RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
NUP43-202ENST00000367402 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.3
NUP43-202ENST00000367402 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
NUP43-202ENST00000367402 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
NUP43-202ENST00000367402 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
NUP43-202ENST00000367402 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
NUP43-202ENST00000367402 NEFMP07197 916 aa13.13□□□□□ -0.31
NUP43-202ENST00000367402 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
NUP43-202ENST00000367402 PHACTR3Q96KR7 559 aa13.13□□□□□ -0.31
NUP43-202ENST00000367402 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
NUP43-202ENST00000367402 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
NUP43-202ENST00000367402 MPRIPQ6WCQ1 1025 aa13.12□□□□□ -0.31
NUP43-202ENST00000367402 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
NUP43-202ENST00000367402 EZH2Q15910 746 aaKnown RBP13.11□□□□□ -0.31
NUP43-202ENST00000367402 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
NUP43-202ENST00000367402 PLSCR1O15162 318 aa13.1□□□□□ -0.31
NUP43-202ENST00000367402 CABP4P57796 275 aa13.1□□□□□ -0.31
NUP43-202ENST00000367402 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
NUP43-202ENST00000367402 CAMKK2Q96RR4 588 aa13.1□□□□□ -0.31
NUP43-202ENST00000367402 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
NUP43-202ENST00000367402 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
NUP43-202ENST00000367402 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
NUP43-202ENST00000367402 ERVV-2B6SEH9 535 aa13.09□□□□□ -0.31
NUP43-202ENST00000367402 PIGBQ92521 554 aa13.09□□□□□ -0.31
NUP43-202ENST00000367402 SHANK3Q9BYB0 1731 aa13.09□□□□□ -0.31
NUP43-202ENST00000367402 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
NUP43-202ENST00000367402 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
NUP43-202ENST00000367402 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.32
NUP43-202ENST00000367402 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
NUP43-202ENST00000367402 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
NUP43-202ENST00000367402 LGR6Q9HBX8 967 aa13.08□□□□□ -0.32
NUP43-202ENST00000367402 RNMTO43148 476 aaKnown RBP13.07□□□□□ -0.32
NUP43-202ENST00000367402 DIEXFQ68CQ4 756 aaKnown RBP13.07□□□□□ -0.32
NUP43-202ENST00000367402 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
NUP43-202ENST00000367402 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
NUP43-202ENST00000367402 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
NUP43-202ENST00000367402 TXNRD1Q16881 649 aa13.06□□□□□ -0.32
NUP43-202ENST00000367402 PROM2Q8N271 834 aa13.06□□□□□ -0.32
NUP43-202ENST00000367402 RTF1Q92541 710 aaKnown RBP13.06□□□□□ -0.32
NUP43-202ENST00000367402 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
NUP43-202ENST00000367402 TNS1Q9HBL0 1735 aaKnown RBP13.05□□□□□ -0.32
NUP43-202ENST00000367402 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
NUP43-202ENST00000367402 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
NUP43-202ENST00000367402 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
NUP43-202ENST00000367402 GALR2O43603 387 aaPredicted RBP13.04□□□□□ -0.32
NUP43-202ENST00000367402 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
NUP43-202ENST00000367402 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
NUP43-202ENST00000367402 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
NUP43-202ENST00000367402 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
NUP43-202ENST00000367402 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
NUP43-202ENST00000367402 DOT1LQ8TEK3 1739 aa13.04□□□□□ -0.32
NUP43-202ENST00000367402 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
NUP43-202ENST00000367402 KCNQ4P56696 695 aa13.03□□□□□ -0.32
NUP43-202ENST00000367402 RIPK4P57078 832 aa13.03□□□□□ -0.32
NUP43-202ENST00000367402 TEFQ10587 303 aa13.03□□□□□ -0.32
NUP43-202ENST00000367402 NEUROD2Q15784 382 aa13.03□□□□□ -0.32
NUP43-202ENST00000367402 NBPF14Q5TI25 921 aa13.03□□□□□ -0.32
NUP43-202ENST00000367402 MCM10Q7L590 875 aa13.03□□□□□ -0.32
NUP43-202ENST00000367402 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
NUP43-202ENST00000367402 PALLDQ8WX93 1383 aa13.03□□□□□ -0.32
NUP43-202ENST00000367402 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
NUP43-202ENST00000367402 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
NUP43-202ENST00000367402 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
NUP43-202ENST00000367402 RRP7AQ9Y3A4 280 aaKnown RBP13.02□□□□□ -0.33
NUP43-202ENST00000367402 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
NUP43-202ENST00000367402 FAM9BQ8IZU0 186 aa13.01□□□□□ -0.33
NUP43-202ENST00000367402 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
NUP43-202ENST00000367402 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
NUP43-202ENST00000367402 BTAF1O14981 1849 aa13□□□□□ -0.33
NUP43-202ENST00000367402 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
NUP43-202ENST00000367402 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 APAF1O14727 1248 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
NUP43-202ENST00000367402 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 SIK1P57059 783 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
NUP43-202ENST00000367402 PSDA5PKW4 1024 aaPredicted RBP12.98□□□□□ -0.33
NUP43-202ENST00000367402 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
NUP43-202ENST00000367402 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
NUP43-202ENST00000367402 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
NUP43-202ENST00000367402 MIER1Q8N108 512 aa12.98□□□□□ -0.33
NUP43-202ENST00000367402 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
NUP43-202ENST00000367402 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
NUP43-202ENST00000367402 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
NUP43-202ENST00000367402 CCER2I3L3R5 266 aa12.97□□□□□ -0.33
NUP43-202ENST00000367402 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
NUP43-202ENST00000367402 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
NUP43-202ENST00000367402 SLC15A2Q16348 729 aa12.96□□□□□ -0.33
NUP43-202ENST00000367402 ZNF790Q6PG37 636 aa12.96□□□□□ -0.33
NUP43-202ENST00000367402 ANO8Q9HCE9 1232 aaPredicted RBP12.96□□□□□ -0.33
NUP43-202ENST00000367402 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.33
NUP43-202ENST00000367402 ITGB4P16144 1822 aa12.95□□□□□ -0.34
NUP43-202ENST00000367402 ITPK1Q13572 414 aa12.95□□□□□ -0.34
NUP43-202ENST00000367402 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
NUP43-202ENST00000367402 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
NUP43-202ENST00000367402 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
NUP43-202ENST00000367402 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms