RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
TPM3-213ENST00000368545 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
TPM3-213ENST00000368545 CALR3Q96L12 384 aaKnown RBP11.93□□□□□ -0.5
TPM3-213ENST00000368545 EPAS1Q99814 870 aa11.93□□□□□ -0.5
TPM3-213ENST00000368545 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 CCER2I3L3R5 266 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 CDCA8Q53HL2 280 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
TPM3-213ENST00000368545 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 POM121CA8CG34 1229 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 FAM196AQ6ZSG2 479 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 CAMKK2Q96RR4 588 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 NRXN3Q9Y4C0 1643 aa11.92□□□□□ -0.5
TPM3-213ENST00000368545 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
TPM3-213ENST00000368545 OATP04181 439 aa11.91□□□□□ -0.5
TPM3-213ENST00000368545 PPP2R2DQ66LE6 453 aa11.91□□□□□ -0.5
TPM3-213ENST00000368545 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
TPM3-213ENST00000368545 PCDHGA10Q9Y5H3 936 aa11.91□□□□□ -0.5
TPM3-213ENST00000368545 GLMNQ92990 594 aa11.9□□□□□ -0.5
TPM3-213ENST00000368545 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
TPM3-213ENST00000368545 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
TPM3-213ENST00000368545 PSME1Q06323 249 aa11.89□□□□□ -0.51
TPM3-213ENST00000368545 ARHGEF10O15013 1369 aa11.89□□□□□ -0.51
TPM3-213ENST00000368545 CENPJQ9HC77 1338 aaPredicted RBP11.89□□□□□ -0.51
TPM3-213ENST00000368545 ABL2P42684 1182 aa11.89□□□□□ -0.51
TPM3-213ENST00000368545 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
TPM3-213ENST00000368545 MAP3K5Q99683 1374 aa11.88□□□□□ -0.51
TPM3-213ENST00000368545 DLC1Q96QB1 1528 aa11.88□□□□□ -0.51
TPM3-213ENST00000368545 MYOM1P52179 1685 aa11.88□□□□□ -0.51
TPM3-213ENST00000368545 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
TPM3-213ENST00000368545 ADGRG1Q9Y653 693 aa11.88□□□□□ -0.51
TPM3-213ENST00000368545 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
TPM3-213ENST00000368545 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
TPM3-213ENST00000368545 RBM25P49756 843 aaKnown RBP11.87□□□□□ -0.51
TPM3-213ENST00000368545 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
TPM3-213ENST00000368545 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
TPM3-213ENST00000368545 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
TPM3-213ENST00000368545 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
TPM3-213ENST00000368545 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
TPM3-213ENST00000368545 COL14A1Q05707 1796 aaKnown RBP11.86□□□□□ -0.51
TPM3-213ENST00000368545 KTN1Q86UP2 1357 aaKnown RBP11.86□□□□□ -0.51
TPM3-213ENST00000368545 IER5LQ5T953 404 aa11.86□□□□□ -0.51
TPM3-213ENST00000368545 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
TPM3-213ENST00000368545 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
TPM3-213ENST00000368545 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
TPM3-213ENST00000368545 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
TPM3-213ENST00000368545 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
TPM3-213ENST00000368545 TMEM132EQ6IEE7 984 aa11.85□□□□□ -0.51
TPM3-213ENST00000368545 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
TPM3-213ENST00000368545 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
TPM3-213ENST00000368545 PRKRIP1Q9H875 184 aaPredicted RBP11.85□□□□□ -0.51
TPM3-213ENST00000368545 NRAPQ86VF7 1730 aa11.85□□□□□ -0.51
TPM3-213ENST00000368545 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
TPM3-213ENST00000368545 SLC34A2O95436 690 aa11.84□□□□□ -0.51
TPM3-213ENST00000368545 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
TPM3-213ENST00000368545 TNS3Q68CZ2 1445 aa11.84□□□□□ -0.51
TPM3-213ENST00000368545 PLCG2P16885 1265 aa11.83□□□□□ -0.52
TPM3-213ENST00000368545 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.52
TPM3-213ENST00000368545 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
TPM3-213ENST00000368545 AATKQ6ZMQ8 1374 aa11.83□□□□□ -0.52
TPM3-213ENST00000368545 METP08581 1390 aa11.82□□□□□ -0.52
TPM3-213ENST00000368545 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
TPM3-213ENST00000368545 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
TPM3-213ENST00000368545 A0A0G2JS52 829 aa11.81□□□□□ -0.52
TPM3-213ENST00000368545 ATMINO43313 823 aaPredicted RBP11.81□□□□□ -0.52
TPM3-213ENST00000368545 MYT1Q01538 1121 aa11.81□□□□□ -0.52
TPM3-213ENST00000368545 PDE4CQ08493 712 aa11.81□□□□□ -0.52
TPM3-213ENST00000368545 CASZ1Q86V15 1759 aa11.81□□□□□ -0.52
TPM3-213ENST00000368545 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
TPM3-213ENST00000368545 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
TPM3-213ENST00000368545 APBA3O96018 575 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 ABCC11Q96J66 1382 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 TECPR2O15040 1411 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 NRKQ7Z2Y5 1582 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 PBXIP1Q96AQ6 731 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
TPM3-213ENST00000368545 ABCA3Q99758 1704 aa11.79□□□□□ -0.52
TPM3-213ENST00000368545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.79□□□□□ -0.52
TPM3-213ENST00000368545 RALBP1Q15311 655 aa11.79□□□□□ -0.52
TPM3-213ENST00000368545 QPCTQ16769 361 aa11.79□□□□□ -0.52
TPM3-213ENST00000368545 PER1O15534 1290 aaPredicted RBP11.78□□□□□ -0.52
TPM3-213ENST00000368545 IGSF3O75054 1194 aa11.78□□□□□ -0.52
TPM3-213ENST00000368545 PANK3Q9H999 370 aa11.78□□□□□ -0.52
TPM3-213ENST00000368545 CAMTA1Q9Y6Y1 1673 aa11.78□□□□□ -0.52
TPM3-213ENST00000368545 HSPA6P17066 643 aa11.78□□□□□ -0.52
TPM3-213ENST00000368545 RFX1P22670 979 aa11.78□□□□□ -0.52
TPM3-213ENST00000368545 TTC13Q8NBP0 860 aa11.78□□□□□ -0.52
TPM3-213ENST00000368545 ADAMTS19Q8TE59 1207 aa11.78□□□□□ -0.52
TPM3-213ENST00000368545 SPTLC1O15269 473 aa11.77□□□□□ -0.52
TPM3-213ENST00000368545 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.52
TPM3-213ENST00000368545 STK26Q9P289 416 aa11.77□□□□□ -0.52
TPM3-213ENST00000368545 CARNS1A5YM72 827 aa11.77□□□□□ -0.53
TPM3-213ENST00000368545 BRD1O95696 1058 aa11.77□□□□□ -0.53
TPM3-213ENST00000368545 TUSC1Q2TAM9 212 aa11.77□□□□□ -0.53
TPM3-213ENST00000368545 RSBN1LQ6PCB5 846 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms