RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
THBS3-201ENST00000368378 ST18O60284 1047 aa10.86□□□□□ -0.67
THBS3-201ENST00000368378 ANKLE2Q86XL3 938 aa10.86□□□□□ -0.67
THBS3-201ENST00000368378 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
THBS3-201ENST00000368378 ARHGAP45Q92619 1136 aa10.86□□□□□ -0.67
THBS3-201ENST00000368378 ABCC4O15439 1325 aa10.86□□□□□ -0.67
THBS3-201ENST00000368378 PALD1Q9ULE6 856 aa10.86□□□□□ -0.67
THBS3-201ENST00000368378 ZNF853P0CG23 659 aa10.85□□□□□ -0.67
THBS3-201ENST00000368378 CEP85Q6P2H3 762 aa10.85□□□□□ -0.67
THBS3-201ENST00000368378 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
THBS3-201ENST00000368378 RBSNQ9H1K0 784 aa10.85□□□□□ -0.67
THBS3-201ENST00000368378 OS9Q13438 667 aaPredicted RBP10.85□□□□□ -0.67
THBS3-201ENST00000368378 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 CLCN1P35523 988 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 ZSCAN23Q3MJ62 389 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 SNX21Q969T3 373 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 USP26Q9BXU7 913 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 EDC4Q6P2E9 1401 aaKnown RBP10.84□□□□□ -0.67
THBS3-201ENST00000368378 PNMA6EA0A0J9YXQ4 647 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 UNC5CLQ8IV45 518 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 STK31Q9BXU1 1019 aa10.84□□□□□ -0.67
THBS3-201ENST00000368378 A2ML1A8K2U0 1454 aa10.83□□□□□ -0.68
THBS3-201ENST00000368378 ATP7BP35670 1465 aa10.83□□□□□ -0.68
THBS3-201ENST00000368378 CPS1P31327 1500 aa10.83□□□□□ -0.68
THBS3-201ENST00000368378 DLG5Q8TDM6 1919 aa10.83□□□□□ -0.68
THBS3-201ENST00000368378 BRPF1P55201 1214 aaPredicted RBP10.83□□□□□ -0.68
THBS3-201ENST00000368378 C17orf53Q8N3J3 647 aaPredicted RBP10.83□□□□□ -0.68
THBS3-201ENST00000368378 TSC1Q92574 1164 aa10.83□□□□□ -0.68
THBS3-201ENST00000368378 PRR36Q9H6K5 1346 aa10.83□□□□□ -0.68
THBS3-201ENST00000368378 DCTPP1Q9H773 170 aa10.83□□□□□ -0.68
THBS3-201ENST00000368378 NAP1L2Q9ULW6 460 aaPredicted RBP10.83□□□□□ -0.68
THBS3-201ENST00000368378 LRRFIP2Q9Y608 721 aaKnown RBP10.83□□□□□ -0.68
THBS3-201ENST00000368378 RABEP1Q15276 862 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 MTHFSDQ2M296 383 aaKnown RBP10.82□□□□□ -0.68
THBS3-201ENST00000368378 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 C3P01024 1663 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 GPT2Q8TD30 523 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 TCEANC2Q96MN5 208 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 SPG7Q9UQ90 795 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 SURF6O75683 361 aaKnown RBP10.82□□□□□ -0.68
THBS3-201ENST00000368378 FOSBP53539 338 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 NLRP6P59044 892 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 TMEM63CQ9P1W3 806 aa10.82□□□□□ -0.68
THBS3-201ENST00000368378 ACEP12821 1306 aa10.81□□□□□ -0.68
THBS3-201ENST00000368378 FIBPO43427 364 aa10.81□□□□□ -0.68
THBS3-201ENST00000368378 DDIT3P35638 169 aa10.81□□□□□ -0.68
THBS3-201ENST00000368378 PHAXQ9H814 394 aaKnown RBP10.81□□□□□ -0.68
THBS3-201ENST00000368378 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
THBS3-201ENST00000368378 ERC2O15083 957 aa10.81□□□□□ -0.68
THBS3-201ENST00000368378 SKOR2Q2VWA4 1001 aaPredicted RBP10.81□□□□□ -0.68
THBS3-201ENST00000368378 CWC27Q6UX04 472 aaKnown RBP10.81□□□□□ -0.68
THBS3-201ENST00000368378 ANKRD44Q8N8A2 993 aa10.81□□□□□ -0.68
THBS3-201ENST00000368378 TMX3Q96JJ7 454 aa10.81□□□□□ -0.68
THBS3-201ENST00000368378 GADD45BO75293 160 aaPredicted RBP10.8□□□□□ -0.68
THBS3-201ENST00000368378 PDE1AP54750 535 aa10.8□□□□□ -0.68
THBS3-201ENST00000368378 IL25Q9H293 177 aa10.8□□□□□ -0.68
THBS3-201ENST00000368378 CDK12Q9NYV4 1490 aaPredicted RBP10.8□□□□□ -0.68
THBS3-201ENST00000368378 PIK3R4Q99570 1358 aa10.8□□□□□ -0.68
THBS3-201ENST00000368378 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
THBS3-201ENST00000368378 REC8O95072 547 aa10.8□□□□□ -0.68
THBS3-201ENST00000368378 LMBRD1Q9NUN5 540 aa10.8□□□□□ -0.68
THBS3-201ENST00000368378 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
THBS3-201ENST00000368378 AIMP1Q12904 312 aaKnown RBP10.8□□□□□ -0.68
THBS3-201ENST00000368378 NCOA3Q9Y6Q9 1424 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 CDC42BPGQ6DT37 1551 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 HMMRO75330 724 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 KLHL40Q2TBA0 621 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 CIZ1Q9ULV3 898 aaPredicted RBP10.79□□□□□ -0.68
THBS3-201ENST00000368378 ZDHHC9Q9Y397 364 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 KCNJ4P48050 445 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 NUCB2P80303 420 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 FERMT3Q86UX7 667 aa10.79□□□□□ -0.68
THBS3-201ENST00000368378 HSP90B1P14625 803 aaKnown RBP10.78□□□□□ -0.68
THBS3-201ENST00000368378 AMOTL2Q9Y2J4 779 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 MAP3K19Q56UN5 1328 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 CHL1O00533 1208 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 KCNA6P17658 529 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 PIP4K2AP48426 406 aaPredicted RBP10.78□□□□□ -0.68
THBS3-201ENST00000368378 PIP4K2BP78356 416 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 PROSER2Q86WR7 435 aaPredicted RBP10.78□□□□□ -0.68
THBS3-201ENST00000368378 SIL1Q9H173 461 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 PRDM10Q9NQV6 1147 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 VPS37CA5D8V6 355 aaPredicted RBP10.78□□□□□ -0.68
THBS3-201ENST00000368378 GNAI2P04899 355 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 MX1P20591 662 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 FLIIQ13045 1269 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 FBXW7Q969H0 707 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 LRRCC1Q9C099 1032 aa10.78□□□□□ -0.68
THBS3-201ENST00000368378 KNDC1Q76NI1 1749 aa10.77□□□□□ -0.68
THBS3-201ENST00000368378 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.68
THBS3-201ENST00000368378 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.69
THBS3-201ENST00000368378 FAM173BQ6P4H8 233 aa10.77□□□□□ -0.69
THBS3-201ENST00000368378 RPAP2Q8IXW5 612 aaPredicted RBP10.77□□□□□ -0.69
THBS3-201ENST00000368378 SPC24Q8NBT2 197 aa10.77□□□□□ -0.69
THBS3-201ENST00000368378 ROBO2Q9HCK4 1378 aa10.77□□□□□ -0.69
THBS3-201ENST00000368378 TMEM2Q9UHN6 1383 aa10.77□□□□□ -0.69
THBS3-201ENST00000368378 SETD1BQ9UPS6 1966 aaKnown RBP10.77□□□□□ -0.69
THBS3-201ENST00000368378 RTL1A6NKG5 1358 aa10.77□□□□□ -0.69
THBS3-201ENST00000368378 SRGAP3O43295 1099 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms