RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 EFCAB6Q5THR3 1501 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 TEX35Q5T0J7 233 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 MYOM2P54296 1465 aa11.9□□□□□ -0.51
SIN3A-201ENST00000360439 H0YHG0 523 aa11.9□□□□□ -0.51
SIN3A-201ENST00000360439 TRAK2O60296 914 aa11.9□□□□□ -0.51
SIN3A-201ENST00000360439 SARNPP82979 210 aaKnown RBP11.9□□□□□ -0.51
SIN3A-201ENST00000360439 ANKRD36BQ8N2N9 1353 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 AMOTQ4VCS5 1084 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 DDB1Q16531 1140 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 TBC1D32Q96NH3 1257 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 MCM10Q7L590 875 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 ACSBG1Q96GR2 724 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 PANK2Q9BZ23 570 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 EXOSC9Q06265 439 aaKnown RBP11.89□□□□□ -0.51
SIN3A-201ENST00000360439 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 KAT6BQ8WYB5 2073 aa11.89□□□□□ -0.51
SIN3A-201ENST00000360439 REC8O95072 547 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 MYCBPQ99417 103 aaPredicted RBP11.88□□□□□ -0.51
SIN3A-201ENST00000360439 TMEM51Q9NW97 253 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 DCTN1Q14203 1278 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 INTS3Q68E01 1043 aaKnown RBP11.88□□□□□ -0.51
SIN3A-201ENST00000360439 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
SIN3A-201ENST00000360439 GRPEL1Q9HAV7 217 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 ERVK-7P63135 1459 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 ABCA9Q8IUA7 1624 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 MCM4P33991 863 aa11.88□□□□□ -0.51
SIN3A-201ENST00000360439 THUMPD2Q9BTF0 503 aaKnown RBP11.88□□□□□ -0.51
SIN3A-201ENST00000360439 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
SIN3A-201ENST00000360439 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
SIN3A-201ENST00000360439 METP08581 1390 aa11.87□□□□□ -0.51
SIN3A-201ENST00000360439 HDAC1Q13547 482 aaPredicted RBP11.87□□□□□ -0.51
SIN3A-201ENST00000360439 PLEKHG1Q9ULL1 1385 aa11.87□□□□□ -0.51
SIN3A-201ENST00000360439 ZSCAN30Q86W11 494 aa11.87□□□□□ -0.51
SIN3A-201ENST00000360439 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
SIN3A-201ENST00000360439 STARD3NLO95772 234 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 IGHDP01880 384 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 TWISTNBQ3B726 338 aaPredicted RBP11.86□□□□□ -0.51
SIN3A-201ENST00000360439 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 CWC15Q9P013 229 aaKnown RBP11.86□□□□□ -0.51
SIN3A-201ENST00000360439 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
SIN3A-201ENST00000360439 GPS2Q13227 327 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
SIN3A-201ENST00000360439 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 USP21Q9UK80 565 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 RABEP1Q15276 862 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 ARMCX6Q7L4S7 300 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
SIN3A-201ENST00000360439 GPATCH3Q96I76 525 aa11.86□□□□□ -0.51
SIN3A-201ENST00000360439 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
SIN3A-201ENST00000360439 KCNG1Q9UIX4 513 aa11.85□□□□□ -0.51
SIN3A-201ENST00000360439 DDX49Q9Y6V7 483 aaKnown RBP11.85□□□□□ -0.51
SIN3A-201ENST00000360439 PTPRTO14522 1441 aa11.85□□□□□ -0.51
SIN3A-201ENST00000360439 NFE2L2Q16236 605 aa11.85□□□□□ -0.51
SIN3A-201ENST00000360439 TET3O43151 1660 aa11.85□□□□□ -0.51
SIN3A-201ENST00000360439 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
SIN3A-201ENST00000360439 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
SIN3A-201ENST00000360439 UTP14CQ5TAP6 766 aaKnown RBP11.85□□□□□ -0.51
SIN3A-201ENST00000360439 CHD1LQ86WJ1 897 aa11.85□□□□□ -0.51
SIN3A-201ENST00000360439 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
SIN3A-201ENST00000360439 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
SIN3A-201ENST00000360439 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
SIN3A-201ENST00000360439 CCDC173Q0VFZ6 552 aa11.84□□□□□ -0.51
SIN3A-201ENST00000360439 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
SIN3A-201ENST00000360439 HMGB2P26583 209 aaKnown RBP11.84□□□□□ -0.51
SIN3A-201ENST00000360439 STK11IPQ8N1F8 1099 aa11.84□□□□□ -0.51
SIN3A-201ENST00000360439 LNPKQ9C0E8 428 aa11.84□□□□□ -0.51
SIN3A-201ENST00000360439 MADDQ8WXG6 1647 aa11.84□□□□□ -0.51
SIN3A-201ENST00000360439 IL2RBP14784 551 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 LRCH2Q5VUJ6 765 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 TBC1D2Q9BYX2 928 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 XRCC6P12956 609 aaKnown RBP eCLIP11.83□□□□□ -0.52
SIN3A-201ENST00000360439 GIMAP7Q8NHV1 300 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 RBM28Q9NW13 759 aaKnown RBP11.83□□□□□ -0.52
SIN3A-201ENST00000360439 ZPR1O75312 459 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 HMGN5P82970 282 aaKnown RBP11.83□□□□□ -0.52
SIN3A-201ENST00000360439 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
SIN3A-201ENST00000360439 ZNF513Q8N8E2 541 aaPredicted RBP11.83□□□□□ -0.52
SIN3A-201ENST00000360439 DRC1Q96MC2 740 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 ABCC3O15438 1527 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 K7ELQ4 463 aaPredicted RBP11.83□□□□□ -0.52
SIN3A-201ENST00000360439 IBSPP21815 317 aaPredicted RBP11.83□□□□□ -0.52
SIN3A-201ENST00000360439 SKAP1Q86WV1 359 aa11.83□□□□□ -0.52
SIN3A-201ENST00000360439 DIP2BQ9P265 1576 aa11.82□□□□□ -0.52
SIN3A-201ENST00000360439 CDC42BPBQ9Y5S2 1711 aa11.82□□□□□ -0.52
SIN3A-201ENST00000360439 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
SIN3A-201ENST00000360439 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.521e-7■■■■■ 32.5
SIN3A-201ENST00000360439 DRC7Q8IY82 874 aa11.82□□□□□ -0.52
SIN3A-201ENST00000360439 NEFHP12036 1026 aa11.82□□□□□ -0.52
SIN3A-201ENST00000360439 RNF17Q9BXT8 1623 aaKnown RBP11.82□□□□□ -0.52
SIN3A-201ENST00000360439 RDXP35241 583 aaKnown RBP11.81□□□□□ -0.52
SIN3A-201ENST00000360439 RSPH14Q9UHP6 348 aa11.81□□□□□ -0.52
SIN3A-201ENST00000360439 ZFYVE9O95405 1425 aa11.81□□□□□ -0.52
SIN3A-201ENST00000360439 MCM2P49736 904 aa11.81□□□□□ -0.52
SIN3A-201ENST00000360439 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms