RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
COMMD9-202ENST00000355500 MMP14P50281 582 aa10.25□□□□□ -0.77
COMMD9-202ENST00000355500 WAPLQ7Z5K2 1190 aa10.25□□□□□ -0.77
COMMD9-202ENST00000355500 GGNBP2Q9H3C7 697 aa10.25□□□□□ -0.77
COMMD9-202ENST00000355500 PIK3C2AO00443 1686 aa10.25□□□□□ -0.77
COMMD9-202ENST00000355500 PEAK1Q9H792 1746 aa10.24□□□□□ -0.77
COMMD9-202ENST00000355500 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
COMMD9-202ENST00000355500 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
COMMD9-202ENST00000355500 U2AF1L5P0DN76 240 aaPredicted RBP10.24□□□□□ -0.77
COMMD9-202ENST00000355500 RARSP54136 660 aaKnown RBP10.24□□□□□ -0.77
COMMD9-202ENST00000355500 U2AF1Q01081 240 aaKnown RBP eCLIP10.24□□□□□ -0.77
COMMD9-202ENST00000355500 POLKQ9UBT6 870 aa10.24□□□□□ -0.77
COMMD9-202ENST00000355500 LRRC37A3O60309 1634 aa10.24□□□□□ -0.77
COMMD9-202ENST00000355500 LMOD3Q0VAK6 560 aa10.24□□□□□ -0.77
COMMD9-202ENST00000355500 TNS1Q9HBL0 1735 aaKnown RBP10.24□□□□□ -0.77
COMMD9-202ENST00000355500 RGL2O15211 777 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
COMMD9-202ENST00000355500 VPS72Q15906 364 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 ALDH1L2Q3SY69 923 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 CCDC82Q8N4S0 544 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 RREB1Q92766 1687 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 TTC21BQ7Z4L5 1316 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 PRR36Q9H6K5 1346 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 PARP4Q9UKK3 1724 aaKnown RBP10.23□□□□□ -0.77
COMMD9-202ENST00000355500 LMO7Q8WWI1 1683 aa10.23□□□□□ -0.77
COMMD9-202ENST00000355500 COG3Q96JB2 828 aa10.22□□□□□ -0.77
COMMD9-202ENST00000355500 TRIM35Q9UPQ4 493 aa10.22□□□□□ -0.77
COMMD9-202ENST00000355500 IL13P35225 146 aa10.22□□□□□ -0.77
COMMD9-202ENST00000355500 UNC5CLQ8IV45 518 aa10.22□□□□□ -0.77
COMMD9-202ENST00000355500 USP21Q9UK80 565 aa10.22□□□□□ -0.77
COMMD9-202ENST00000355500 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
COMMD9-202ENST00000355500 SPTY2D1Q68D10 685 aaPredicted RBP10.21□□□□□ -0.77
COMMD9-202ENST00000355500 TNNT2P45379 298 aaPredicted RBP10.2□□□□□ -0.78
COMMD9-202ENST00000355500 NFE2L2Q16236 605 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
COMMD9-202ENST00000355500 RTL1A6NKG5 1358 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 KIF16BQ96L93 1317 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 PMFBP1Q8TBY8 1022 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 RBM33Q96EV2 1170 aaKnown RBP10.2□□□□□ -0.78
COMMD9-202ENST00000355500 GJD4Q96KN9 370 aaPredicted RBP10.2□□□□□ -0.78
COMMD9-202ENST00000355500 BACH2Q9BYV9 841 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
COMMD9-202ENST00000355500 SH3BP1Q9Y3L3 701 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 N4BP2Q86UW6 1770 aaPredicted RBP10.2□□□□□ -0.78
COMMD9-202ENST00000355500 PLIN1O60240 522 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 RGS3P49796 1198 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 C20orf194Q5TEA3 1177 aa10.2□□□□□ -0.78
COMMD9-202ENST00000355500 BCL9O00512 1426 aa10.19□□□□□ -0.78
COMMD9-202ENST00000355500 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
COMMD9-202ENST00000355500 ORAI2Q96SN7 254 aa10.19□□□□□ -0.78
COMMD9-202ENST00000355500 IFT57Q9NWB7 429 aa10.19□□□□□ -0.78
COMMD9-202ENST00000355500 CPDO75976 1380 aa10.19□□□□□ -0.78
COMMD9-202ENST00000355500 KDRP35968 1356 aa10.18□□□□□ -0.78
COMMD9-202ENST00000355500 CAMTA1Q9Y6Y1 1673 aa10.18□□□□□ -0.78
COMMD9-202ENST00000355500 ARHGAP45Q92619 1136 aa10.18□□□□□ -0.78
COMMD9-202ENST00000355500 SLIT3O75094 1523 aa10.18□□□□□ -0.78
COMMD9-202ENST00000355500 ECM2O94769 699 aaPredicted RBP10.18□□□□□ -0.78
COMMD9-202ENST00000355500 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
COMMD9-202ENST00000355500 PHF8Q9UPP1 1060 aa10.18□□□□□ -0.78
COMMD9-202ENST00000355500 BCAR3O75815 825 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 ANP32AP39687 249 aaKnown RBP10.17□□□□□ -0.78
COMMD9-202ENST00000355500 ZKSCAN2Q63HK3 967 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 ACEP12821 1306 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 PLEKHG2Q9H7P9 1386 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 APPP05067 770 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 GNAI1P63096 354 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 C8orf37Q96NL8 207 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 FLT4P35916 1363 aa10.17□□□□□ -0.78
COMMD9-202ENST00000355500 U2SURPO15042 1029 aaKnown RBP10.16□□□□□ -0.78
COMMD9-202ENST00000355500 RIPK4P57078 832 aa10.16□□□□□ -0.78
COMMD9-202ENST00000355500 IRX3P78415 501 aaPredicted RBP10.16□□□□□ -0.78
COMMD9-202ENST00000355500 MAPK8IP2Q13387 824 aaPredicted RBP10.16□□□□□ -0.78
COMMD9-202ENST00000355500 NME9Q86XW9 330 aa10.16□□□□□ -0.78
COMMD9-202ENST00000355500 IPO8O15397 1037 aaKnown RBP10.16□□□□□ -0.78
COMMD9-202ENST00000355500 PDE4AP27815 886 aa10.16□□□□□ -0.78
COMMD9-202ENST00000355500 HSP90AA2PQ14568 343 aaPredicted RBP10.16□□□□□ -0.78
COMMD9-202ENST00000355500 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
COMMD9-202ENST00000355500 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
COMMD9-202ENST00000355500 SOS1Q07889 1333 aaPredicted RBP10.16□□□□□ -0.78
COMMD9-202ENST00000355500 KIAA0232Q92628 1395 aa10.16□□□□□ -0.78
COMMD9-202ENST00000355500 MVPQ14764 893 aaKnown RBP10.15□□□□□ -0.78
COMMD9-202ENST00000355500 NFAT5O94916 1531 aa10.15□□□□□ -0.79
COMMD9-202ENST00000355500 PRKAR2BP31323 418 aa10.14□□□□□ -0.79
COMMD9-202ENST00000355500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.14□□□□□ -0.79
COMMD9-202ENST00000355500 IPO9Q96P70 1041 aaKnown RBP10.14□□□□□ -0.79
COMMD9-202ENST00000355500 MPNDQ8N594 471 aa10.14□□□□□ -0.79
COMMD9-202ENST00000355500 DDX19BQ9UMR2 479 aa10.14□□□□□ -0.79
COMMD9-202ENST00000355500 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
COMMD9-202ENST00000355500 LTN1O94822 1766 aa10.14□□□□□ -0.79
COMMD9-202ENST00000355500 COL18A1P39060 1754 aa10.14□□□□□ -0.79
COMMD9-202ENST00000355500 QSER1Q2KHR3 1735 aa10.14□□□□□ -0.79
COMMD9-202ENST00000355500 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 HTATSF1O43719 755 aaKnown RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 HDAC1Q13547 482 aaPredicted RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 NUTM2AQ8IVF1 878 aaPredicted RBP10.13□□□□□ -0.79
COMMD9-202ENST00000355500 DDRGK1Q96HY6 314 aa10.13□□□□□ -0.79
COMMD9-202ENST00000355500 FAM208AQ9UK61 1670 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms