RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 VIRMAQ69YN4 1812 aaKnown RBP16.65■□□□□ 0.26
EFNA1-201ENST00000368406 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
EFNA1-201ENST00000368406 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
EFNA1-201ENST00000368406 APAF1O14727 1248 aa16.64■□□□□ 0.25
EFNA1-201ENST00000368406 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
EFNA1-201ENST00000368406 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
EFNA1-201ENST00000368406 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
EFNA1-201ENST00000368406 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
EFNA1-201ENST00000368406 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
EFNA1-201ENST00000368406 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
EFNA1-201ENST00000368406 SCN11AQ9UI33 1791 aa16.63■□□□□ 0.25
EFNA1-201ENST00000368406 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
EFNA1-201ENST00000368406 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
EFNA1-201ENST00000368406 RIPK4P57078 832 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 STK32BQ9NY57 414 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 ASAP1Q9ULH1 1129 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
EFNA1-201ENST00000368406 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
EFNA1-201ENST00000368406 ADAMTS7Q9UKP4 1686 aa16.61■□□□□ 0.25
EFNA1-201ENST00000368406 MRC1P22897 1456 aa16.6■□□□□ 0.25
EFNA1-201ENST00000368406 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
EFNA1-201ENST00000368406 SIK1P57059 783 aa16.6■□□□□ 0.25
EFNA1-201ENST00000368406 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
EFNA1-201ENST00000368406 KCNQ4P56696 695 aa16.59■□□□□ 0.25
EFNA1-201ENST00000368406 AKT1S1Q96B36 256 aa16.59■□□□□ 0.25
EFNA1-201ENST00000368406 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.247e-6■□□□□ 8.2
EFNA1-201ENST00000368406 IL17REQ8NFR9 667 aa16.58■□□□□ 0.24
EFNA1-201ENST00000368406 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
EFNA1-201ENST00000368406 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
EFNA1-201ENST00000368406 MCM10Q7L590 875 aa16.57■□□□□ 0.24
EFNA1-201ENST00000368406 TEFQ10587 303 aa16.56■□□□□ 0.24
EFNA1-201ENST00000368406 YTHDC1Q96MU7 727 aaKnown RBP16.56■□□□□ 0.24
EFNA1-201ENST00000368406 ZNF831Q5JPB2 1677 aa16.56■□□□□ 0.24
EFNA1-201ENST00000368406 DCTN1Q14203 1278 aa16.55■□□□□ 0.24
EFNA1-201ENST00000368406 TAF1LQ8IZX4 1826 aa16.55■□□□□ 0.24
EFNA1-201ENST00000368406 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
EFNA1-201ENST00000368406 TFCP2L1Q9NZI6 479 aa16.54■□□□□ 0.24
EFNA1-201ENST00000368406 C5P01031 1676 aa16.54■□□□□ 0.24
EFNA1-201ENST00000368406 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
EFNA1-201ENST00000368406 NGEFQ8N5V2 710 aa16.53■□□□□ 0.24
EFNA1-201ENST00000368406 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
EFNA1-201ENST00000368406 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
EFNA1-201ENST00000368406 ITPK1Q13572 414 aa16.53■□□□□ 0.24
EFNA1-201ENST00000368406 SLC4A9Q96Q91 983 aa16.53■□□□□ 0.24
EFNA1-201ENST00000368406 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
EFNA1-201ENST00000368406 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
EFNA1-201ENST00000368406 CASZ1Q86V15 1759 aa16.52■□□□□ 0.24
EFNA1-201ENST00000368406 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.23
EFNA1-201ENST00000368406 PTCD1O75127 700 aaKnown RBP16.52■□□□□ 0.23
EFNA1-201ENST00000368406 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.23
EFNA1-201ENST00000368406 PDGFDQ9GZP0 370 aaPredicted RBP16.52■□□□□ 0.23
EFNA1-201ENST00000368406 LAS1LQ9Y4W2 734 aaKnown RBP16.52■□□□□ 0.23
EFNA1-201ENST00000368406 C4BP0C0L5 1744 aa16.51■□□□□ 0.23
EFNA1-201ENST00000368406 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
EFNA1-201ENST00000368406 FLAD1Q8NFF5 587 aa16.51■□□□□ 0.23
EFNA1-201ENST00000368406 LRP5O75197 1615 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
EFNA1-201ENST00000368406 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 WWC1Q8IX03 1113 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 AK7Q96M32 723 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 SPON1Q9HCB6 807 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
EFNA1-201ENST00000368406 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
EFNA1-201ENST00000368406 TTC5Q8N0Z6 440 aa16.49■□□□□ 0.23
EFNA1-201ENST00000368406 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
EFNA1-201ENST00000368406 MTFR1LQ9H019 292 aa16.49■□□□□ 0.23
EFNA1-201ENST00000368406 CICQ96RK0 1608 aaPredicted RBP16.48■□□□□ 0.23
EFNA1-201ENST00000368406 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
EFNA1-201ENST00000368406 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
EFNA1-201ENST00000368406 TUBGCP6Q96RT7 1819 aa16.48■□□□□ 0.23
EFNA1-201ENST00000368406 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
EFNA1-201ENST00000368406 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
EFNA1-201ENST00000368406 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
EFNA1-201ENST00000368406 COL5A3P25940 1745 aaPredicted RBP16.47■□□□□ 0.23
EFNA1-201ENST00000368406 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
EFNA1-201ENST00000368406 SSFA2P28290 1259 aa16.46■□□□□ 0.23
EFNA1-201ENST00000368406 COL23A1Q86Y22 540 aaPredicted RBP16.46■□□□□ 0.23
EFNA1-201ENST00000368406 TSPYL4Q9UJ04 414 aa16.46■□□□□ 0.23
EFNA1-201ENST00000368406 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.23
EFNA1-201ENST00000368406 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.23
EFNA1-201ENST00000368406 GNAI1P63096 354 aa16.45■□□□□ 0.22
EFNA1-201ENST00000368406 WDR63Q8IWG1 891 aa16.45■□□□□ 0.22
EFNA1-201ENST00000368406 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
EFNA1-201ENST00000368406 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
EFNA1-201ENST00000368406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
EFNA1-201ENST00000368406 GNPATO15228 680 aa16.45■□□□□ 0.22
EFNA1-201ENST00000368406 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
EFNA1-201ENST00000368406 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
EFNA1-201ENST00000368406 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
EFNA1-201ENST00000368406 ADRA2BP18089 450 aa16.44■□□□□ 0.22
EFNA1-201ENST00000368406 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
EFNA1-201ENST00000368406 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
EFNA1-201ENST00000368406 AMIGO3Q86WK7 504 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms