RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 MAP3K12Q12852 859 aa15.25■□□□□ 0.03
NLRC3-202ENST00000359128 TAF7Q15545 349 aaPredicted RBP15.25■□□□□ 0.03
NLRC3-202ENST00000359128 MCM10Q7L590 875 aa15.25■□□□□ 0.03
NLRC3-202ENST00000359128 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
NLRC3-202ENST00000359128 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
NLRC3-202ENST00000359128 A0A087WZG4 1122 aa15.24■□□□□ 0.03
NLRC3-202ENST00000359128 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
NLRC3-202ENST00000359128 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
NLRC3-202ENST00000359128 SSR1P43307 286 aaKnown RBP15.24■□□□□ 0.03
NLRC3-202ENST00000359128 NUTM1Q86Y26 1132 aa15.24■□□□□ 0.03
NLRC3-202ENST00000359128 MYO1BO43795 1136 aa15.24■□□□□ 0.03
NLRC3-202ENST00000359128 VSIG10Q8N0Z9 540 aa15.24■□□□□ 0.03
NLRC3-202ENST00000359128 NASPP49321 788 aaPredicted RBP15.24■□□□□ 0.03
NLRC3-202ENST00000359128 CEBPAP49715 358 aaPredicted RBP15.24■□□□□ 0.03
NLRC3-202ENST00000359128 MVPQ14764 893 aaKnown RBP15.24■□□□□ 0.03
NLRC3-202ENST00000359128 CBFA2T2O43439 604 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 CHD1LQ86WJ1 897 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
NLRC3-202ENST00000359128 DDX46Q7L014 1031 aaKnown RBP15.23■□□□□ 0.03
NLRC3-202ENST00000359128 NAPBQ9H115 298 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 IQGAP2Q13576 1575 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 CDK13Q14004 1512 aaKnown RBP15.23■□□□□ 0.03
NLRC3-202ENST00000359128 TOM1O60784 492 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 KRT85P78386 507 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 MSH6P52701 1360 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 UBAP1LF5GYI3 381 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
NLRC3-202ENST00000359128 FEZ1Q99689 392 aa15.22■□□□□ 0.03
NLRC3-202ENST00000359128 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
NLRC3-202ENST00000359128 TEX13AQ9BXU3 409 aaPredicted RBP15.22■□□□□ 0.03
NLRC3-202ENST00000359128 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
NLRC3-202ENST00000359128 MPHOSPH6Q99547 160 aaKnown RBP15.22■□□□□ 0.03
NLRC3-202ENST00000359128 MAGI1Q96QZ7 1491 aaPredicted RBP15.22■□□□□ 0.03
NLRC3-202ENST00000359128 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.03
NLRC3-202ENST00000359128 DRC1Q96MC2 740 aa15.21■□□□□ 0.03
NLRC3-202ENST00000359128 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
NLRC3-202ENST00000359128 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
NLRC3-202ENST00000359128 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
NLRC3-202ENST00000359128 RANBP6O60518 1105 aaKnown RBP15.21■□□□□ 0.03
NLRC3-202ENST00000359128 KIF1BPQ96EK5 621 aa15.21■□□□□ 0.03
NLRC3-202ENST00000359128 CFAP45Q9UL16 551 aa15.21■□□□□ 0.03
NLRC3-202ENST00000359128 GOLGA6L10A6NI86 522 aa15.21■□□□□ 0.02
NLRC3-202ENST00000359128 CCDC192P0DO97 292 aa15.21■□□□□ 0.02
NLRC3-202ENST00000359128 CDC5LQ99459 802 aaKnown RBP15.21■□□□□ 0.02
NLRC3-202ENST00000359128 HYPKQ9NX55 129 aa15.21■□□□□ 0.02
NLRC3-202ENST00000359128 GPTP24298 496 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 MAP7D2Q96T17 732 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 RSPH6AQ9H0K4 717 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 KIAA0586Q9BVV6 1533 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
NLRC3-202ENST00000359128 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
NLRC3-202ENST00000359128 TSG101Q99816 390 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 CABP5Q9NP86 173 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
NLRC3-202ENST00000359128 NAIPQ13075 1403 aa15.19■□□□□ 0.02
NLRC3-202ENST00000359128 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
NLRC3-202ENST00000359128 CTCFLQ8NI51 663 aaPredicted RBP15.19■□□□□ 0.02
NLRC3-202ENST00000359128 GRM1Q13255 1194 aa15.19■□□□□ 0.02
NLRC3-202ENST00000359128 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
NLRC3-202ENST00000359128 ENOX2Q16206 610 aaKnown RBP15.19■□□□□ 0.02
NLRC3-202ENST00000359128 IQCA1Q86XH1 822 aa15.19■□□□□ 0.02
NLRC3-202ENST00000359128 NME9Q86XW9 330 aa15.19■□□□□ 0.02
NLRC3-202ENST00000359128 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
NLRC3-202ENST00000359128 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
NLRC3-202ENST00000359128 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
NLRC3-202ENST00000359128 WASLO00401 505 aaPredicted RBP15.18■□□□□ 0.02
NLRC3-202ENST00000359128 HLA-DOAP06340 250 aa15.18■□□□□ 0.02
NLRC3-202ENST00000359128 TMEM266Q2M3C6 531 aa15.18■□□□□ 0.02
NLRC3-202ENST00000359128 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
NLRC3-202ENST00000359128 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
NLRC3-202ENST00000359128 CCDC196A0A1B0GTZ2 297 aa15.18■□□□□ 0.02
NLRC3-202ENST00000359128 IFNL2Q8IZJ0 200 aa15.18■□□□□ 0.02
NLRC3-202ENST00000359128 DENND4BO75064 1496 aaPredicted RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 K7ELQ4 463 aaPredicted RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 EIF5P55010 431 aaKnown RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 LIG1P18858 919 aa15.17■□□□□ 0.02
NLRC3-202ENST00000359128 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
NLRC3-202ENST00000359128 CA8P35219 290 aa15.17■□□□□ 0.02
NLRC3-202ENST00000359128 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 SPTY2D1Q68D10 685 aaPredicted RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
NLRC3-202ENST00000359128 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 BAG4O95429 457 aaKnown RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 AXDND1Q5T1B0 1012 aaPredicted RBP15.17■□□□□ 0.02
NLRC3-202ENST00000359128 RAB34Q9BZG1 259 aa15.17■□□□□ 0.02
NLRC3-202ENST00000359128 LDHCP07864 332 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 FAM43AQ8N2R8 423 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 TIAM1Q13009 1591 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 BAG3O95817 575 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 ZBTB3Q9H5J0 574 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 DDX11Q96FC9 970 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 SLC12A7Q9Y666 1083 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
NLRC3-202ENST00000359128 CETN2P41208 172 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms