369454 DDIT3P35638 169 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 TEFQ10587 303 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 CHAMP1Q96JM3 812 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
RAB39B-201ENST00000369454 GNAI3P08754 354 aa14.14□□□□□ -0.15
RAB39B-201ENST00000369454 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
RAB39B-201ENST00000369454 L1TD1Q5T7N2 865 aaKnown RBP14.14□□□□□ -0.15
RAB39B-201ENST00000369454 ZNF530Q6P9A1 599 aaPredicted RBP14.14□□□□□ -0.15
RAB39B-201ENST00000369454 ZGPATQ8N5A5 531 aaKnown RBP14.14□□□□□ -0.15
RAB39B-201ENST00000369454 PIK3C2AO00443 1686 aa14.14□□□□□ -0.15
RAB39B-201ENST00000369454 RABEP1Q15276 862 aa14.14□□□□□ -0.15
RAB39B-201ENST00000369454 USP44Q9H0E7 712 aa14.14□□□□□ -0.15
RAB39B-201ENST00000369454 ANO2Q9NQ90 1003 aa14.14□□□□□ -0.15
RAB39B-201ENST00000369454 SURF6O75683 361 aaKnown RBP14.14□□□□□ -0.15
RAB39B-201ENST00000369454 ERC2O15083 957 aa14.13□□□□□ -0.15
RAB39B-201ENST00000369454 MX1P20591 662 aa14.13□□□□□ -0.15
RAB39B-201ENST00000369454 ARHGAP23Q9P227 1491 aa14.13□□□□□ -0.15
RAB39B-201ENST00000369454 UNC5CLQ8IV45 518 aa14.13□□□□□ -0.15
RAB39B-201ENST00000369454 AK9Q5TCS8 1911 aa14.13□□□□□ -0.15
RAB39B-201ENST00000369454 PI4KAP2A4QPH2 592 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 REC8O95072 547 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 NBPF7P0C2Y1 421 aaPredicted RBP14.12□□□□□ -0.15
RAB39B-201ENST00000369454 PI4KAP1Q8N8J0 262 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 SLIT1O75093 1534 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 NEK4P51957 841 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 NALCNQ8IZF0 1738 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 BTBD11A6QL63 1104 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 ATP8B2P98198 1209 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 FOXD4L6Q3SYB3 417 aaPredicted RBP14.12□□□□□ -0.15
RAB39B-201ENST00000369454 FOXD4L3Q6VB84 417 aaPredicted RBP14.12□□□□□ -0.15
RAB39B-201ENST00000369454 PPP1R42Q7Z4L9 355 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 IP6K1Q92551 441 aa14.12□□□□□ -0.15
RAB39B-201ENST00000369454 MCTP1Q6DN14 999 aa14.11□□□□□ -0.15
RAB39B-201ENST00000369454 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
RAB39B-201ENST00000369454 NCOA3Q9Y6Q9 1424 aa14.11□□□□□ -0.15
RAB39B-201ENST00000369454 PRAMEF22A3QJZ6 481 aa14.11□□□□□ -0.15
RAB39B-201ENST00000369454 SRGAP3O43295 1099 aa14.11□□□□□ -0.15
RAB39B-201ENST00000369454 HTATSF1O43719 755 aaKnown RBP14.11□□□□□ -0.15
RAB39B-201ENST00000369454 ZC3H6P61129 1189 aaKnown RBP14.11□□□□□ -0.15
RAB39B-201ENST00000369454 ST18O60284 1047 aa14.11□□□□□ -0.15
RAB39B-201ENST00000369454 SRCIN1Q9C0H9 1055 aa14.11□□□□□ -0.15
RAB39B-201ENST00000369454 TPRNQ4KMQ1 711 aa14.1□□□□□ -0.15
RAB39B-201ENST00000369454 AIMP1Q12904 312 aaKnown RBP14.1□□□□□ -0.15
RAB39B-201ENST00000369454 OS9Q13438 667 aaPredicted RBP14.1□□□□□ -0.15
RAB39B-201ENST00000369454 UPF3BQ9BZI7 483 aaKnown RBP14.1□□□□□ -0.15
RAB39B-201ENST00000369454 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
RAB39B-201ENST00000369454 FER1L4A9Z1Z3 1794 aa14.1□□□□□ -0.15
RAB39B-201ENST00000369454 PALD1Q9ULE6 856 aa14.1□□□□□ -0.15
RAB39B-201ENST00000369454 DDX49Q9Y6V7 483 aaKnown RBP14.1□□□□□ -0.15
RAB39B-201ENST00000369454 FMN2Q9NZ56 1722 aa14.09□□□□□ -0.15
RAB39B-201ENST00000369454 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
RAB39B-201ENST00000369454 GCP02774 474 aa14.09□□□□□ -0.15
RAB39B-201ENST00000369454 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
RAB39B-201ENST00000369454 GAS2L3Q86XJ1 694 aa14.08□□□□□ -0.15
RAB39B-201ENST00000369454 DTNBO60941 627 aa14.08□□□□□ -0.16
RAB39B-201ENST00000369454 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
RAB39B-201ENST00000369454 C1orf141Q5JVX7 400 aa14.08□□□□□ -0.16
RAB39B-201ENST00000369454 GOLGA6L22H0YM25 854 aa14.08□□□□□ -0.16
RAB39B-201ENST00000369454 PROSER3Q2NL68 480 aa14.07□□□□□ -0.16
RAB39B-201ENST00000369454 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
RAB39B-201ENST00000369454 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
RAB39B-201ENST00000369454 IL25Q9H293 177 aa14.07□□□□□ -0.16
RAB39B-201ENST00000369454 AXIN2Q9Y2T1 843 aa14.07□□□□□ -0.16
RAB39B-201ENST00000369454 DNAAF4Q8WXU2 420 aa14.07□□□□□ -0.16
RAB39B-201ENST00000369454 GRPEL1Q9HAV7 217 aa14.07□□□□□ -0.16
RAB39B-201ENST00000369454 FSD2A1L4K1 749 aa14.06□□□□□ -0.16
RAB39B-201ENST00000369454 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
RAB39B-201ENST00000369454 ANKARQ7Z5J8 1434 aa14.06□□□□□ -0.16
RAB39B-201ENST00000369454 CHMLP26374 656 aa14.06□□□□□ -0.16
RAB39B-201ENST00000369454 CWF19L2Q2TBE0 894 aaKnown RBP14.06□□□□□ -0.16
RAB39B-201ENST00000369454 SOS1Q07889 1333 aaPredicted RBP14.06□□□□□ -0.16
RAB39B-201ENST00000369454 IBTKQ9P2D0 1353 aaPredicted RBP14.06□□□□□ -0.16
RAB39B-201ENST00000369454 SLC39A6Q13433 755 aa14.06□□□□□ -0.16
RAB39B-201ENST00000369454 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
RAB39B-201ENST00000369454 C9orf78Q9NZ63 289 aaPredicted RBP14.06□□□□□ -0.16
RAB39B-201ENST00000369454 PIP4K2AP48426 406 aaPredicted RBP14.05□□□□□ -0.16
RAB39B-201ENST00000369454 OSBPL3Q9H4L5 887 aa14.05□□□□□ -0.16
RAB39B-201ENST00000369454 RRAGDQ9NQL2 400 aaPredicted RBP14.05□□□□□ -0.16
RAB39B-201ENST00000369454 PA2G4Q9UQ80 394 aaKnown RBP14.05□□□□□ -0.16
RAB39B-201ENST00000369454 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
RAB39B-201ENST00000369454 KCNH5Q8NCM2 988 aa14.05□□□□□ -0.16
RAB39B-201ENST00000369454 RHPN1Q8TCX5 695 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms