RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 TRMT2AQ8IZ69 625 aaKnown RBP18.3■□□□□ 0.52
STRN3-201ENST00000355683 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
STRN3-201ENST00000355683 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
STRN3-201ENST00000355683 GNAT3A8MTJ3 354 aa18.3■□□□□ 0.52
STRN3-201ENST00000355683 CHRNA2Q15822 529 aa18.3■□□□□ 0.52
STRN3-201ENST00000355683 KCNA6P17658 529 aa18.29■□□□□ 0.52
STRN3-201ENST00000355683 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
STRN3-201ENST00000355683 WASHC4Q2M389 1173 aa18.29■□□□□ 0.52
STRN3-201ENST00000355683 FAM173BQ6P4H8 233 aa18.29■□□□□ 0.52
STRN3-201ENST00000355683 GAS2L3Q86XJ1 694 aa18.29■□□□□ 0.52
STRN3-201ENST00000355683 MTMR7Q9Y216 660 aa18.29■□□□□ 0.52
STRN3-201ENST00000355683 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
STRN3-201ENST00000355683 PNMA6EA0A0J9YXQ4 647 aa18.28■□□□□ 0.52
STRN3-201ENST00000355683 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
STRN3-201ENST00000355683 CWF19L2Q2TBE0 894 aaKnown RBP18.28■□□□□ 0.52
STRN3-201ENST00000355683 USP25Q9UHP3 1055 aa18.28■□□□□ 0.52
STRN3-201ENST00000355683 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
STRN3-201ENST00000355683 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
STRN3-201ENST00000355683 PDE1AP54750 535 aa18.27■□□□□ 0.52
STRN3-201ENST00000355683 CEP85Q6P2H3 762 aa18.27■□□□□ 0.52
STRN3-201ENST00000355683 CKAP2LQ8IYA6 745 aa18.27■□□□□ 0.52
STRN3-201ENST00000355683 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
STRN3-201ENST00000355683 TMX3Q96JJ7 454 aa18.27■□□□□ 0.52
STRN3-201ENST00000355683 EYA1Q99502 592 aa18.27■□□□□ 0.52
STRN3-201ENST00000355683 GSPT1P15170 499 aaKnown RBP18.26■□□□□ 0.51
STRN3-201ENST00000355683 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
STRN3-201ENST00000355683 GOLGA6L6A8MZA4 724 aa18.26■□□□□ 0.51
STRN3-201ENST00000355683 NRDCO43847 1150 aa18.26■□□□□ 0.51
STRN3-201ENST00000355683 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
STRN3-201ENST00000355683 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.25■□□□□ 0.51
STRN3-201ENST00000355683 PRDM10Q9NQV6 1147 aa18.25■□□□□ 0.51
STRN3-201ENST00000355683 PRDM15P57071 1507 aaPredicted RBP18.25■□□□□ 0.51
STRN3-201ENST00000355683 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
STRN3-201ENST00000355683 SIRT2Q8IXJ6 389 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 SNRKQ9NRH2 765 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 TMEM2Q9UHN6 1383 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 MAP3K19Q56UN5 1328 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 IL13P35225 146 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 GLI2P10070 1586 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
STRN3-201ENST00000355683 BECN2A8MW95 431 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
STRN3-201ENST00000355683 ABCC3O15438 1527 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 ERVK-7P63135 1459 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 LARP1BQ659C4 914 aaKnown RBP18.23■□□□□ 0.51
STRN3-201ENST00000355683 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
STRN3-201ENST00000355683 KCNQ3O43525 872 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 EVA1CP58658 441 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 LGR6Q9HBX8 967 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 C17orf53Q8N3J3 647 aaPredicted RBP18.23■□□□□ 0.51
STRN3-201ENST00000355683 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
STRN3-201ENST00000355683 PHF14O94880 888 aa18.22■□□□□ 0.51
STRN3-201ENST00000355683 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
STRN3-201ENST00000355683 GIMAP6Q6P9H5 292 aa18.22■□□□□ 0.51
STRN3-201ENST00000355683 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
STRN3-201ENST00000355683 CCAR2Q8N163 923 aaKnown RBP18.22■□□□□ 0.51
STRN3-201ENST00000355683 TSPY26PQ9H489 355 aa18.22■□□□□ 0.51
STRN3-201ENST00000355683 TBX22Q9Y458 520 aa18.21■□□□□ 0.51
STRN3-201ENST00000355683 ZSCAN23Q3MJ62 389 aa18.21■□□□□ 0.51
STRN3-201ENST00000355683 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
STRN3-201ENST00000355683 MSH6P52701 1360 aa18.21■□□□□ 0.51
STRN3-201ENST00000355683 INSRP06213 1382 aa18.21■□□□□ 0.5
STRN3-201ENST00000355683 MAP3K2Q9Y2U5 619 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 ZNF771Q7L3S4 317 aaPredicted RBP18.2■□□□□ 0.5
STRN3-201ENST00000355683 DCTPP1Q9H773 170 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 PALD1Q9ULE6 856 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 DIP2CQ9Y2E4 1556 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 CHST3Q7LGC8 479 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 MYD88Q99836 296 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 TRIM5Q9C035 493 aa18.2■□□□□ 0.5
STRN3-201ENST00000355683 EDC3Q96F86 508 aaKnown RBP18.19■□□□□ 0.5
STRN3-201ENST00000355683 PDRG1Q9NUG6 133 aa18.19■□□□□ 0.5
STRN3-201ENST00000355683 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
STRN3-201ENST00000355683 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
STRN3-201ENST00000355683 CCT2P78371 535 aaKnown RBP18.19■□□□□ 0.5
STRN3-201ENST00000355683 HSP90AB3PQ58FF7 597 aa18.19■□□□□ 0.5
STRN3-201ENST00000355683 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
STRN3-201ENST00000355683 TSC1Q92574 1164 aa18.19■□□□□ 0.5
STRN3-201ENST00000355683 GOLGA6L19H0YKK7 550 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 KIDINS220Q9ULH0 1771 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 ISM2Q6H9L7 571 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 CYP46A1Q9Y6A2 500 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 UNC5CLQ8IV45 518 aa18.18■□□□□ 0.5
STRN3-201ENST00000355683 TTC12Q9H892 705 aaPredicted RBP18.18■□□□□ 0.5
STRN3-201ENST00000355683 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
STRN3-201ENST00000355683 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
STRN3-201ENST00000355683 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
STRN3-201ENST00000355683 PODXL2Q9NZ53 605 aa18.17■□□□□ 0.5
STRN3-201ENST00000355683 RAB11FIP3O75154 756 aa18.17■□□□□ 0.5
STRN3-201ENST00000355683 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
STRN3-201ENST00000355683 HAND2P61296 217 aa18.17■□□□□ 0.5
STRN3-201ENST00000355683 FILIP1Q7Z7B0 1213 aa18.17■□□□□ 0.5
STRN3-201ENST00000355683 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
STRN3-201ENST00000355683 CPLX1O14810 134 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms