RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 TFCP2L1Q9NZI6 479 aa22.55■■□□□ 1.2
CKLF-204ENST00000362093 IL17REQ8NFR9 667 aa22.54■■□□□ 1.2
CKLF-204ENST00000362093 LRP5O75197 1615 aa22.53■■□□□ 1.2
CKLF-204ENST00000362093 CASZ1Q86V15 1759 aa22.53■■□□□ 1.2
CKLF-204ENST00000362093 MAP3K5Q99683 1374 aa22.53■■□□□ 1.2
CKLF-204ENST00000362093 ATP6V1AP38606 617 aa22.53■■□□□ 1.2
CKLF-204ENST00000362093 SLC4A9Q96Q91 983 aa22.53■■□□□ 1.2
CKLF-204ENST00000362093 PLEKHF1Q96S99 279 aa22.53■■□□□ 1.2
CKLF-204ENST00000362093 SPON1Q9HCB6 807 aa22.53■■□□□ 1.2
CKLF-204ENST00000362093 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
CKLF-204ENST00000362093 ITPK1Q13572 414 aa22.52■■□□□ 1.2
CKLF-204ENST00000362093 PNPLA7Q6ZV29 1317 aa22.52■■□□□ 1.2
CKLF-204ENST00000362093 LINC00116Q8NCU8 138 aa22.51■■□□□ 1.19
CKLF-204ENST00000362093 RBM42Q9BTD8 480 aaKnown RBP22.51■■□□□ 1.19
CKLF-204ENST00000362093 MRC1P22897 1456 aa22.5■■□□□ 1.19
CKLF-204ENST00000362093 ZBTB7AO95365 584 aa22.5■■□□□ 1.19
CKLF-204ENST00000362093 PNNQ9H307 717 aaKnown RBP22.49■■□□□ 1.19
CKLF-204ENST00000362093 TAF1LQ8IZX4 1826 aa22.49■■□□□ 1.19
CKLF-204ENST00000362093 C5P01031 1676 aa22.49■■□□□ 1.19
CKLF-204ENST00000362093 PTCD1O75127 700 aaKnown RBP22.48■■□□□ 1.19
CKLF-204ENST00000362093 SLC16A10Q8TF71 515 aa22.48■■□□□ 1.19
CKLF-204ENST00000362093 MTFR1LQ9H019 292 aa22.48■■□□□ 1.19
CKLF-204ENST00000362093 ATF5Q9Y2D1 282 aaPredicted RBP22.48■■□□□ 1.19
CKLF-204ENST00000362093 CEMIPQ8WUJ3 1361 aa22.48■■□□□ 1.19
CKLF-204ENST00000362093 SLC39A6Q13433 755 aa22.47■■□□□ 1.19
CKLF-204ENST00000362093 COL23A1Q86Y22 540 aaPredicted RBP22.47■■□□□ 1.19
CKLF-204ENST00000362093 QSER1Q2KHR3 1735 aa22.47■■□□□ 1.19
CKLF-204ENST00000362093 HTATSF1O43719 755 aaKnown RBP22.46■■□□□ 1.19
CKLF-204ENST00000362093 NEFMP07197 916 aa22.46■■□□□ 1.19
CKLF-204ENST00000362093 PTGER2P43116 358 aa22.46■■□□□ 1.19
CKLF-204ENST00000362093 AK7Q96M32 723 aa22.46■■□□□ 1.19
CKLF-204ENST00000362093 C4BP0C0L5 1744 aa22.45■■□□□ 1.19
CKLF-204ENST00000362093 VIRMAQ69YN4 1812 aaKnown RBP22.45■■□□□ 1.19
CKLF-204ENST00000362093 TEFQ10587 303 aa22.45■■□□□ 1.18
CKLF-204ENST00000362093 AMIGO3Q86WK7 504 aa22.45■■□□□ 1.18
CKLF-204ENST00000362093 ZNF831Q5JPB2 1677 aa22.45■■□□□ 1.18
CKLF-204ENST00000362093 FLAD1Q8NFF5 587 aa22.44■■□□□ 1.18
CKLF-204ENST00000362093 RTF1Q92541 710 aaKnown RBP22.44■■□□□ 1.18
CKLF-204ENST00000362093 TUBGCP6Q96RT7 1819 aa22.44■■□□□ 1.18
CKLF-204ENST00000362093 SGIP1Q9BQI5 828 aa22.44■■□□□ 1.18
CKLF-204ENST00000362093 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
CKLF-204ENST00000362093 NFE2L2Q16236 605 aa22.42■■□□□ 1.18
CKLF-204ENST00000362093 MCM10Q7L590 875 aa22.42■■□□□ 1.18
CKLF-204ENST00000362093 CNTNAP4Q9C0A0 1308 aa22.41■■□□□ 1.18
CKLF-204ENST00000362093 DCTN1Q14203 1278 aa22.41■■□□□ 1.18
CKLF-204ENST00000362093 SMIM5Q71RC9 77 aa22.41■■□□□ 1.18
CKLF-204ENST00000362093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.4■■□□□ 1.18
CKLF-204ENST00000362093 SSFA2P28290 1259 aa22.4■■□□□ 1.18
CKLF-204ENST00000362093 ZNF790Q6PG37 636 aa22.4■■□□□ 1.18
CKLF-204ENST00000362093 VSIG10Q8N0Z9 540 aa22.4■■□□□ 1.18
CKLF-204ENST00000362093 ADAMTS8Q9UP79 889 aa22.4■■□□□ 1.18
CKLF-204ENST00000362093 MAPK8IP3Q9UPT6 1336 aa22.39■■□□□ 1.18
CKLF-204ENST00000362093 GNPATO15228 680 aa22.39■■□□□ 1.17
CKLF-204ENST00000362093 MSH5O43196 834 aa22.39■■□□□ 1.17
CKLF-204ENST00000362093 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.17
CKLF-204ENST00000362093 KCPQ6ZWJ8 1503 aa22.38■■□□□ 1.17
CKLF-204ENST00000362093 BTBD11A6QL63 1104 aa22.38■■□□□ 1.17
CKLF-204ENST00000362093 RPS6KA4O75676 772 aa22.38■■□□□ 1.17
CKLF-204ENST00000362093 DNAJC10Q8IXB1 793 aa22.38■■□□□ 1.17
CKLF-204ENST00000362093 TTC5Q8N0Z6 440 aa22.38■■□□□ 1.17
CKLF-204ENST00000362093 PPP1R1BQ9UD71 204 aaPredicted RBP22.38■■□□□ 1.17
CKLF-204ENST00000362093 UBR3Q6ZT12 1888 aa22.37■■□□□ 1.17
CKLF-204ENST00000362093 PHF14O94880 888 aa22.37■■□□□ 1.17
CKLF-204ENST00000362093 CRKLP46109 303 aaKnown RBP22.37■■□□□ 1.17
CKLF-204ENST00000362093 RTCBQ9Y3I0 505 aaKnown RBP22.37■■□□□ 1.17
CKLF-204ENST00000362093 SIPA1L3O60292 1781 aaPredicted RBP22.37■■□□□ 1.17
CKLF-204ENST00000362093 ANP32CO43423 234 aa22.36■■□□□ 1.17
CKLF-204ENST00000362093 KCNQ3O43525 872 aa22.36■■□□□ 1.17
CKLF-204ENST00000362093 CCDC184Q52MB2 194 aa22.36■■□□□ 1.17
CKLF-204ENST00000362093 INTS5Q6P9B9 1019 aaKnown RBP22.36■■□□□ 1.17
CKLF-204ENST00000362093 ZNF496Q96IT1 587 aaPredicted RBP22.36■■□□□ 1.17
CKLF-204ENST00000362093 COL5A3P25940 1745 aaPredicted RBP22.35■■□□□ 1.17
CKLF-204ENST00000362093 CYP19A1P11511 503 aaPredicted RBP22.35■■□□□ 1.17
CKLF-204ENST00000362093 TMPOP42166 694 aaKnown RBP22.35■■□□□ 1.17
CKLF-204ENST00000362093 TAF7Q15545 349 aaPredicted RBP22.35■■□□□ 1.17
CKLF-204ENST00000362093 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
CKLF-204ENST00000362093 RUNDC1Q96C34 613 aa22.35■■□□□ 1.17
CKLF-204ENST00000362093 CICQ96RK0 1608 aaPredicted RBP22.35■■□□□ 1.17
CKLF-204ENST00000362093 RIPK4P57078 832 aa22.34■■□□□ 1.17
CKLF-204ENST00000362093 TRAPPC3LQ5T215 181 aa22.34■■□□□ 1.17
CKLF-204ENST00000362093 TJP1Q07157 1748 aa22.34■■□□□ 1.17
CKLF-204ENST00000362093 COL24A1Q17RW2 1714 aa22.34■■□□□ 1.17
CKLF-204ENST00000362093 MYH14Q7Z406 1995 aaKnown RBP22.33■■□□□ 1.17
CKLF-204ENST00000362093 ADRA2BP18089 450 aa22.33■■□□□ 1.17
CKLF-204ENST00000362093 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.17
CKLF-204ENST00000362093 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.17
CKLF-204ENST00000362093 ARXQ96QS3 562 aa22.33■■□□□ 1.17
CKLF-204ENST00000362093 HEG1Q9ULI3 1381 aa22.33■■□□□ 1.17
CKLF-204ENST00000362093 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
CKLF-204ENST00000362093 UBR2Q8IWV8 1755 aa22.33■■□□□ 1.16
CKLF-204ENST00000362093 POLD1P28340 1107 aa22.32■■□□□ 1.16
CKLF-204ENST00000362093 MSL1Q68DK7 614 aa22.31■■□□□ 1.16
CKLF-204ENST00000362093 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
CKLF-204ENST00000362093 CCDC87Q9NVE4 849 aa22.31■■□□□ 1.16
CKLF-204ENST00000362093 TEX13AQ9BXU3 409 aaPredicted RBP22.3■■□□□ 1.16
CKLF-204ENST00000362093 PNISRQ8TF01 805 aaKnown RBP22.29■■□□□ 1.16
CKLF-204ENST00000362093 MIS18AQ9NYP9 233 aa22.29■■□□□ 1.16
CKLF-204ENST00000362093 STARD3NLO95772 234 aa22.28■■□□□ 1.16
CKLF-204ENST00000362093 FHDC1Q9C0D6 1143 aaPredicted RBP22.28■■□□□ 1.16
CKLF-204ENST00000362093 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 357.4 ms