RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 TRAK2O60296 914 aa18.33■□□□□ 0.52
USP6-202ENST00000357482 APBA3O96018 575 aa18.33■□□□□ 0.52
USP6-202ENST00000357482 NLRP2Q9NX02 1062 aa18.32■□□□□ 0.52
USP6-202ENST00000357482 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
USP6-202ENST00000357482 CDCA7Q9BWT1 371 aaPredicted RBP18.31■□□□□ 0.52
USP6-202ENST00000357482 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
USP6-202ENST00000357482 MYOM1P52179 1685 aa18.31■□□□□ 0.52
USP6-202ENST00000357482 ZNF500O60304 480 aaPredicted RBP18.3■□□□□ 0.52
USP6-202ENST00000357482 OVOS2A0A0G2JMS6 1433 aa18.3■□□□□ 0.52
USP6-202ENST00000357482 ERBB3P21860 1342 aa18.3■□□□□ 0.52
USP6-202ENST00000357482 UQCRHLA0A096LP55 91 aa18.29■□□□□ 0.52
USP6-202ENST00000357482 UQCRHP07919 91 aa18.29■□□□□ 0.52
USP6-202ENST00000357482 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
USP6-202ENST00000357482 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
USP6-202ENST00000357482 WNK3Q9BYP7 1800 aa18.29■□□□□ 0.52
USP6-202ENST00000357482 DISP2A7MBM2 1401 aa18.28■□□□□ 0.52
USP6-202ENST00000357482 IRX3P78415 501 aaPredicted RBP18.28■□□□□ 0.52
USP6-202ENST00000357482 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
USP6-202ENST00000357482 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
USP6-202ENST00000357482 PSDA5PKW4 1024 aaPredicted RBP18.27■□□□□ 0.52
USP6-202ENST00000357482 EXOC5O00471 708 aa18.27■□□□□ 0.52
USP6-202ENST00000357482 AMPHP49418 695 aa18.27■□□□□ 0.52
USP6-202ENST00000357482 DNTTIP2Q5QJE6 756 aaKnown RBP18.27■□□□□ 0.52
USP6-202ENST00000357482 MCM5P33992 734 aa18.27■□□□□ 0.51
USP6-202ENST00000357482 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.51
USP6-202ENST00000357482 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.51
USP6-202ENST00000357482 SKOR2Q2VWA4 1001 aaPredicted RBP18.26■□□□□ 0.51
USP6-202ENST00000357482 R3HCC1Q9Y3T6 440 aaKnown RBP18.26■□□□□ 0.51
USP6-202ENST00000357482 FBLN1P23142 703 aa18.25■□□□□ 0.51
USP6-202ENST00000357482 SASS6Q6UVJ0 657 aa18.25■□□□□ 0.51
USP6-202ENST00000357482 IP6K1Q92551 441 aa18.25■□□□□ 0.51
USP6-202ENST00000357482 DNAJC2Q99543 621 aaKnown RBP18.25■□□□□ 0.51
USP6-202ENST00000357482 FYB1O15117 783 aa18.25■□□□□ 0.51
USP6-202ENST00000357482 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
USP6-202ENST00000357482 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
USP6-202ENST00000357482 MARCH10Q8NA82 808 aaPredicted RBP18.24■□□□□ 0.51
USP6-202ENST00000357482 SECISBP2LQ93073 1101 aaKnown RBP18.24■□□□□ 0.51
USP6-202ENST00000357482 CHMP5Q9NZZ3 219 aa18.23■□□□□ 0.51
USP6-202ENST00000357482 PARD3Q8TEW0 1356 aa18.23■□□□□ 0.51
USP6-202ENST00000357482 IL2RBP14784 551 aa18.23■□□□□ 0.51
USP6-202ENST00000357482 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
USP6-202ENST00000357482 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
USP6-202ENST00000357482 PEAK1Q9H792 1746 aa18.23■□□□□ 0.51
USP6-202ENST00000357482 NSD3Q9BZ95 1437 aa18.22■□□□□ 0.51
USP6-202ENST00000357482 R3HDM1Q15032 1099 aaKnown RBP18.22■□□□□ 0.51
USP6-202ENST00000357482 RGS22Q8NE09 1264 aa18.22■□□□□ 0.51
USP6-202ENST00000357482 PANK3Q9H999 370 aa18.22■□□□□ 0.51
USP6-202ENST00000357482 KIF20BQ96Q89 1820 aa18.22■□□□□ 0.51
USP6-202ENST00000357482 TNS2Q63HR2 1409 aa18.22■□□□□ 0.51
USP6-202ENST00000357482 PER1O15534 1290 aaPredicted RBP18.21■□□□□ 0.51
USP6-202ENST00000357482 HOXC9P31274 260 aa18.21■□□□□ 0.51
USP6-202ENST00000357482 PLCD3Q8N3E9 789 aa18.21■□□□□ 0.51
USP6-202ENST00000357482 GZF1Q9H116 711 aaPredicted RBP18.2■□□□□ 0.5
USP6-202ENST00000357482 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
USP6-202ENST00000357482 SLKQ9H2G2 1235 aaPredicted RBP18.19■□□□□ 0.5
USP6-202ENST00000357482 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
USP6-202ENST00000357482 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
USP6-202ENST00000357482 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
USP6-202ENST00000357482 HOMEZQ8IX15 550 aa18.18■□□□□ 0.5
USP6-202ENST00000357482 CRBNQ96SW2 442 aa18.18■□□□□ 0.5
USP6-202ENST00000357482 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
USP6-202ENST00000357482 INSRP06213 1382 aa18.18■□□□□ 0.5
USP6-202ENST00000357482 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
USP6-202ENST00000357482 SBF2Q86WG5 1849 aa18.18■□□□□ 0.5
USP6-202ENST00000357482 MMP14P50281 582 aa18.17■□□□□ 0.5
USP6-202ENST00000357482 VGLL3A8MV65 326 aa18.17■□□□□ 0.5
USP6-202ENST00000357482 PTF1AQ7RTS3 328 aa18.17■□□□□ 0.5
USP6-202ENST00000357482 RREB1Q92766 1687 aa18.17■□□□□ 0.5
USP6-202ENST00000357482 CLGNO14967 610 aa18.16■□□□□ 0.5
USP6-202ENST00000357482 ACSBG1Q96GR2 724 aa18.16■□□□□ 0.5
USP6-202ENST00000357482 TSPYL1Q9H0U9 437 aa18.16■□□□□ 0.5
USP6-202ENST00000357482 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
USP6-202ENST00000357482 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
USP6-202ENST00000357482 RALBP1Q15311 655 aa18.15■□□□□ 0.5
USP6-202ENST00000357482 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
USP6-202ENST00000357482 IBTKQ9P2D0 1353 aaPredicted RBP18.15■□□□□ 0.5
USP6-202ENST00000357482 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
USP6-202ENST00000357482 NUP188Q5SRE5 1749 aa18.15■□□□□ 0.5
USP6-202ENST00000357482 BCL9O00512 1426 aa18.15■□□□□ 0.5
USP6-202ENST00000357482 PLSCR1O15162 318 aa18.13■□□□□ 0.49
USP6-202ENST00000357482 FLT4P35916 1363 aa18.13■□□□□ 0.49
USP6-202ENST00000357482 KCNQ2O43526 872 aa18.13■□□□□ 0.49
USP6-202ENST00000357482 AXDND1Q5T1B0 1012 aaPredicted RBP18.13■□□□□ 0.49
USP6-202ENST00000357482 DHX37Q8IY37 1157 aaKnown RBP18.13■□□□□ 0.49
USP6-202ENST00000357482 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
USP6-202ENST00000357482 HSP90AB2PQ58FF8 381 aa18.12■□□□□ 0.49
USP6-202ENST00000357482 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
USP6-202ENST00000357482 YY1AP1Q9H869 796 aa18.12■□□□□ 0.49
USP6-202ENST00000357482 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
USP6-202ENST00000357482 RBM25P49756 843 aaKnown RBP18.11■□□□□ 0.49
USP6-202ENST00000357482 EMILIN1Q9Y6C2 1016 aa18.11■□□□□ 0.49
USP6-202ENST00000357482 HMGN5P82970 282 aaKnown RBP18.11■□□□□ 0.49
USP6-202ENST00000357482 NBPF6Q5VWK0 638 aa18.11■□□□□ 0.49
USP6-202ENST00000357482 NBPF4Q96M43 638 aa18.11■□□□□ 0.49
USP6-202ENST00000357482 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
USP6-202ENST00000357482 RGPD3A6NKT7 1758 aaPredicted RBP18.1■□□□□ 0.49
USP6-202ENST00000357482 RGPD4Q7Z3J3 1758 aa18.1■□□□□ 0.49
USP6-202ENST00000357482 CCDC66A2RUB6 948 aa18.1■□□□□ 0.49
USP6-202ENST00000357482 NASPP49321 788 aaPredicted RBP18.1■□□□□ 0.49
USP6-202ENST00000357482 CC2D1BQ5T0F9 858 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms