RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 FAM182BQ5T319 152 aa32.73■■■□□ 2.83
NSMCE4A-201ENST00000369017 THUMPD2Q9BTF0 503 aaKnown RBP32.73■■■□□ 2.83
NSMCE4A-201ENST00000369017 ACSBG1Q96GR2 724 aa32.72■■■□□ 2.83
NSMCE4A-201ENST00000369017 TOGARAM1Q9Y4F4 1720 aa32.71■■■□□ 2.83
NSMCE4A-201ENST00000369017 BTBD11A6QL63 1104 aa32.71■■■□□ 2.83
NSMCE4A-201ENST00000369017 BCL11BQ9C0K0 894 aaPredicted RBP32.71■■■□□ 2.83
NSMCE4A-201ENST00000369017 MYH16Q9H6N6 1097 aa32.71■■■□□ 2.83
NSMCE4A-201ENST00000369017 ITGB4P16144 1822 aa32.7■■■□□ 2.83
NSMCE4A-201ENST00000369017 NHSQ6T4R5 1651 aa32.7■■■□□ 2.83
NSMCE4A-201ENST00000369017 E9PSI1 815 aa32.7■■■□□ 2.83
NSMCE4A-201ENST00000369017 LAS1LQ9Y4W2 734 aaKnown RBP32.7■■■□□ 2.83
NSMCE4A-201ENST00000369017 SBF2Q86WG5 1849 aa32.69■■■□□ 2.82
NSMCE4A-201ENST00000369017 SIPA1L3O60292 1781 aaPredicted RBP32.68■■■□□ 2.82
NSMCE4A-201ENST00000369017 TTC5Q8N0Z6 440 aa32.68■■■□□ 2.82
NSMCE4A-201ENST00000369017 PIGBQ92521 554 aa32.67■■■□□ 2.82
NSMCE4A-201ENST00000369017 SMARCC1Q92922 1105 aaPredicted RBP32.67■■■□□ 2.82
NSMCE4A-201ENST00000369017 TSPYL4Q9UJ04 414 aa32.67■■■□□ 2.82
NSMCE4A-201ENST00000369017 CHL1O00533 1208 aa32.66■■■□□ 2.82
NSMCE4A-201ENST00000369017 ZNF853P0CG23 659 aa32.64■■■□□ 2.82
NSMCE4A-201ENST00000369017 HMGB2P26583 209 aaKnown RBP32.63■■■□□ 2.81
NSMCE4A-201ENST00000369017 KCNQ2O43526 872 aa32.62■■■□□ 2.81
NSMCE4A-201ENST00000369017 TRIM37O94972 964 aa32.62■■■□□ 2.81
NSMCE4A-201ENST00000369017 ZNF790Q6PG37 636 aa32.62■■■□□ 2.81
NSMCE4A-201ENST00000369017 SF3B2Q13435 895 aaKnown RBP32.61■■■□□ 2.81
NSMCE4A-201ENST00000369017 CCDC125Q86Z20 511 aa32.61■■■□□ 2.81
NSMCE4A-201ENST00000369017 SLFN5Q08AF3 891 aa32.6■■■□□ 2.81
NSMCE4A-201ENST00000369017 MBIPQ9NS73 344 aa32.58■■■□□ 2.81
NSMCE4A-201ENST00000369017 FMNL2Q96PY5 1086 aa32.57■■■□□ 2.8
NSMCE4A-201ENST00000369017 CHMP4AQ9BY43 222 aa32.57■■■□□ 2.8
NSMCE4A-201ENST00000369017 ATG3Q9NT62 314 aa32.57■■■□□ 2.8
NSMCE4A-201ENST00000369017 KDM3BQ7LBC6 1761 aa32.57■■■□□ 2.8
NSMCE4A-201ENST00000369017 BTAF1O14981 1849 aa32.56■■■□□ 2.8
NSMCE4A-201ENST00000369017 MIS18AQ9NYP9 233 aa32.56■■■□□ 2.8
NSMCE4A-201ENST00000369017 ASAP1Q9ULH1 1129 aa32.55■■■□□ 2.8
NSMCE4A-201ENST00000369017 PAPPAQ13219 1627 aa32.55■■■□□ 2.8
NSMCE4A-201ENST00000369017 SLC39A6Q13433 755 aa32.54■■■□□ 2.8
NSMCE4A-201ENST00000369017 SOS1Q07889 1333 aaPredicted RBP32.53■■■□□ 2.8
NSMCE4A-201ENST00000369017 FANCIQ9NVI1 1328 aa32.53■■■□□ 2.8
NSMCE4A-201ENST00000369017 PALLDQ8WX93 1383 aa32.53■■■□□ 2.8
NSMCE4A-201ENST00000369017 TRMT2AQ8IZ69 625 aaKnown RBP32.52■■■□□ 2.8
NSMCE4A-201ENST00000369017 VSIG10Q8N0Z9 540 aa32.52■■■□□ 2.8
NSMCE4A-201ENST00000369017 CDCA7LQ96GN5 454 aa32.52■■■□□ 2.8
NSMCE4A-201ENST00000369017 PLSCR1O15162 318 aa32.51■■■□□ 2.79
NSMCE4A-201ENST00000369017 APBA3O96018 575 aa32.51■■■□□ 2.79
NSMCE4A-201ENST00000369017 EIF4A1P60842 406 aaKnown RBP32.51■■■□□ 2.79
NSMCE4A-201ENST00000369017 TSR2Q969E8 191 aaKnown RBP32.51■■■□□ 2.79
NSMCE4A-201ENST00000369017 TEX13AQ9BXU3 409 aaPredicted RBP32.51■■■□□ 2.79
NSMCE4A-201ENST00000369017 SPINK5Q9NQ38 1064 aaPredicted RBP32.5■■■□□ 2.79
NSMCE4A-201ENST00000369017 RBM42Q9BTD8 480 aaKnown RBP32.49■■■□□ 2.79
NSMCE4A-201ENST00000369017 UBR2Q8IWV8 1755 aa32.49■■■□□ 2.79
NSMCE4A-201ENST00000369017 PTCD1O75127 700 aaKnown RBP32.48■■■□□ 2.79
NSMCE4A-201ENST00000369017 HOXB7P09629 217 aa32.48■■■□□ 2.79
NSMCE4A-201ENST00000369017 SNRPA1P09661 255 aaKnown RBP32.48■■■□□ 2.79
NSMCE4A-201ENST00000369017 BAG6P46379 1132 aa32.47■■■□□ 2.79
NSMCE4A-201ENST00000369017 DUSP27Q5VZP5 1158 aa32.47■■■□□ 2.79
NSMCE4A-201ENST00000369017 ZNF496Q96IT1 587 aaPredicted RBP32.47■■■□□ 2.79
NSMCE4A-201ENST00000369017 HEG1Q9ULI3 1381 aa32.46■■■□□ 2.79
NSMCE4A-201ENST00000369017 CT47B1P0C2W7 299 aaPredicted RBP32.46■■■□□ 2.79
NSMCE4A-201ENST00000369017 TNS1Q9HBL0 1735 aaKnown RBP32.46■■■□□ 2.79
NSMCE4A-201ENST00000369017 LOC102724428A0A0B4J2F2 783 aa32.45■■■□□ 2.79
NSMCE4A-201ENST00000369017 KCNQ3O43525 872 aa32.45■■■□□ 2.79
NSMCE4A-201ENST00000369017 SIK1P57059 783 aa32.45■■■□□ 2.79
NSMCE4A-201ENST00000369017 PTF1AQ7RTS3 328 aa32.45■■■□□ 2.79
NSMCE4A-201ENST00000369017 SLC27A3Q5K4L6 730 aa32.44■■■□□ 2.78
NSMCE4A-201ENST00000369017 KCPQ6ZWJ8 1503 aa32.44■■■□□ 2.78
NSMCE4A-201ENST00000369017 ZNF831Q5JPB2 1677 aa32.43■■■□□ 2.78
NSMCE4A-201ENST00000369017 RGPD3A6NKT7 1758 aaPredicted RBP32.42■■■□□ 2.78
NSMCE4A-201ENST00000369017 RGPD4Q7Z3J3 1758 aa32.42■■■□□ 2.78
NSMCE4A-201ENST00000369017 EXOSC9Q06265 439 aaKnown RBP32.42■■■□□ 2.78
NSMCE4A-201ENST00000369017 ZNF428Q96B54 188 aa32.42■■■□□ 2.78
NSMCE4A-201ENST00000369017 LY75O60449 1722 aa32.41■■■□□ 2.78
NSMCE4A-201ENST00000369017 GIGYF1O75420 1035 aaPredicted RBP32.41■■■□□ 2.78
NSMCE4A-201ENST00000369017 ATP6V1AP38606 617 aa32.41■■■□□ 2.78
NSMCE4A-201ENST00000369017 TWISTNBQ3B726 338 aaPredicted RBP32.41■■■□□ 2.78
NSMCE4A-201ENST00000369017 STARD3NLO95772 234 aa32.4■■■□□ 2.78
NSMCE4A-201ENST00000369017 CCNL1Q9UK58 526 aaPredicted RBP32.4■■■□□ 2.78
NSMCE4A-201ENST00000369017 C8orf58Q8NAV2 365 aa32.37■■■□□ 2.77
NSMCE4A-201ENST00000369017 CICQ96RK0 1608 aaPredicted RBP32.37■■■□□ 2.77
NSMCE4A-201ENST00000369017 EP400Q96L91 3159 aa32.35■■■□□ 2.77
NSMCE4A-201ENST00000369017 TXNRD1Q16881 649 aa32.35■■■□□ 2.77
NSMCE4A-201ENST00000369017 ELL2O00472 640 aaPredicted RBP32.34■■■□□ 2.77
NSMCE4A-201ENST00000369017 CCDC30Q5VVM6 783 aa32.34■■■□□ 2.77
NSMCE4A-201ENST00000369017 ILDR2Q71H61 639 aa32.33■■■□□ 2.77
NSMCE4A-201ENST00000369017 VAMP4O75379 141 aa32.32■■■□□ 2.76
NSMCE4A-201ENST00000369017 HDGFL1Q5TGJ6 251 aa32.32■■■□□ 2.76
NSMCE4A-201ENST00000369017 UPF1Q92900 1129 aaKnown RBP eCLIP32.32■■■□□ 2.76
NSMCE4A-201ENST00000369017 LAMB4A4D0S4 1761 aa32.32■■■□□ 2.76
NSMCE4A-201ENST00000369017 ERBB4Q15303 1308 aa32.31■■■□□ 2.76
NSMCE4A-201ENST00000369017 KRT24Q2M2I5 525 aa32.31■■■□□ 2.76
NSMCE4A-201ENST00000369017 TSPYL6Q8N831 410 aa32.31■■■□□ 2.76
NSMCE4A-201ENST00000369017 STK31Q9BXU1 1019 aa32.31■■■□□ 2.76
NSMCE4A-201ENST00000369017 DNAJC10Q8IXB1 793 aa32.3■■■□□ 2.76
NSMCE4A-201ENST00000369017 EIF2S2P20042 333 aaKnown RBP32.29■■■□□ 2.76
NSMCE4A-201ENST00000369017 EN1Q05925 392 aaPredicted RBP32.29■■■□□ 2.76
NSMCE4A-201ENST00000369017 SLC4A9Q96Q91 983 aa32.29■■■□□ 2.76
NSMCE4A-201ENST00000369017 CAMKK2Q96RR4 588 aa32.29■■■□□ 2.76
NSMCE4A-201ENST00000369017 USP16Q9Y5T5 823 aa32.29■■■□□ 2.76
NSMCE4A-201ENST00000369017 NPM2Q86SE8 214 aaKnown RBP32.28■■■□□ 2.76
NSMCE4A-201ENST00000369017 TJP1Q07157 1748 aa32.27■■■□□ 2.76
NSMCE4A-201ENST00000369017 CYP19A1P11511 503 aaPredicted RBP32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms