RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ANKRD26Q9UPS8 1709 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
TRIM38-201ENST00000357085 A2MP01023 1474 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 TSR1Q2NL82 804 aaKnown RBP7.74□□□□□ -1.17
TRIM38-201ENST00000357085 LUZP1Q86V48 1076 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 TRERF1Q96PN7 1200 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 KDM6BO15054 1643 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 MAGI3Q5TCQ9 1506 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 H3BQV1 296 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 PTPN14Q15678 1187 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 IFFO2Q5TF58 517 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 CCDC91Q7Z6B0 441 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 EHBP1Q8NDI1 1231 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 NUP62CLQ9H1M0 184 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 MYO6Q9UM54 1294 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 KIAA0754O94854 1291 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 STX1AQ16623 288 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 MICALCLQ6ZW33 695 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 CAGE1Q8TC20 777 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 TNMDQ9H2S6 317 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 MAGI2Q86UL8 1455 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 CNTROBQ8N137 903 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 CCDC191Q8NCU4 936 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 APBB1O00213 710 aa7.74□□□□□ -1.17
TRIM38-201ENST00000357085 SPATS2Q86XZ4 545 aaKnown RBP7.74□□□□□ -1.17
TRIM38-201ENST00000357085 GOLGA6L7A0A1B0GV03 622 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 BRMS1Q9HCU9 246 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 RAD50Q92878 1312 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 CEP135Q66GS9 1140 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 GPATCH11Q8N954 259 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 UBXN4Q92575 508 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 EFCC1Q9HA90 598 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 SYCP2Q9BX26 1530 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 NEK4P51957 841 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 BRPF1P55201 1214 aaPredicted RBP7.73□□□□□ -1.17
TRIM38-201ENST00000357085 IGSF3O75054 1194 aa7.73□□□□□ -1.17
TRIM38-201ENST00000357085 FKBP5Q13451 457 aaPredicted RBP7.73□□□□□ -1.17
TRIM38-201ENST00000357085 CCAR2Q8N163 923 aaKnown RBP7.73□□□□□ -1.17
TRIM38-201ENST00000357085 A0A1B0GUL7 405 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 RIOK3O14730 519 aaKnown RBP7.72□□□□□ -1.17
TRIM38-201ENST00000357085 FBLN2P98095 1184 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 CTCFLQ8NI51 663 aaPredicted RBP7.72□□□□□ -1.17
TRIM38-201ENST00000357085 MX1P20591 662 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 ERO1AQ96HE7 468 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 RSPH14Q9UHP6 348 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 GIMAP7Q8NHV1 300 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 RUFY1Q96T51 708 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 ABCA8O94911 1581 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 TTC31Q49AM3 519 aaPredicted RBP7.72□□□□□ -1.17
TRIM38-201ENST00000357085 FIBPO43427 364 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 IRX5P78411 483 aaPredicted RBP7.72□□□□□ -1.17
TRIM38-201ENST00000357085 CCDC83Q8IWF9 413 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 UTP14AQ9BVJ6 771 aaKnown RBP7.72□□□□□ -1.17
TRIM38-201ENST00000357085 NPHP3Q7Z494 1330 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 QRICH2Q9H0J4 1663 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 H0YHG0 523 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 TTC22Q5TAA0 569 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 TBC1D9Q6ZT07 1266 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 NUTM1Q86Y26 1132 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 KIF20BQ96Q89 1820 aa7.72□□□□□ -1.17
TRIM38-201ENST00000357085 PRG4Q92954 1404 aaPredicted RBP7.72□□□□□ -1.17
TRIM38-201ENST00000357085 RAB11FIP3O75154 756 aa7.71□□□□□ -1.17
TRIM38-201ENST00000357085 SMC2O95347 1197 aa7.71□□□□□ -1.17
TRIM38-201ENST00000357085 SMARCE1Q969G3 411 aa7.71□□□□□ -1.17
TRIM38-201ENST00000357085 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.17
TRIM38-201ENST00000357085 TRMT2AQ8IZ69 625 aaKnown RBP7.71□□□□□ -1.17
TRIM38-201ENST00000357085 OLFM4Q6UX06 510 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 BICD2Q8TD16 824 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 TTC12Q9H892 705 aaPredicted RBP7.71□□□□□ -1.18
TRIM38-201ENST00000357085 LRRFIP2Q9Y608 721 aaKnown RBP7.71□□□□□ -1.18
TRIM38-201ENST00000357085 PDLIM2Q96JY6 352 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 ZNF830Q96NB3 372 aaPredicted RBP7.71□□□□□ -1.18
TRIM38-201ENST00000357085 INCENPQ9NQS7 918 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 CLIP2Q9UDT6 1046 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 STAG3Q9UJ98 1225 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 USP19O94966 1318 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 HMG20BQ9P0W2 317 aa7.71□□□□□ -1.18
TRIM38-201ENST00000357085 ZNF622Q969S3 477 aaKnown RBP eCLIP7.71□□□□□ -1.182e-6■■■□□ 19.1
TRIM38-201ENST00000357085 ATP2B3Q16720 1220 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 ANO2Q9NQ90 1003 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 CLTCL1P53675 1640 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 ARHGEF10O15013 1369 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 FAM177BA6PVY3 158 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 NPHP1O15259 732 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 RPAINQ86UA6 219 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 CYP46A1Q9Y6A2 500 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 MED14O60244 1454 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 ITSN1Q15811 1721 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 SH3BGRP55822 239 aaPredicted RBP7.7□□□□□ -1.18
TRIM38-201ENST00000357085 RGS12O14924 1447 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 CDC25BP30305 580 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 POTEDQ86YR6 584 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 LMBRD1Q9NUN5 540 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 SPTLC3Q9NUV7 552 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 ANO10Q9NW15 660 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
TRIM38-201ENST00000357085 VPS37CA5D8V6 355 aaPredicted RBP7.7□□□□□ -1.18
TRIM38-201ENST00000357085 PER1O15534 1290 aaPredicted RBP7.7□□□□□ -1.18
TRIM38-201ENST00000357085 HMGB1P09429 215 aaKnown RBP7.7□□□□□ -1.18
TRIM38-201ENST00000357085 CPLX2Q6PUV4 134 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms