RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 AKAP12Q02952 1782 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 CPSF1Q10570 1443 aaKnown RBP11.45□□□□□ -0.58
SMG6-202ENST00000354901 MON2Q7Z3U7 1717 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 XRN1Q8IZH2 1706 aaKnown RBP11.45□□□□□ -0.58
SMG6-202ENST00000354901 CDC45O75419 566 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 CEBPAP49715 358 aaPredicted RBP11.45□□□□□ -0.58
SMG6-202ENST00000354901 BRPF1P55201 1214 aaPredicted RBP11.45□□□□□ -0.58
SMG6-202ENST00000354901 C17orf53Q8N3J3 647 aaPredicted RBP11.45□□□□□ -0.58
SMG6-202ENST00000354901 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
SMG6-202ENST00000354901 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
SMG6-202ENST00000354901 ITSN1Q15811 1721 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 TOPAZ1Q8N9V7 1692 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
SMG6-202ENST00000354901 ATP2B3Q16720 1220 aa11.44□□□□□ -0.58
SMG6-202ENST00000354901 ISY1Q9ULR0 285 aaKnown RBP11.44□□□□□ -0.58
SMG6-202ENST00000354901 SETD1BQ9UPS6 1966 aaKnown RBP11.44□□□□□ -0.58
SMG6-202ENST00000354901 TTC21BQ7Z4L5 1316 aa11.44□□□□□ -0.58
SMG6-202ENST00000354901 LTKP29376 864 aa11.44□□□□□ -0.58
SMG6-202ENST00000354901 GAS2L2Q8NHY3 880 aa11.44□□□□□ -0.58
SMG6-202ENST00000354901 ZBTB9Q96C00 473 aa11.44□□□□□ -0.58
SMG6-202ENST00000354901 ROBO2Q9HCK4 1378 aa11.43□□□□□ -0.58
SMG6-202ENST00000354901 K7ELQ4 463 aaPredicted RBP11.43□□□□□ -0.58
SMG6-202ENST00000354901 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
SMG6-202ENST00000354901 TSHZ3Q63HK5 1081 aa11.43□□□□□ -0.58
SMG6-202ENST00000354901 G2E3Q7L622 706 aa11.43□□□□□ -0.58
SMG6-202ENST00000354901 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
SMG6-202ENST00000354901 RBSNQ9H1K0 784 aa11.43□□□□□ -0.58
SMG6-202ENST00000354901 CDK12Q9NYV4 1490 aaPredicted RBP11.43□□□□□ -0.58
SMG6-202ENST00000354901 KCNJ4P48050 445 aa11.43□□□□□ -0.58
SMG6-202ENST00000354901 UTP14CQ5TAP6 766 aaKnown RBP11.43□□□□□ -0.58
SMG6-202ENST00000354901 PPP1R9BQ96SB3 815 aa11.43□□□□□ -0.58
SMG6-202ENST00000354901 FOXD4L6Q3SYB3 417 aaPredicted RBP11.42□□□□□ -0.58
SMG6-202ENST00000354901 FOXD4L3Q6VB84 417 aaPredicted RBP11.42□□□□□ -0.58
SMG6-202ENST00000354901 RTF1Q92541 710 aaKnown RBP11.42□□□□□ -0.58
SMG6-202ENST00000354901 SNX21Q969T3 373 aa11.42□□□□□ -0.58
SMG6-202ENST00000354901 TSPYL4Q9UJ04 414 aa11.42□□□□□ -0.58
SMG6-202ENST00000354901 CSPP1Q1MSJ5 1256 aa11.42□□□□□ -0.58
SMG6-202ENST00000354901 DCTPP1Q9H773 170 aa11.42□□□□□ -0.58
SMG6-202ENST00000354901 MSH6P52701 1360 aa11.42□□□□□ -0.58
SMG6-202ENST00000354901 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.42□□□□□ -0.58
SMG6-202ENST00000354901 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 NGDNQ8NEJ9 315 aaKnown RBP11.41□□□□□ -0.58
SMG6-202ENST00000354901 CHAMP1Q96JM3 812 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 AMPHP49418 695 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 CEP85Q6P2H3 762 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 C14orf37Q86TY3 774 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 NOL7Q9UMY1 257 aaKnown RBP11.41□□□□□ -0.58
SMG6-202ENST00000354901 ZKSCAN5Q9Y2L8 839 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 CHL1O00533 1208 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 U2AF2P26368 475 aaKnown RBP eCLIP11.41□□□□□ -0.589e-7■■■□□ 15.9
SMG6-202ENST00000354901 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
SMG6-202ENST00000354901 TTC22Q5TAA0 569 aa11.41□□□□□ -0.58
SMG6-202ENST00000354901 DLG5Q8TDM6 1919 aa11.4□□□□□ -0.58
SMG6-202ENST00000354901 ANKRD44Q8N8A2 993 aa11.4□□□□□ -0.58
SMG6-202ENST00000354901 EXOC6BQ9Y2D4 811 aa11.4□□□□□ -0.58
SMG6-202ENST00000354901 PTPRUQ92729 1446 aa11.4□□□□□ -0.58
SMG6-202ENST00000354901 SDSP20132 328 aa11.4□□□□□ -0.58
SMG6-202ENST00000354901 MTHFSDQ2M296 383 aaKnown RBP11.4□□□□□ -0.58
SMG6-202ENST00000354901 MAP3K19Q56UN5 1328 aa11.4□□□□□ -0.59
SMG6-202ENST00000354901 ERICH4A6NGS2 130 aa11.4□□□□□ -0.59
SMG6-202ENST00000354901 INTS3Q68E01 1043 aaKnown RBP11.4□□□□□ -0.59
SMG6-202ENST00000354901 LETM1O95202 739 aaPredicted RBP11.39□□□□□ -0.59
SMG6-202ENST00000354901 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
SMG6-202ENST00000354901 NOL8Q76FK4 1167 aaKnown RBP11.39□□□□□ -0.59
SMG6-202ENST00000354901 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
SMG6-202ENST00000354901 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
SMG6-202ENST00000354901 SYCE3A1L190 88 aa11.39□□□□□ -0.59
SMG6-202ENST00000354901 GTPBP4Q9BZE4 634 aaKnown RBP11.39□□□□□ -0.59
SMG6-202ENST00000354901 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 AK9Q5TCS8 1911 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
SMG6-202ENST00000354901 KIF20AO95235 890 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 DDIT3P35638 169 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 ANKLE2Q86XL3 938 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
SMG6-202ENST00000354901 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
SMG6-202ENST00000354901 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
SMG6-202ENST00000354901 TERF1P54274 439 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 KIAA2012Q0VF49 1180 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 ZSCAN23Q3MJ62 389 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
SMG6-202ENST00000354901 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
SMG6-202ENST00000354901 PLEKHG3A1L390 1219 aa11.37□□□□□ -0.59
SMG6-202ENST00000354901 FKBP5Q13451 457 aaPredicted RBP11.37□□□□□ -0.59
SMG6-202ENST00000354901 PKP1Q13835 747 aa11.37□□□□□ -0.59
SMG6-202ENST00000354901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.37□□□□□ -0.59
SMG6-202ENST00000354901 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
SMG6-202ENST00000354901 RTL1A6NKG5 1358 aa11.37□□□□□ -0.59
SMG6-202ENST00000354901 NLRP6P59044 892 aa11.37□□□□□ -0.59
SMG6-202ENST00000354901 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
SMG6-202ENST00000354901 USP26Q9BXU7 913 aa11.37□□□□□ -0.59
SMG6-202ENST00000354901 ZNF500O60304 480 aaPredicted RBP11.36□□□□□ -0.59
SMG6-202ENST00000354901 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
SMG6-202ENST00000354901 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
SMG6-202ENST00000354901 EYA1Q99502 592 aa11.36□□□□□ -0.59
SMG6-202ENST00000354901 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
SMG6-202ENST00000354901 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
SMG6-202ENST00000354901 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
SMG6-202ENST00000354901 CCDC39Q9UFE4 941 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms