RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
PDLIM5-203ENST00000359265 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
PDLIM5-203ENST00000359265 THUMPD2Q9BTF0 503 aaKnown RBP17.93■□□□□ 0.46
PDLIM5-203ENST00000359265 CARD10Q9BWT7 1032 aa17.93■□□□□ 0.46
PDLIM5-203ENST00000359265 FHDC1Q9C0D6 1143 aaPredicted RBP17.93■□□□□ 0.46
PDLIM5-203ENST00000359265 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
PDLIM5-203ENST00000359265 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
PDLIM5-203ENST00000359265 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
PDLIM5-203ENST00000359265 ATF5Q9Y2D1 282 aaPredicted RBP17.92■□□□□ 0.46
PDLIM5-203ENST00000359265 WNK3Q9BYP7 1800 aa17.92■□□□□ 0.46
PDLIM5-203ENST00000359265 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
PDLIM5-203ENST00000359265 ERICH6BQ5W0A0 696 aa17.91■□□□□ 0.46
PDLIM5-203ENST00000359265 LARP1Q6PKG0 1096 aaKnown RBP17.91■□□□□ 0.46
PDLIM5-203ENST00000359265 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
PDLIM5-203ENST00000359265 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
PDLIM5-203ENST00000359265 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
PDLIM5-203ENST00000359265 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
PDLIM5-203ENST00000359265 TATP17735 454 aaPredicted RBP17.9■□□□□ 0.46
PDLIM5-203ENST00000359265 DCTN1Q14203 1278 aa17.9■□□□□ 0.46
PDLIM5-203ENST00000359265 CFAP44Q96MT7 982 aa17.9■□□□□ 0.46
PDLIM5-203ENST00000359265 MEGF6O75095 1541 aa17.89■□□□□ 0.45
PDLIM5-203ENST00000359265 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
PDLIM5-203ENST00000359265 IRX6P78412 446 aaPredicted RBP17.89■□□□□ 0.45
PDLIM5-203ENST00000359265 MCM10Q7L590 875 aa17.89■□□□□ 0.45
PDLIM5-203ENST00000359265 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
PDLIM5-203ENST00000359265 SIPA1L3O60292 1781 aaPredicted RBP17.89■□□□□ 0.45
PDLIM5-203ENST00000359265 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
PDLIM5-203ENST00000359265 EXOSC9Q06265 439 aaKnown RBP17.88■□□□□ 0.45
PDLIM5-203ENST00000359265 ZNF530Q6P9A1 599 aaPredicted RBP17.88■□□□□ 0.45
PDLIM5-203ENST00000359265 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
PDLIM5-203ENST00000359265 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
PDLIM5-203ENST00000359265 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
PDLIM5-203ENST00000359265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.454e-6■■■□□ 18.5
PDLIM5-203ENST00000359265 IL2RBP14784 551 aa17.86■□□□□ 0.45
PDLIM5-203ENST00000359265 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
PDLIM5-203ENST00000359265 SPG7Q9UQ90 795 aa17.86■□□□□ 0.45
PDLIM5-203ENST00000359265 THRAP3Q9Y2W1 955 aaKnown RBP17.86■□□□□ 0.45
PDLIM5-203ENST00000359265 SHANK3Q9BYB0 1731 aa17.86■□□□□ 0.45
PDLIM5-203ENST00000359265 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
PDLIM5-203ENST00000359265 USP35Q9P2H5 1018 aa17.84■□□□□ 0.45
PDLIM5-203ENST00000359265 CHL1O00533 1208 aa17.83■□□□□ 0.44
PDLIM5-203ENST00000359265 RARSP54136 660 aaKnown RBP17.83■□□□□ 0.44
PDLIM5-203ENST00000359265 ZNF428Q96B54 188 aa17.83■□□□□ 0.44
PDLIM5-203ENST00000359265 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
PDLIM5-203ENST00000359265 CDCA7Q9BWT1 371 aaPredicted RBP17.83■□□□□ 0.44
PDLIM5-203ENST00000359265 PROM2Q8N271 834 aa17.82■□□□□ 0.44
PDLIM5-203ENST00000359265 IL17REQ8NFR9 667 aa17.82■□□□□ 0.44
PDLIM5-203ENST00000359265 BABAM1Q9NWV8 329 aa17.82■□□□□ 0.44
PDLIM5-203ENST00000359265 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
PDLIM5-203ENST00000359265 PCDH11XQ9BZA7 1347 aa17.81■□□□□ 0.44
PDLIM5-203ENST00000359265 PCDH11YQ9BZA8 1340 aa17.81■□□□□ 0.44
PDLIM5-203ENST00000359265 PTF1AQ7RTS3 328 aa17.81■□□□□ 0.44
PDLIM5-203ENST00000359265 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
PDLIM5-203ENST00000359265 BCAR3O75815 825 aa17.8■□□□□ 0.44
PDLIM5-203ENST00000359265 CANXP27824 592 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-203ENST00000359265 BARGINQ6ZT62 677 aa17.8■□□□□ 0.44
PDLIM5-203ENST00000359265 ZCRB1Q8TBF4 217 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-203ENST00000359265 PLSCR1O15162 318 aa17.79■□□□□ 0.44
PDLIM5-203ENST00000359265 PLIN1O60240 522 aa17.79■□□□□ 0.44
PDLIM5-203ENST00000359265 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-203ENST00000359265 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
PDLIM5-203ENST00000359265 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
PDLIM5-203ENST00000359265 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
PDLIM5-203ENST00000359265 MRC1P22897 1456 aa17.78■□□□□ 0.44
PDLIM5-203ENST00000359265 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-203ENST00000359265 TEFQ10587 303 aa17.78■□□□□ 0.44
PDLIM5-203ENST00000359265 TWISTNBQ3B726 338 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-203ENST00000359265 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
PDLIM5-203ENST00000359265 SMC4Q9NTJ3 1288 aa17.78■□□□□ 0.44
PDLIM5-203ENST00000359265 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
PDLIM5-203ENST00000359265 PHKG2P15735 406 aa17.77■□□□□ 0.44
PDLIM5-203ENST00000359265 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
PDLIM5-203ENST00000359265 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
PDLIM5-203ENST00000359265 KDM6AO15550 1401 aaPredicted RBP17.76■□□□□ 0.43
PDLIM5-203ENST00000359265 VAMP4O75379 141 aa17.76■□□□□ 0.43
PDLIM5-203ENST00000359265 GPR162Q16538 588 aa17.76■□□□□ 0.43
PDLIM5-203ENST00000359265 MPRIPQ6WCQ1 1025 aa17.76■□□□□ 0.43
PDLIM5-203ENST00000359265 BCL2L13Q9BXK5 485 aa17.76■□□□□ 0.43
PDLIM5-203ENST00000359265 BCL11BQ9C0K0 894 aaPredicted RBP17.76■□□□□ 0.43
PDLIM5-203ENST00000359265 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
PDLIM5-203ENST00000359265 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
PDLIM5-203ENST00000359265 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
PDLIM5-203ENST00000359265 LGR6Q9HBX8 967 aa17.75■□□□□ 0.43
PDLIM5-203ENST00000359265 SOS1Q07889 1333 aaPredicted RBP17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 RGPD3A6NKT7 1758 aaPredicted RBP17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 RGPD4Q7Z3J3 1758 aa17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 EXOC5O00471 708 aa17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 PDE3AQ14432 1141 aa17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 SBF2Q86WG5 1849 aa17.74■□□□□ 0.43
PDLIM5-203ENST00000359265 CYP27B1O15528 508 aa17.73■□□□□ 0.43
PDLIM5-203ENST00000359265 MS4A1P11836 297 aa17.73■□□□□ 0.43
PDLIM5-203ENST00000359265 HSPA6P17066 643 aa17.73■□□□□ 0.43
PDLIM5-203ENST00000359265 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
PDLIM5-203ENST00000359265 CRBNQ96SW2 442 aa17.73■□□□□ 0.43
PDLIM5-203ENST00000359265 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
PDLIM5-203ENST00000359265 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
PDLIM5-203ENST00000359265 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms