RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 EN1Q05925 392 aaPredicted RBP16.5■□□□□ 0.23
CNTF-201ENST00000361987 NHSQ6T4R5 1651 aa16.5■□□□□ 0.23
CNTF-201ENST00000361987 ITGB4P16144 1822 aa16.49■□□□□ 0.23
CNTF-201ENST00000361987 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
CNTF-201ENST00000361987 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
CNTF-201ENST00000361987 ATG3Q9NT62 314 aa16.49■□□□□ 0.23
CNTF-201ENST00000361987 MIS18AQ9NYP9 233 aa16.49■□□□□ 0.23
CNTF-201ENST00000361987 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
CNTF-201ENST00000361987 PLSCR1O15162 318 aa16.48■□□□□ 0.23
CNTF-201ENST00000361987 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
CNTF-201ENST00000361987 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
CNTF-201ENST00000361987 LAS1LQ9Y4W2 734 aaKnown RBP16.48■□□□□ 0.23
CNTF-201ENST00000361987 VIRMAQ69YN4 1812 aaKnown RBP16.47■□□□□ 0.23
CNTF-201ENST00000361987 SOCS7O14512 581 aa16.47■□□□□ 0.23
CNTF-201ENST00000361987 BTAF1O14981 1849 aa16.47■□□□□ 0.23
CNTF-201ENST00000361987 ADAMTS7Q9UKP4 1686 aa16.47■□□□□ 0.23
CNTF-201ENST00000361987 PTCD1O75127 700 aaKnown RBP16.46■□□□□ 0.23
CNTF-201ENST00000361987 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
CNTF-201ENST00000361987 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
CNTF-201ENST00000361987 PALLDQ8WX93 1383 aa16.46■□□□□ 0.23
CNTF-201ENST00000361987 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.22
CNTF-201ENST00000361987 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.22
CNTF-201ENST00000361987 ZNF790Q6PG37 636 aa16.46■□□□□ 0.22
CNTF-201ENST00000361987 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.22
CNTF-201ENST00000361987 MRC1P22897 1456 aa16.45■□□□□ 0.22
CNTF-201ENST00000361987 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
CNTF-201ENST00000361987 CAMKK2Q96RR4 588 aa16.45■□□□□ 0.22
CNTF-201ENST00000361987 KCNQ3O43525 872 aa16.44■□□□□ 0.22
CNTF-201ENST00000361987 KCNQ4P56696 695 aa16.44■□□□□ 0.22
CNTF-201ENST00000361987 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
CNTF-201ENST00000361987 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
CNTF-201ENST00000361987 PROM2Q8N271 834 aa16.44■□□□□ 0.22
CNTF-201ENST00000361987 TSPYL4Q9UJ04 414 aa16.44■□□□□ 0.22
CNTF-201ENST00000361987 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
CNTF-201ENST00000361987 LOC102724428A0A0B4J2F2 783 aa16.43■□□□□ 0.22
CNTF-201ENST00000361987 SIK1P57059 783 aa16.43■□□□□ 0.22
CNTF-201ENST00000361987 ATP6V1AP38606 617 aa16.42■□□□□ 0.22
CNTF-201ENST00000361987 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
CNTF-201ENST00000361987 CCNL1Q9UK58 526 aaPredicted RBP16.42■□□□□ 0.22
CNTF-201ENST00000361987 CHL1O00533 1208 aa16.42■□□□□ 0.22
CNTF-201ENST00000361987 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
CNTF-201ENST00000361987 GNAI1P63096 354 aa16.41■□□□□ 0.22
CNTF-201ENST00000361987 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
CNTF-201ENST00000361987 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
CNTF-201ENST00000361987 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
CNTF-201ENST00000361987 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
CNTF-201ENST00000361987 BABAM1Q9NWV8 329 aa16.4■□□□□ 0.22
CNTF-201ENST00000361987 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.22
CNTF-201ENST00000361987 SLC4A9Q96Q91 983 aa16.39■□□□□ 0.22
CNTF-201ENST00000361987 MBIPQ9NS73 344 aa16.39■□□□□ 0.22
CNTF-201ENST00000361987 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
CNTF-201ENST00000361987 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
CNTF-201ENST00000361987 IL16Q14005 1332 aa16.38■□□□□ 0.21
CNTF-201ENST00000361987 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
CNTF-201ENST00000361987 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
CNTF-201ENST00000361987 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
CNTF-201ENST00000361987 ITPK1Q13572 414 aa16.37■□□□□ 0.21
CNTF-201ENST00000361987 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
CNTF-201ENST00000361987 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
CNTF-201ENST00000361987 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
CNTF-201ENST00000361987 HEG1Q9ULI3 1381 aa16.36■□□□□ 0.21
CNTF-201ENST00000361987 SNRPA1P09661 255 aaKnown RBP16.35■□□□□ 0.21
CNTF-201ENST00000361987 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
CNTF-201ENST00000361987 LY75O60449 1722 aa16.35■□□□□ 0.21
CNTF-201ENST00000361987 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
CNTF-201ENST00000361987 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
CNTF-201ENST00000361987 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
CNTF-201ENST00000361987 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
CNTF-201ENST00000361987 KRT24Q2M2I5 525 aa16.34■□□□□ 0.21
CNTF-201ENST00000361987 LINC00116Q8NCU8 138 aa16.34■□□□□ 0.21
CNTF-201ENST00000361987 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
CNTF-201ENST00000361987 PAPPAQ13219 1627 aa16.34■□□□□ 0.21
CNTF-201ENST00000361987 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.21
CNTF-201ENST00000361987 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.21
CNTF-201ENST00000361987 NBPF14Q5TI25 921 aa16.33■□□□□ 0.21
CNTF-201ENST00000361987 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.21
CNTF-201ENST00000361987 RGPD3A6NKT7 1758 aaPredicted RBP16.33■□□□□ 0.2
CNTF-201ENST00000361987 RGPD4Q7Z3J3 1758 aa16.33■□□□□ 0.2
CNTF-201ENST00000361987 ELL2O00472 640 aaPredicted RBP16.33■□□□□ 0.2
CNTF-201ENST00000361987 STARD3NLO95772 234 aa16.33■□□□□ 0.2
CNTF-201ENST00000361987 USP16Q9Y5T5 823 aa16.33■□□□□ 0.2
CNTF-201ENST00000361987 E9PSI1 815 aa16.32■□□□□ 0.2
CNTF-201ENST00000361987 FANCIQ9NVI1 1328 aa16.32■□□□□ 0.2
CNTF-201ENST00000361987 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 CYP19A1P11511 503 aaPredicted RBP16.31■□□□□ 0.2
CNTF-201ENST00000361987 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
CNTF-201ENST00000361987 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
CNTF-201ENST00000361987 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 AK7Q96M32 723 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 TFCP2L1Q9NZI6 479 aa16.31■□□□□ 0.2
CNTF-201ENST00000361987 ANO8Q9HCE9 1232 aaPredicted RBP16.3■□□□□ 0.2
CNTF-201ENST00000361987 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
CNTF-201ENST00000361987 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
CNTF-201ENST00000361987 GNPATO15228 680 aa16.29■□□□□ 0.2
CNTF-201ENST00000361987 A1BGP04217 495 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms