RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 FCHSD2O94868 740 aa11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 SIK1P57059 783 aa11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 RALBP1Q15311 655 aa11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 NFATC2IPQ8NCF5 419 aa11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 MTFR1LQ9H019 292 aa11.36□□□□□ -0.59
MAP1LC3C-201ENST00000357246 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
MAP1LC3C-201ENST00000357246 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
MAP1LC3C-201ENST00000357246 RNMTO43148 476 aaKnown RBP11.35□□□□□ -0.59
MAP1LC3C-201ENST00000357246 LGR6Q9HBX8 967 aa11.35□□□□□ -0.59
MAP1LC3C-201ENST00000357246 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
MAP1LC3C-201ENST00000357246 ZBTB7AO95365 584 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 U2AF1L5P0DN76 240 aaPredicted RBP11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 PTGER2P43116 358 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 U2AF1Q01081 240 aaKnown RBP eCLIP11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 FLAD1Q8NFF5 587 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 GAS2L2Q8NHY3 880 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 SGIP1Q9BQI5 828 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 SLC52A2Q9HAB3 445 aa11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
MAP1LC3C-201ENST00000357246 C5P01031 1676 aa11.33□□□□□ -0.6
MAP1LC3C-201ENST00000357246 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
MAP1LC3C-201ENST00000357246 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
MAP1LC3C-201ENST00000357246 PHACTR3Q96KR7 559 aa11.33□□□□□ -0.6
MAP1LC3C-201ENST00000357246 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
MAP1LC3C-201ENST00000357246 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
MAP1LC3C-201ENST00000357246 PRKAR2BP31323 418 aa11.32□□□□□ -0.6
MAP1LC3C-201ENST00000357246 ITPK1Q13572 414 aa11.32□□□□□ -0.6
MAP1LC3C-201ENST00000357246 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
MAP1LC3C-201ENST00000357246 PPP1R1BQ9UD71 204 aaPredicted RBP11.32□□□□□ -0.6
MAP1LC3C-201ENST00000357246 ADAMTS7Q9UKP4 1686 aa11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 IL17REQ8NFR9 667 aa11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 C4BP0C0L5 1744 aa11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 COL24A1Q17RW2 1714 aa11.31□□□□□ -0.6
MAP1LC3C-201ENST00000357246 UBR3Q6ZT12 1888 aa11.3□□□□□ -0.6
MAP1LC3C-201ENST00000357246 AK7Q96M32 723 aa11.3□□□□□ -0.6
MAP1LC3C-201ENST00000357246 MAP3K5Q99683 1374 aa11.29□□□□□ -0.6
MAP1LC3C-201ENST00000357246 HTATSF1O43719 755 aaKnown RBP11.29□□□□□ -0.6
MAP1LC3C-201ENST00000357246 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
MAP1LC3C-201ENST00000357246 SSFA2P28290 1259 aa11.29□□□□□ -0.6
MAP1LC3C-201ENST00000357246 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
MAP1LC3C-201ENST00000357246 MYH14Q7Z406 1995 aaKnown RBP11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 MRC1P22897 1456 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 MSH5O43196 834 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 POLD1P28340 1107 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 AMIGO3Q86WK7 504 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
MAP1LC3C-201ENST00000357246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.27□□□□□ -0.61
MAP1LC3C-201ENST00000357246 YY1P25490 414 aa11.27□□□□□ -0.61
MAP1LC3C-201ENST00000357246 TEFQ10587 303 aa11.27□□□□□ -0.61
MAP1LC3C-201ENST00000357246 SLC39A6Q13433 755 aa11.27□□□□□ -0.61
MAP1LC3C-201ENST00000357246 SYT17Q9BSW7 474 aa11.27□□□□□ -0.61
MAP1LC3C-201ENST00000357246 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
MAP1LC3C-201ENST00000357246 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
MAP1LC3C-201ENST00000357246 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 GNPATO15228 680 aa11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 NEFMP07197 916 aa11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
MAP1LC3C-201ENST00000357246 CICQ96RK0 1608 aaPredicted RBP11.25□□□□□ -0.61
MAP1LC3C-201ENST00000357246 PHF14O94880 888 aa11.25□□□□□ -0.61
MAP1LC3C-201ENST00000357246 CRKLP46109 303 aaKnown RBP11.25□□□□□ -0.61
MAP1LC3C-201ENST00000357246 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
MAP1LC3C-201ENST00000357246 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
MAP1LC3C-201ENST00000357246 FHDC1Q9C0D6 1143 aaPredicted RBP11.25□□□□□ -0.61
MAP1LC3C-201ENST00000357246 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
MAP1LC3C-201ENST00000357246 CYP19A1P11511 503 aaPredicted RBP11.24□□□□□ -0.61
MAP1LC3C-201ENST00000357246 INTS5Q6P9B9 1019 aaKnown RBP11.24□□□□□ -0.61
MAP1LC3C-201ENST00000357246 DNAJC10Q8IXB1 793 aa11.24□□□□□ -0.61
MAP1LC3C-201ENST00000357246 TTC5Q8N0Z6 440 aa11.24□□□□□ -0.61
MAP1LC3C-201ENST00000357246 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
MAP1LC3C-201ENST00000357246 TEX13AQ9BXU3 409 aaPredicted RBP11.24□□□□□ -0.61
MAP1LC3C-201ENST00000357246 UBR2Q8IWV8 1755 aa11.23□□□□□ -0.61
MAP1LC3C-201ENST00000357246 BTBD11A6QL63 1104 aa11.23□□□□□ -0.61
MAP1LC3C-201ENST00000357246 MCM10Q7L590 875 aa11.23□□□□□ -0.61
MAP1LC3C-201ENST00000357246 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
MAP1LC3C-201ENST00000357246 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
MAP1LC3C-201ENST00000357246 TJP1Q07157 1748 aa11.23□□□□□ -0.61
MAP1LC3C-201ENST00000357246 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
MAP1LC3C-201ENST00000357246 RFC4P35249 363 aa11.22□□□□□ -0.61
MAP1LC3C-201ENST00000357246 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
MAP1LC3C-201ENST00000357246 NFE2L2Q16236 605 aa11.22□□□□□ -0.61
MAP1LC3C-201ENST00000357246 IFFO2Q5TF58 517 aa11.22□□□□□ -0.61
MAP1LC3C-201ENST00000357246 MSL1Q68DK7 614 aa11.22□□□□□ -0.61
MAP1LC3C-201ENST00000357246 NLGN1Q8N2Q7 840 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms