RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 KRT28Q7Z3Y7 464 aa28.66■■■□□ 2.18
R3HDM4-201ENST00000361574 F6X3S4 739 aa28.66■■■□□ 2.18
R3HDM4-201ENST00000361574 CDC45O75419 566 aa28.65■■■□□ 2.18
R3HDM4-201ENST00000361574 GNAI3P08754 354 aa28.65■■■□□ 2.18
R3HDM4-201ENST00000361574 TTC22Q5TAA0 569 aa28.65■■■□□ 2.18
R3HDM4-201ENST00000361574 TBC1D9Q6ZT07 1266 aa28.65■■■□□ 2.18
R3HDM4-201ENST00000361574 ABCC6O95255 1503 aa28.65■■■□□ 2.18
R3HDM4-201ENST00000361574 GNAI2P04899 355 aa28.64■■■□□ 2.18
R3HDM4-201ENST00000361574 SNX21Q969T3 373 aa28.64■■■□□ 2.18
R3HDM4-201ENST00000361574 EIF4A1P60842 406 aaKnown RBP28.64■■■□□ 2.17
R3HDM4-201ENST00000361574 SIPA1L3O60292 1781 aaPredicted RBP28.63■■■□□ 2.17
R3HDM4-201ENST00000361574 GSPT1P15170 499 aaKnown RBP28.63■■■□□ 2.17
R3HDM4-201ENST00000361574 STRCP1A6NGW2 1772 aa28.63■■■□□ 2.17
R3HDM4-201ENST00000361574 SLC4A10Q6U841 1118 aa28.62■■■□□ 2.17
R3HDM4-201ENST00000361574 PLEKHG2Q9H7P9 1386 aa28.62■■■□□ 2.17
R3HDM4-201ENST00000361574 FKBP5Q13451 457 aaPredicted RBP28.62■■■□□ 2.17
R3HDM4-201ENST00000361574 HDGFL1Q5TGJ6 251 aa28.6■■■□□ 2.17
R3HDM4-201ENST00000361574 ZNF530Q6P9A1 599 aaPredicted RBP28.6■■■□□ 2.17
R3HDM4-201ENST00000361574 ANKRD24Q8TF21 1146 aa28.6■■■□□ 2.17
R3HDM4-201ENST00000361574 LRRC59Q96AG4 307 aaKnown RBP28.6■■■□□ 2.17
R3HDM4-201ENST00000361574 OSBPL3Q9H4L5 887 aa28.6■■■□□ 2.17
R3HDM4-201ENST00000361574 LGR6Q9HBX8 967 aa28.6■■■□□ 2.17
R3HDM4-201ENST00000361574 RGPD5Q99666 1765 aa28.59■■■□□ 2.17
R3HDM4-201ENST00000361574 PXDNQ92626 1479 aa28.58■■■□□ 2.17
R3HDM4-201ENST00000361574 CRYBG1Q9Y4K1 1723 aa28.58■■■□□ 2.17
R3HDM4-201ENST00000361574 HEG1Q9ULI3 1381 aa28.57■■■□□ 2.16
R3HDM4-201ENST00000361574 ATP8B2P98198 1209 aa28.57■■■□□ 2.16
R3HDM4-201ENST00000361574 XPCQ01831 940 aaPredicted RBP28.57■■■□□ 2.16
R3HDM4-201ENST00000361574 COL18A1P39060 1754 aa28.56■■■□□ 2.16
R3HDM4-201ENST00000361574 RNMTO43148 476 aaKnown RBP28.56■■■□□ 2.16
R3HDM4-201ENST00000361574 KIF2CQ99661 725 aa28.55■■■□□ 2.16
R3HDM4-201ENST00000361574 TUBGCP6Q96RT7 1819 aa28.55■■■□□ 2.16
R3HDM4-201ENST00000361574 TMEM94Q12767 1356 aa28.55■■■□□ 2.16
R3HDM4-201ENST00000361574 FRAT2O75474 233 aaPredicted RBP28.55■■■□□ 2.16
R3HDM4-201ENST00000361574 TEFQ10587 303 aa28.55■■■□□ 2.16
R3HDM4-201ENST00000361574 C16orf71Q8IYS4 520 aaPredicted RBP28.55■■■□□ 2.16
R3HDM4-201ENST00000361574 HSCBQ8IWL3 235 aa28.53■■■□□ 2.16
R3HDM4-201ENST00000361574 AXIN2Q9Y2T1 843 aa28.53■■■□□ 2.16
R3HDM4-201ENST00000361574 ERBB3P21860 1342 aa28.53■■■□□ 2.16
R3HDM4-201ENST00000361574 C1orf141Q5JVX7 400 aa28.53■■■□□ 2.16
R3HDM4-201ENST00000361574 USP44Q9H0E7 712 aa28.53■■■□□ 2.16
R3HDM4-201ENST00000361574 ATF3P18847 181 aa28.52■■■□□ 2.16
R3HDM4-201ENST00000361574 SLKQ9H2G2 1235 aaPredicted RBP28.52■■■□□ 2.16
R3HDM4-201ENST00000361574 SALL3Q9BXA9 1300 aa28.52■■■□□ 2.16
R3HDM4-201ENST00000361574 ZBTB7CA1YPR0 619 aa28.51■■■□□ 2.15
R3HDM4-201ENST00000361574 BTBD11A6QL63 1104 aa28.51■■■□□ 2.15
R3HDM4-201ENST00000361574 OTUD7AQ8TE49 926 aaPredicted RBP28.51■■■□□ 2.15
R3HDM4-201ENST00000361574 NECTIN2Q92692 538 aa28.5■■■□□ 2.15
R3HDM4-201ENST00000361574 IBTKQ9P2D0 1353 aaPredicted RBP28.5■■■□□ 2.15
R3HDM4-201ENST00000361574 SMARCA5O60264 1052 aaPredicted RBP28.49■■■□□ 2.15
R3HDM4-201ENST00000361574 SCN11AQ9UI33 1791 aa28.48■■■□□ 2.15
R3HDM4-201ENST00000361574 PHAXQ9H814 394 aaKnown RBP28.48■■■□□ 2.15
R3HDM4-201ENST00000361574 SDSP20132 328 aa28.48■■■□□ 2.15
R3HDM4-201ENST00000361574 LMOD2Q6P5Q4 547 aa28.48■■■□□ 2.15
R3HDM4-201ENST00000361574 MPRIPQ6WCQ1 1025 aa28.48■■■□□ 2.15
R3HDM4-201ENST00000361574 CHMP5Q9NZZ3 219 aa28.48■■■□□ 2.15
R3HDM4-201ENST00000361574 DDIT3P35638 169 aa28.47■■■□□ 2.15
R3HDM4-201ENST00000361574 KCNQ3O43525 872 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 PDE1AP54750 535 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 CADPS2Q86UW7 1296 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 SSH3Q8TE77 659 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 SRCIN1Q9C0H9 1055 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 TNS3Q68CZ2 1445 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 NPHP3Q7Z494 1330 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 UBTFL1P0CB47 393 aaPredicted RBP28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 GSE1Q14687 1217 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 LRRCC1Q9C099 1032 aa28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 LRRFIP2Q9Y608 721 aaKnown RBP28.46■■■□□ 2.15
R3HDM4-201ENST00000361574 PNMA6EA0A0J9YXQ4 647 aa28.45■■■□□ 2.14
R3HDM4-201ENST00000361574 CHPF2Q9P2E5 772 aa28.45■■■□□ 2.14
R3HDM4-201ENST00000361574 CASC1Q6TDU7 716 aa28.44■■■□□ 2.14
R3HDM4-201ENST00000361574 DBF4Q9UBU7 674 aaPredicted RBP28.44■■■□□ 2.14
R3HDM4-201ENST00000361574 POLA2Q14181 598 aa28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 BEND3Q5T5X7 828 aa28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 DNAAF4Q8WXU2 420 aa28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 STAP2Q9UGK3 403 aa28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 AOX1Q06278 1338 aa28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 GIGYF1O75420 1035 aaPredicted RBP28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 USP26Q9BXU7 913 aa28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 XIRP1Q702N8 1843 aaKnown RBP28.43■■■□□ 2.14
R3HDM4-201ENST00000361574 CIZ1Q9ULV3 898 aaPredicted RBP28.42■■■□□ 2.14
R3HDM4-201ENST00000361574 ADCY9O60503 1353 aa28.41■■■□□ 2.14
R3HDM4-201ENST00000361574 EIF2S2P20042 333 aaKnown RBP28.41■■■□□ 2.14
R3HDM4-201ENST00000361574 PKD1L3Q7Z443 1732 aa28.41■■■□□ 2.14
R3HDM4-201ENST00000361574 CPDO75976 1380 aa28.41■■■□□ 2.14
R3HDM4-201ENST00000361574 EXOC6BQ9Y2D4 811 aa28.41■■■□□ 2.14
R3HDM4-201ENST00000361574 KDM4FA0A1W2PPD8 638 aa28.4■■■□□ 2.14
R3HDM4-201ENST00000361574 RAB11FIP3O75154 756 aa28.4■■■□□ 2.14
R3HDM4-201ENST00000361574 MRC1P22897 1456 aa28.4■■■□□ 2.14
R3HDM4-201ENST00000361574 APBB1O00213 710 aa28.38■■■□□ 2.13
R3HDM4-201ENST00000361574 ALDH1L1O75891 902 aa28.38■■■□□ 2.13
R3HDM4-201ENST00000361574 RABEP1Q15276 862 aa28.38■■■□□ 2.13
R3HDM4-201ENST00000361574 PI4KAP2A4QPH2 592 aa28.37■■■□□ 2.13
R3HDM4-201ENST00000361574 ZC3H6P61129 1189 aaKnown RBP28.37■■■□□ 2.13
R3HDM4-201ENST00000361574 PI4KAP1Q8N8J0 262 aa28.37■■■□□ 2.13
R3HDM4-201ENST00000361574 SPATA31A3Q5VYP0 1347 aa28.37■■■□□ 2.13
R3HDM4-201ENST00000361574 KDM6AO15550 1401 aaPredicted RBP28.37■■■□□ 2.13
R3HDM4-201ENST00000361574 REC8O95072 547 aa28.36■■■□□ 2.13
R3HDM4-201ENST00000361574 MX1P20591 662 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms