RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 KMT5BQ4FZB7 885 aa9.08□□□□□ -0.96
APP-206ENST00000359726 DNTTIP2Q5QJE6 756 aaKnown RBP9.08□□□□□ -0.96
APP-206ENST00000359726 TSPYL6Q8N831 410 aa9.08□□□□□ -0.96
APP-206ENST00000359726 SYAP1Q96A49 352 aaPredicted RBP9.08□□□□□ -0.96
APP-206ENST00000359726 ZNF446Q9NWS9 450 aa9.08□□□□□ -0.96
APP-206ENST00000359726 PALD1Q9ULE6 856 aa9.08□□□□□ -0.96
APP-206ENST00000359726 CPSF1Q10570 1443 aaKnown RBP9.08□□□□□ -0.96
APP-206ENST00000359726 PTMAP06454 111 aaKnown RBP9.08□□□□□ -0.96
APP-206ENST00000359726 ANKRD44Q8N8A2 993 aa9.08□□□□□ -0.96
APP-206ENST00000359726 SRCIN1Q9C0H9 1055 aa9.07□□□□□ -0.96
APP-206ENST00000359726 C14orf93Q9H972 538 aaKnown RBP9.07□□□□□ -0.96
APP-206ENST00000359726 TPM3P06753 285 aa9.07□□□□□ -0.96
APP-206ENST00000359726 ZFYVE9O95405 1425 aa9.07□□□□□ -0.96
APP-206ENST00000359726 RGPD1P0DJD0 1748 aa9.07□□□□□ -0.96
APP-206ENST00000359726 MCM2P49736 904 aa9.07□□□□□ -0.96
APP-206ENST00000359726 SLFNL1Q499Z3 407 aa9.07□□□□□ -0.96
APP-206ENST00000359726 GDPD2Q9HCC8 539 aa9.07□□□□□ -0.96
APP-206ENST00000359726 KCND1Q9NSA2 647 aa9.07□□□□□ -0.96
APP-206ENST00000359726 FAM208AQ9UK61 1670 aaKnown RBP9.07□□□□□ -0.96
APP-206ENST00000359726 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
APP-206ENST00000359726 CYP2C19P33261 490 aa9.06□□□□□ -0.96
APP-206ENST00000359726 ANAPC15P60006 121 aa9.06□□□□□ -0.96
APP-206ENST00000359726 ZNF771Q7L3S4 317 aaPredicted RBP9.06□□□□□ -0.96
APP-206ENST00000359726 PLA2G4DQ86XP0 818 aa9.06□□□□□ -0.96
APP-206ENST00000359726 ERC2O15083 957 aa9.06□□□□□ -0.96
APP-206ENST00000359726 KCNJ4P48050 445 aa9.06□□□□□ -0.96
APP-206ENST00000359726 DNAJC2Q99543 621 aaKnown RBP9.06□□□□□ -0.96
APP-206ENST00000359726 PTPRMP28827 1452 aa9.06□□□□□ -0.96
APP-206ENST00000359726 CEP85Q6P2H3 762 aa9.06□□□□□ -0.96
APP-206ENST00000359726 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
APP-206ENST00000359726 CREBRFQ8IUR6 639 aa9.06□□□□□ -0.96
APP-206ENST00000359726 UBXN6Q9BZV1 441 aa9.06□□□□□ -0.96
APP-206ENST00000359726 MYO5BQ9ULV0 1848 aa9.05□□□□□ -0.96
APP-206ENST00000359726 TIGD1Q96MW7 591 aa9.05□□□□□ -0.96
APP-206ENST00000359726 UBE2HP62256 183 aa9.05□□□□□ -0.96
APP-206ENST00000359726 RBM43Q6ZSC3 357 aaKnown RBP9.05□□□□□ -0.96
APP-206ENST00000359726 REC8O95072 547 aa9.04□□□□□ -0.96
APP-206ENST00000359726 TTC14Q96N46 770 aa9.04□□□□□ -0.96
APP-206ENST00000359726 FEZ2Q9UHY8 353 aaPredicted RBP9.04□□□□□ -0.96
APP-206ENST00000359726 CNPY2Q9Y2B0 182 aa9.04□□□□□ -0.96
APP-206ENST00000359726 RAD50Q92878 1312 aa9.04□□□□□ -0.96
APP-206ENST00000359726 YTHDC2Q9H6S0 1430 aaKnown RBP9.04□□□□□ -0.96
APP-206ENST00000359726 PTGS1P23219 599 aa9.04□□□□□ -0.96
APP-206ENST00000359726 ERCC6L2Q5T890 1561 aa9.04□□□□□ -0.96
APP-206ENST00000359726 H2AFXP16104 143 aaPredicted RBP9.04□□□□□ -0.96
APP-206ENST00000359726 FOXD4L5Q5VV16 416 aaPredicted RBP9.04□□□□□ -0.96
APP-206ENST00000359726 KRT222Q8N1A0 295 aa9.04□□□□□ -0.96
APP-206ENST00000359726 FOXD4L4Q8WXT5 416 aaPredicted RBP9.04□□□□□ -0.96
APP-206ENST00000359726 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
APP-206ENST00000359726 PAXBP1Q9Y5B6 917 aa9.04□□□□□ -0.96
APP-206ENST00000359726 CFAP65Q6ZU64 1925 aaKnown RBP9.04□□□□□ -0.96
APP-206ENST00000359726 WDR33Q9C0J8 1336 aaKnown RBP9.03□□□□□ -0.96
APP-206ENST00000359726 NEK4P51957 841 aa9.03□□□□□ -0.96
APP-206ENST00000359726 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
APP-206ENST00000359726 IL25Q9H293 177 aa9.03□□□□□ -0.96
APP-206ENST00000359726 IFT57Q9NWB7 429 aa9.03□□□□□ -0.96
APP-206ENST00000359726 PTPRCP08575 1304 aa9.03□□□□□ -0.96
APP-206ENST00000359726 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
APP-206ENST00000359726 LRMPQ12912 555 aa9.03□□□□□ -0.96
APP-206ENST00000359726 FBXO38Q6PIJ6 1188 aa9.03□□□□□ -0.96
APP-206ENST00000359726 ZNF397Q8NF99 534 aaPredicted RBP9.03□□□□□ -0.96
APP-206ENST00000359726 MBIPQ9NS73 344 aa9.03□□□□□ -0.96
APP-206ENST00000359726 ATG3Q9NT62 314 aa9.03□□□□□ -0.96
APP-206ENST00000359726 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.03□□□□□ -0.96
APP-206ENST00000359726 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
APP-206ENST00000359726 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
APP-206ENST00000359726 CCDC66A2RUB6 948 aa9.02□□□□□ -0.96
APP-206ENST00000359726 EPB41L2O43491 1005 aaKnown RBP9.02□□□□□ -0.96
APP-206ENST00000359726 ZSCAN25Q6NSZ9 544 aa9.02□□□□□ -0.96
APP-206ENST00000359726 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.96
APP-206ENST00000359726 MON2Q7Z3U7 1717 aa9.02□□□□□ -0.96
APP-206ENST00000359726 MSH6P52701 1360 aa9.02□□□□□ -0.97
APP-206ENST00000359726 FCHSD2O94868 740 aa9.02□□□□□ -0.97
APP-206ENST00000359726 LRRC37A3O60309 1634 aa9.02□□□□□ -0.97
APP-206ENST00000359726 FYB1O15117 783 aa9.02□□□□□ -0.97
APP-206ENST00000359726 RPAP2Q8IXW5 612 aaPredicted RBP9.02□□□□□ -0.97
APP-206ENST00000359726 NRBP1Q9UHY1 535 aa9.02□□□□□ -0.97
APP-206ENST00000359726 TTC21BQ7Z4L5 1316 aa9.01□□□□□ -0.97
APP-206ENST00000359726 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
APP-206ENST00000359726 PDE1AP54750 535 aa9.01□□□□□ -0.97
APP-206ENST00000359726 GIMAP6Q6P9H5 292 aa9.01□□□□□ -0.97
APP-206ENST00000359726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.01□□□□□ -0.97
APP-206ENST00000359726 C8orf58Q8NAV2 365 aa9.01□□□□□ -0.97
APP-206ENST00000359726 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
APP-206ENST00000359726 CACNA1FO60840 1977 aa9.01□□□□□ -0.97
APP-206ENST00000359726 CDC25BP30305 580 aa9.01□□□□□ -0.97
APP-206ENST00000359726 NOP2P46087 812 aaKnown RBP9.01□□□□□ -0.97
APP-206ENST00000359726 ST3GAL1Q11201 340 aa9.01□□□□□ -0.97
APP-206ENST00000359726 CCDC93Q567U6 631 aa9.01□□□□□ -0.97
APP-206ENST00000359726 PHACTR3Q96KR7 559 aa9.01□□□□□ -0.97
APP-206ENST00000359726 CALCOCO1Q9P1Z2 691 aa9.01□□□□□ -0.97
APP-206ENST00000359726 RIMS2Q9UQ26 1411 aa9.01□□□□□ -0.97
APP-206ENST00000359726 ZRANB2O95218 330 aaKnown RBP eCLIP9□□□□□ -0.97
APP-206ENST00000359726 FAM69CQ0P6D2 419 aa9□□□□□ -0.97
APP-206ENST00000359726 CHAF1AQ13111 956 aaPredicted RBP9□□□□□ -0.97
APP-206ENST00000359726 CCDC144BQ3MJ40 725 aa9□□□□□ -0.97
APP-206ENST00000359726 MUM1L1Q5H9M0 696 aa9□□□□□ -0.97
APP-206ENST00000359726 CCDC144CPQ8IYA2 1237 aa9□□□□□ -0.97
APP-206ENST00000359726 RGS22Q8NE09 1264 aa9□□□□□ -0.97
APP-206ENST00000359726 AKAP12Q02952 1782 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms