RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 LTV1Q96GA3 475 aaPredicted RBP13.92□□□□□ -0.18
H3F3A-202ENST00000366814 IFT57Q9NWB7 429 aa13.92□□□□□ -0.18
H3F3A-202ENST00000366814 KDM2BQ8NHM5 1336 aa13.92□□□□□ -0.18
H3F3A-202ENST00000366814 DLG5Q8TDM6 1919 aa13.92□□□□□ -0.18
H3F3A-202ENST00000366814 TRIM37O94972 964 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
H3F3A-202ENST00000366814 CLUAP1Q96AJ1 413 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
H3F3A-202ENST00000366814 ERBB3P21860 1342 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 MAP3K19Q56UN5 1328 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 ALDH1L2Q3SY69 923 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 PANK1Q8TE04 598 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 BCL2L13Q9BXK5 485 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 COG6Q9Y2V7 657 aa13.91□□□□□ -0.18
H3F3A-202ENST00000366814 LAS1LQ9Y4W2 734 aaKnown RBP13.91□□□□□ -0.18
H3F3A-202ENST00000366814 EXOC5O00471 708 aa13.9□□□□□ -0.18
H3F3A-202ENST00000366814 IPO8O15397 1037 aaKnown RBP13.9□□□□□ -0.18
H3F3A-202ENST00000366814 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
H3F3A-202ENST00000366814 HOXC9P31274 260 aa13.89□□□□□ -0.19
H3F3A-202ENST00000366814 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
H3F3A-202ENST00000366814 DZIP1LQ8IYY4 767 aaKnown RBP13.89□□□□□ -0.19
H3F3A-202ENST00000366814 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
H3F3A-202ENST00000366814 WNK3Q9BYP7 1800 aa13.88□□□□□ -0.19
H3F3A-202ENST00000366814 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
H3F3A-202ENST00000366814 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
H3F3A-202ENST00000366814 APBA3O96018 575 aa13.87□□□□□ -0.19
H3F3A-202ENST00000366814 KAT6BQ8WYB5 2073 aa13.87□□□□□ -0.19
H3F3A-202ENST00000366814 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
H3F3A-202ENST00000366814 RTL1A6NKG5 1358 aa13.87□□□□□ -0.19
H3F3A-202ENST00000366814 IL2RBP14784 551 aa13.87□□□□□ -0.19
H3F3A-202ENST00000366814 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
H3F3A-202ENST00000366814 LRRC37A3O60309 1634 aa13.86□□□□□ -0.19
H3F3A-202ENST00000366814 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
H3F3A-202ENST00000366814 ATF7IPQ6VMQ6 1270 aa13.86□□□□□ -0.19
H3F3A-202ENST00000366814 MARCH10Q8NA82 808 aaPredicted RBP13.86□□□□□ -0.19
H3F3A-202ENST00000366814 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
H3F3A-202ENST00000366814 OVOS2A0A0G2JMS6 1433 aa13.85□□□□□ -0.19
H3F3A-202ENST00000366814 DISP2A7MBM2 1401 aa13.85□□□□□ -0.19
H3F3A-202ENST00000366814 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
H3F3A-202ENST00000366814 THUMPD2Q9BTF0 503 aaKnown RBP13.84□□□□□ -0.19
H3F3A-202ENST00000366814 DDX19BQ9UMR2 479 aa13.84□□□□□ -0.19
H3F3A-202ENST00000366814 KDRP35968 1356 aa13.84□□□□□ -0.19
H3F3A-202ENST00000366814 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
H3F3A-202ENST00000366814 GAS2L2Q8NHY3 880 aa13.84□□□□□ -0.19
H3F3A-202ENST00000366814 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
H3F3A-202ENST00000366814 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
H3F3A-202ENST00000366814 MBIPQ9NS73 344 aa13.84□□□□□ -0.19
H3F3A-202ENST00000366814 RGPD2P0DJD1 1756 aa13.84□□□□□ -0.19
H3F3A-202ENST00000366814 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
H3F3A-202ENST00000366814 RLBP1P12271 317 aa13.83□□□□□ -0.2
H3F3A-202ENST00000366814 ANP32AP39687 249 aaKnown RBP13.83□□□□□ -0.2
H3F3A-202ENST00000366814 EZH2Q15910 746 aaKnown RBP13.83□□□□□ -0.2
H3F3A-202ENST00000366814 NOB1Q9ULX3 412 aaKnown RBP13.83□□□□□ -0.2
H3F3A-202ENST00000366814 FAM208AQ9UK61 1670 aaKnown RBP13.83□□□□□ -0.2
H3F3A-202ENST00000366814 SBF2Q86WG5 1849 aa13.82□□□□□ -0.2
H3F3A-202ENST00000366814 TRIM27P14373 513 aa13.82□□□□□ -0.2
H3F3A-202ENST00000366814 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
H3F3A-202ENST00000366814 PDE4AP27815 886 aa13.82□□□□□ -0.2
H3F3A-202ENST00000366814 TWISTNBQ3B726 338 aaPredicted RBP13.82□□□□□ -0.2
H3F3A-202ENST00000366814 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
H3F3A-202ENST00000366814 CAMKK2Q96RR4 588 aa13.82□□□□□ -0.2
H3F3A-202ENST00000366814 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
H3F3A-202ENST00000366814 VAMP4O75379 141 aa13.81□□□□□ -0.2
H3F3A-202ENST00000366814 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
H3F3A-202ENST00000366814 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
H3F3A-202ENST00000366814 EYA1Q99502 592 aa13.81□□□□□ -0.2
H3F3A-202ENST00000366814 TNS2Q63HR2 1409 aa13.81□□□□□ -0.2
H3F3A-202ENST00000366814 DDX54Q8TDD1 881 aaKnown RBP13.8□□□□□ -0.2
H3F3A-202ENST00000366814 ARHGAP45Q92619 1136 aa13.8□□□□□ -0.2
H3F3A-202ENST00000366814 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
H3F3A-202ENST00000366814 TNNQ9UQP3 1299 aa13.8□□□□□ -0.2
H3F3A-202ENST00000366814 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
H3F3A-202ENST00000366814 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
H3F3A-202ENST00000366814 USHBP1Q8N6Y0 703 aa13.8□□□□□ -0.2
H3F3A-202ENST00000366814 BACH2Q9BYV9 841 aa13.8□□□□□ -0.2
H3F3A-202ENST00000366814 IGHDP01880 384 aa13.78□□□□□ -0.2
H3F3A-202ENST00000366814 RAPGEF4Q8WZA2 1011 aa13.78□□□□□ -0.2
H3F3A-202ENST00000366814 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
H3F3A-202ENST00000366814 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
H3F3A-202ENST00000366814 CHL1O00533 1208 aa13.78□□□□□ -0.2
H3F3A-202ENST00000366814 MTHFSDQ2M296 383 aaKnown RBP13.78□□□□□ -0.2
H3F3A-202ENST00000366814 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
H3F3A-202ENST00000366814 MCM10Q7L590 875 aa13.78□□□□□ -0.2
H3F3A-202ENST00000366814 PTF1AQ7RTS3 328 aa13.78□□□□□ -0.2
H3F3A-202ENST00000366814 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
H3F3A-202ENST00000366814 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
H3F3A-202ENST00000366814 TATP17735 454 aaPredicted RBP13.77□□□□□ -0.21
H3F3A-202ENST00000366814 RGS3P49796 1198 aa13.77□□□□□ -0.21
H3F3A-202ENST00000366814 TMEM57Q8N5G2 664 aa13.77□□□□□ -0.21
H3F3A-202ENST00000366814 BCL9O00512 1426 aa13.77□□□□□ -0.21
H3F3A-202ENST00000366814 ELL2O00472 640 aaPredicted RBP13.76□□□□□ -0.21
H3F3A-202ENST00000366814 KCNQ2O43526 872 aa13.76□□□□□ -0.21
H3F3A-202ENST00000366814 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
H3F3A-202ENST00000366814 API5Q9BZZ5 524 aaKnown RBP13.76□□□□□ -0.21
H3F3A-202ENST00000366814 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
H3F3A-202ENST00000366814 PLSCR1O15162 318 aa13.76□□□□□ -0.21
H3F3A-202ENST00000366814 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms