RNA–Protein interactions for RNA: ENST00000360027.4

SH2D1A-201, Transcript of SH2 domain containing 1A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH2D1A, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1A-201ENST00000360027 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
SH2D1A-201ENST00000360027 C1orf141Q5JVX7 400 aa13.6□□□□□ -0.23
SH2D1A-201ENST00000360027 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
SH2D1A-201ENST00000360027 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
SH2D1A-201ENST00000360027 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
SH2D1A-201ENST00000360027 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
SH2D1A-201ENST00000360027 PALLDQ8WX93 1383 aa13.59□□□□□ -0.23
SH2D1A-201ENST00000360027 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
SH2D1A-201ENST00000360027 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
SH2D1A-201ENST00000360027 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
SH2D1A-201ENST00000360027 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
SH2D1A-201ENST00000360027 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.23
SH2D1A-201ENST00000360027 PPP2R1AP30153 589 aa13.58□□□□□ -0.24
SH2D1A-201ENST00000360027 FLAD1Q8NFF5 587 aa13.58□□□□□ -0.24
SH2D1A-201ENST00000360027 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
SH2D1A-201ENST00000360027 PAPPAQ13219 1627 aa13.57□□□□□ -0.24
SH2D1A-201ENST00000360027 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
SH2D1A-201ENST00000360027 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
SH2D1A-201ENST00000360027 BTAF1O14981 1849 aa13.56□□□□□ -0.24
SH2D1A-201ENST00000360027 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
SH2D1A-201ENST00000360027 LOC102724428A0A0B4J2F2 783 aa13.55□□□□□ -0.24
SH2D1A-201ENST00000360027 SIK1P57059 783 aa13.55□□□□□ -0.24
SH2D1A-201ENST00000360027 RALBP1Q15311 655 aa13.55□□□□□ -0.24
SH2D1A-201ENST00000360027 SGIP1Q9BQI5 828 aa13.55□□□□□ -0.24
SH2D1A-201ENST00000360027 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
SH2D1A-201ENST00000360027 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
SH2D1A-201ENST00000360027 FCHSD2O94868 740 aa13.54□□□□□ -0.24
SH2D1A-201ENST00000360027 PTGER2P43116 358 aa13.54□□□□□ -0.24
SH2D1A-201ENST00000360027 CABP4P57796 275 aa13.54□□□□□ -0.24
SH2D1A-201ENST00000360027 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
SH2D1A-201ENST00000360027 ASAP1Q9ULH1 1129 aa13.54□□□□□ -0.24
SH2D1A-201ENST00000360027 KDM6AO15550 1401 aaPredicted RBP13.54□□□□□ -0.24
SH2D1A-201ENST00000360027 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
SH2D1A-201ENST00000360027 HMOX1P09601 288 aa13.53□□□□□ -0.24
SH2D1A-201ENST00000360027 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
SH2D1A-201ENST00000360027 U2SURPO15042 1029 aaKnown RBP13.52□□□□□ -0.25
SH2D1A-201ENST00000360027 MTHFSDQ2M296 383 aaKnown RBP13.52□□□□□ -0.25
SH2D1A-201ENST00000360027 RC3H1Q5TC82 1133 aaKnown RBP13.52□□□□□ -0.25
SH2D1A-201ENST00000360027 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
SH2D1A-201ENST00000360027 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
SH2D1A-201ENST00000360027 SLC52A2Q9HAB3 445 aa13.52□□□□□ -0.25
SH2D1A-201ENST00000360027 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
SH2D1A-201ENST00000360027 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
SH2D1A-201ENST00000360027 RNMTO43148 476 aaKnown RBP13.51□□□□□ -0.25
SH2D1A-201ENST00000360027 ZBTB7AO95365 584 aa13.51□□□□□ -0.25
SH2D1A-201ENST00000360027 SSFA2P28290 1259 aa13.51□□□□□ -0.25
SH2D1A-201ENST00000360027 NFATC2IPQ8NCF5 419 aa13.51□□□□□ -0.25
SH2D1A-201ENST00000360027 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
SH2D1A-201ENST00000360027 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
SH2D1A-201ENST00000360027 LY75O60449 1722 aa13.5□□□□□ -0.25
SH2D1A-201ENST00000360027 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
SH2D1A-201ENST00000360027 KCNQ4P56696 695 aa13.5□□□□□ -0.25
SH2D1A-201ENST00000360027 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
SH2D1A-201ENST00000360027 GNAT3A8MTJ3 354 aa13.49□□□□□ -0.25
SH2D1A-201ENST00000360027 AK7Q96M32 723 aa13.49□□□□□ -0.25
SH2D1A-201ENST00000360027 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
SH2D1A-201ENST00000360027 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 U2AF1L5P0DN76 240 aaPredicted RBP13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 POLD1P28340 1107 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 U2AF1Q01081 240 aaKnown RBP eCLIP13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 ITPK1Q13572 414 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 CNGB1Q14028 1251 aaPredicted RBP13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 COL23A1Q86Y22 540 aaPredicted RBP13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 LGR6Q9HBX8 967 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 MRC1P22897 1456 aa13.48□□□□□ -0.25
SH2D1A-201ENST00000360027 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
SH2D1A-201ENST00000360027 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
SH2D1A-201ENST00000360027 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
SH2D1A-201ENST00000360027 ARXQ96QS3 562 aa13.47□□□□□ -0.25
SH2D1A-201ENST00000360027 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.25
SH2D1A-201ENST00000360027 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.26
SH2D1A-201ENST00000360027 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
SH2D1A-201ENST00000360027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.45□□□□□ -0.26
SH2D1A-201ENST00000360027 IL17REQ8NFR9 667 aa13.45□□□□□ -0.26
SH2D1A-201ENST00000360027 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
SH2D1A-201ENST00000360027 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
SH2D1A-201ENST00000360027 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
SH2D1A-201ENST00000360027 NEFMP07197 916 aa13.44□□□□□ -0.26
SH2D1A-201ENST00000360027 SYT17Q9BSW7 474 aa13.44□□□□□ -0.26
SH2D1A-201ENST00000360027 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
SH2D1A-201ENST00000360027 MYBBP1AQ9BQG0 1328 aaKnown RBP13.43□□□□□ -0.26
SH2D1A-201ENST00000360027 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
SH2D1A-201ENST00000360027 TEFQ10587 303 aa13.43□□□□□ -0.26
SH2D1A-201ENST00000360027 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
SH2D1A-201ENST00000360027 TEX13AQ9BXU3 409 aaPredicted RBP13.43□□□□□ -0.26
SH2D1A-201ENST00000360027 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
SH2D1A-201ENST00000360027 GNPATO15228 680 aa13.42□□□□□ -0.26
SH2D1A-201ENST00000360027 PTCD1O75127 700 aaKnown RBP13.42□□□□□ -0.26
SH2D1A-201ENST00000360027 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
SH2D1A-201ENST00000360027 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
SH2D1A-201ENST00000360027 FHDC1Q9C0D6 1143 aaPredicted RBP13.42□□□□□ -0.26
SH2D1A-201ENST00000360027 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
SH2D1A-201ENST00000360027 ITGB4P16144 1822 aa13.41□□□□□ -0.26
SH2D1A-201ENST00000360027 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
SH2D1A-201ENST00000360027 ZNF790Q6PG37 636 aa13.41□□□□□ -0.26
SH2D1A-201ENST00000360027 AMIGO3Q86WK7 504 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms