RNA–Protein interactions for RNA: ENST00000363468.1

RNU1-49P-201, Transcript of RNA, U1 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU1-49P, Length 159 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-49P-201ENST00000363468 CFAP44Q96MT7 982 aa8.15□□□□□ -1.1
RNU1-49P-201ENST00000363468 SPINK5Q9NQ38 1064 aaPredicted RBP8.15□□□□□ -1.1
RNU1-49P-201ENST00000363468 IFT57Q9NWB7 429 aa8.15□□□□□ -1.1
RNU1-49P-201ENST00000363468 CHL1O00533 1208 aa8.14□□□□□ -1.11
RNU1-49P-201ENST00000363468 ZNF853P0CG23 659 aa8.14□□□□□ -1.11
RNU1-49P-201ENST00000363468 SLFN5Q08AF3 891 aa8.14□□□□□ -1.11
RNU1-49P-201ENST00000363468 FAM196AQ6ZSG2 479 aa8.14□□□□□ -1.11
RNU1-49P-201ENST00000363468 BABAM1Q9NWV8 329 aa8.14□□□□□ -1.11
RNU1-49P-201ENST00000363468 KDM3BQ7LBC6 1761 aa8.14□□□□□ -1.11
RNU1-49P-201ENST00000363468 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
RNU1-49P-201ENST00000363468 BTBD11A6QL63 1104 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 E9PSI1 815 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 PRIM1P49642 420 aaKnown RBP8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 TRMT2AQ8IZ69 625 aaKnown RBP8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 PIGBQ92521 554 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 ACSBG1Q96GR2 724 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 MYH16Q9H6N6 1097 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 MBIPQ9NS73 344 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 TMOD3Q9NYL9 352 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 LAS1LQ9Y4W2 734 aaKnown RBP8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 BTAF1O14981 1849 aa8.13□□□□□ -1.11
RNU1-49P-201ENST00000363468 PAPPAQ13219 1627 aa8.12□□□□□ -1.11
RNU1-49P-201ENST00000363468 KCNQ2O43526 872 aa8.12□□□□□ -1.11
RNU1-49P-201ENST00000363468 SYTL4Q96C24 671 aaPredicted RBP8.12□□□□□ -1.11
RNU1-49P-201ENST00000363468 TSPYL4Q9UJ04 414 aa8.12□□□□□ -1.11
RNU1-49P-201ENST00000363468 UBR2Q8IWV8 1755 aa8.12□□□□□ -1.11
RNU1-49P-201ENST00000363468 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 KCNQ3O43525 872 aa8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 SLC39A6Q13433 755 aa8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 DUSP27Q5VZP5 1158 aa8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 ZNF790Q6PG37 636 aa8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 PTF1AQ7RTS3 328 aa8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 TSR2Q969E8 191 aaKnown RBP8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 BCL11BQ9C0K0 894 aaPredicted RBP8.11□□□□□ -1.11
RNU1-49P-201ENST00000363468 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
RNU1-49P-201ENST00000363468 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
RNU1-49P-201ENST00000363468 TRIM37O94972 964 aa8.09□□□□□ -1.11
RNU1-49P-201ENST00000363468 EIF4A1P60842 406 aaKnown RBP8.09□□□□□ -1.11
RNU1-49P-201ENST00000363468 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
RNU1-49P-201ENST00000363468 TTC5Q8N0Z6 440 aa8.09□□□□□ -1.11
RNU1-49P-201ENST00000363468 SMARCC1Q92922 1105 aaPredicted RBP8.09□□□□□ -1.11
RNU1-49P-201ENST00000363468 LY75O60449 1722 aa8.09□□□□□ -1.11
RNU1-49P-201ENST00000363468 TNS1Q9HBL0 1735 aaKnown RBP8.09□□□□□ -1.11
RNU1-49P-201ENST00000363468 HEG1Q9ULI3 1381 aa8.09□□□□□ -1.12
RNU1-49P-201ENST00000363468 KCPQ6ZWJ8 1503 aa8.08□□□□□ -1.12
RNU1-49P-201ENST00000363468 C8orf58Q8NAV2 365 aa8.08□□□□□ -1.12
RNU1-49P-201ENST00000363468 ZNF496Q96IT1 587 aaPredicted RBP8.08□□□□□ -1.12
RNU1-49P-201ENST00000363468 FMNL2Q96PY5 1086 aa8.08□□□□□ -1.12
RNU1-49P-201ENST00000363468 PALLDQ8WX93 1383 aa8.08□□□□□ -1.12
RNU1-49P-201ENST00000363468 ZNF831Q5JPB2 1677 aa8.08□□□□□ -1.12
RNU1-49P-201ENST00000363468 EP400Q96L91 3159 aa8.08□□□□□ -1.12
RNU1-49P-201ENST00000363468 ELL2O00472 640 aaPredicted RBP8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 PTCD1O75127 700 aaKnown RBP8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 KRT24Q2M2I5 525 aa8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 VSIG10Q8N0Z9 540 aa8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 TSPYL6Q8N831 410 aa8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 RBM42Q9BTD8 480 aaKnown RBP8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 CACNA1FO60840 1977 aa8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 C5P01031 1676 aa8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 LAMB4A4D0S4 1761 aa8.07□□□□□ -1.12
RNU1-49P-201ENST00000363468 SOS1Q07889 1333 aaPredicted RBP8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 VAMP4O75379 141 aa8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 HOXB7P09629 217 aa8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 SNRPA1P09661 255 aaKnown RBP8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 CT47B1P0C2W7 299 aaPredicted RBP8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 TWISTNBQ3B726 338 aaPredicted RBP8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 SLC4A9Q96Q91 983 aa8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 RGPD3A6NKT7 1758 aaPredicted RBP8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 RGPD4Q7Z3J3 1758 aa8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 CICQ96RK0 1608 aaPredicted RBP8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 TJP1Q07157 1748 aa8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
RNU1-49P-201ENST00000363468 LOC102724428A0A0B4J2F2 783 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 PRAMEF22A3QJZ6 481 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 PLSCR1O15162 318 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 APBA3O96018 575 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 ATP6V1AP38606 617 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 SIK1P57059 783 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 ZNF428Q96B54 188 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 TEX13AQ9BXU3 409 aaPredicted RBP8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 USP16Q9Y5T5 823 aa8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 COL5A3P25940 1745 aaPredicted RBP8.05□□□□□ -1.12
RNU1-49P-201ENST00000363468 CCDC125Q86Z20 511 aa8.04□□□□□ -1.12
RNU1-49P-201ENST00000363468 DNAJC10Q8IXB1 793 aa8.04□□□□□ -1.12
RNU1-49P-201ENST00000363468 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
RNU1-49P-201ENST00000363468 CENPBP07199 599 aaPredicted RBP8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 EIF2S2P20042 333 aaKnown RBP8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 SF3B2Q13435 895 aaKnown RBP8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 ITPK1Q13572 414 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 ALDH1L2Q3SY69 923 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 SLC27A3Q5K4L6 730 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 HDGFL1Q5TGJ6 251 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 CCDC30Q5VVM6 783 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 ILDR2Q71H61 639 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 PROM2Q8N271 834 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 CHMP4AQ9BY43 222 aa8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 CCNL1Q9UK58 526 aaPredicted RBP8.03□□□□□ -1.12
RNU1-49P-201ENST00000363468 RREB1Q92766 1687 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms