RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 U2SURPO15042 1029 aaKnown RBP13.24□□□□□ -0.29
CD48-202ENST00000368046 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
CD48-202ENST00000368046 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
CD48-202ENST00000368046 PIGBQ92521 554 aa13.24□□□□□ -0.29
CD48-202ENST00000368046 DCAF5Q96JK2 942 aa13.24□□□□□ -0.29
CD48-202ENST00000368046 LRRC4BQ9NT99 713 aa13.24□□□□□ -0.29
CD48-202ENST00000368046 STK32BQ9NY57 414 aa13.24□□□□□ -0.29
CD48-202ENST00000368046 NUDCQ9Y266 331 aa13.24□□□□□ -0.29
CD48-202ENST00000368046 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
CD48-202ENST00000368046 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
CD48-202ENST00000368046 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
CD48-202ENST00000368046 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
CD48-202ENST00000368046 NHSQ6T4R5 1651 aa13.23□□□□□ -0.29
CD48-202ENST00000368046 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
CD48-202ENST00000368046 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
CD48-202ENST00000368046 RALBP1Q15311 655 aa13.21□□□□□ -0.29
CD48-202ENST00000368046 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.29
CD48-202ENST00000368046 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.29
CD48-202ENST00000368046 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.3
CD48-202ENST00000368046 CABP4P57796 275 aa13.2□□□□□ -0.3
CD48-202ENST00000368046 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
CD48-202ENST00000368046 RREB1Q92766 1687 aa13.2□□□□□ -0.3
CD48-202ENST00000368046 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
CD48-202ENST00000368046 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
CD48-202ENST00000368046 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
CD48-202ENST00000368046 KCNQ4P56696 695 aa13.19□□□□□ -0.3
CD48-202ENST00000368046 COL3A1P02461 1466 aaPredicted RBP13.18□□□□□ -0.3
CD48-202ENST00000368046 FCHSD2O94868 740 aa13.18□□□□□ -0.3
CD48-202ENST00000368046 U2AF1L5P0DN76 240 aaPredicted RBP13.18□□□□□ -0.3
CD48-202ENST00000368046 U2AF1Q01081 240 aaKnown RBP eCLIP13.18□□□□□ -0.3
CD48-202ENST00000368046 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
CD48-202ENST00000368046 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
CD48-202ENST00000368046 ASAP1Q9ULH1 1129 aa13.18□□□□□ -0.3
CD48-202ENST00000368046 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
CD48-202ENST00000368046 BTAF1O14981 1849 aa13.18□□□□□ -0.3
CD48-202ENST00000368046 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
CD48-202ENST00000368046 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
CD48-202ENST00000368046 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
CD48-202ENST00000368046 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
CD48-202ENST00000368046 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
CD48-202ENST00000368046 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
CD48-202ENST00000368046 RNMTO43148 476 aaKnown RBP13.16□□□□□ -0.3
CD48-202ENST00000368046 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
CD48-202ENST00000368046 PDGFDQ9GZP0 370 aaPredicted RBP13.16□□□□□ -0.3
CD48-202ENST00000368046 RSPH6AQ9H0K4 717 aa13.16□□□□□ -0.3
CD48-202ENST00000368046 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
CD48-202ENST00000368046 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
CD48-202ENST00000368046 DOT1LQ8TEK3 1739 aa13.16□□□□□ -0.3
CD48-202ENST00000368046 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.3
CD48-202ENST00000368046 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
CD48-202ENST00000368046 SIK1P57059 783 aa13.15□□□□□ -0.3
CD48-202ENST00000368046 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
CD48-202ENST00000368046 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
CD48-202ENST00000368046 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
CD48-202ENST00000368046 POTEMA6NI47 508 aa13.14□□□□□ -0.31
CD48-202ENST00000368046 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
CD48-202ENST00000368046 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
CD48-202ENST00000368046 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
CD48-202ENST00000368046 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
CD48-202ENST00000368046 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
CD48-202ENST00000368046 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
CD48-202ENST00000368046 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
CD48-202ENST00000368046 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
CD48-202ENST00000368046 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
CD48-202ENST00000368046 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
CD48-202ENST00000368046 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
CD48-202ENST00000368046 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
CD48-202ENST00000368046 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
CD48-202ENST00000368046 NEFMP07197 916 aa13.11□□□□□ -0.31
CD48-202ENST00000368046 ITPK1Q13572 414 aa13.11□□□□□ -0.31
CD48-202ENST00000368046 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
CD48-202ENST00000368046 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
CD48-202ENST00000368046 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
CD48-202ENST00000368046 PTCD1O75127 700 aaKnown RBP13.1□□□□□ -0.31
CD48-202ENST00000368046 COL23A1Q86Y22 540 aaPredicted RBP13.1□□□□□ -0.31
CD48-202ENST00000368046 LY75O60449 1722 aa13.1□□□□□ -0.31
CD48-202ENST00000368046 PTGER2P43116 358 aa13.09□□□□□ -0.31
CD48-202ENST00000368046 TEFQ10587 303 aa13.09□□□□□ -0.31
CD48-202ENST00000368046 RC3H1Q5TC82 1133 aaKnown RBP13.09□□□□□ -0.31
CD48-202ENST00000368046 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
CD48-202ENST00000368046 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
CD48-202ENST00000368046 AK7Q96M32 723 aa13.09□□□□□ -0.31
CD48-202ENST00000368046 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
CD48-202ENST00000368046 PPP1R1BQ9UD71 204 aaPredicted RBP13.09□□□□□ -0.31
CD48-202ENST00000368046 ITGB4P16144 1822 aa13.09□□□□□ -0.31
CD48-202ENST00000368046 MAP3K5Q99683 1374 aa13.08□□□□□ -0.31
CD48-202ENST00000368046 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
CD48-202ENST00000368046 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
CD48-202ENST00000368046 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
CD48-202ENST00000368046 PAPPAQ13219 1627 aa13.08□□□□□ -0.32
CD48-202ENST00000368046 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
CD48-202ENST00000368046 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
CD48-202ENST00000368046 SSFA2P28290 1259 aa13.06□□□□□ -0.32
CD48-202ENST00000368046 LRP5O75197 1615 aa13.06□□□□□ -0.32
CD48-202ENST00000368046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
CD48-202ENST00000368046 GNPATO15228 680 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 RPS6KA4O75676 772 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 POLD1P28340 1107 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
CD48-202ENST00000368046 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms