RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 KIF1BPQ96EK5 621 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 UPF3BQ9BZI7 483 aaKnown RBP9.39□□□□□ -0.91
CD46-203ENST00000354848 API5Q9BZZ5 524 aaKnown RBP9.39□□□□□ -0.91
CD46-203ENST00000354848 ZNF215Q9UL58 517 aaPredicted RBP9.39□□□□□ -0.91
CD46-203ENST00000354848 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.39□□□□□ -0.91
CD46-203ENST00000354848 SETBP1Q9Y6X0 1596 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 TUBGCP6Q96RT7 1819 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 MCCP23508 829 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 ZNF592Q92610 1267 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 KIF24Q5T7B8 1368 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 NOL10Q9BSC4 688 aaKnown RBP9.39□□□□□ -0.91
CD46-203ENST00000354848 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 NRXN1Q9ULB1 1477 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 MROH2AA6NES4 1674 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 RAD51AP2Q09MP3 1159 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 CEP85Q6P2H3 762 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
CD46-203ENST00000354848 DRC7Q8IY82 874 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 RTF1Q92541 710 aaKnown RBP9.38□□□□□ -0.91
CD46-203ENST00000354848 LRRC7Q96NW7 1537 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 ELF2Q15723 593 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 AEBP1Q8IUX7 1158 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 CHMP7Q8WUX9 453 aaPredicted RBP9.38□□□□□ -0.91
CD46-203ENST00000354848 THUMPD2Q9BTF0 503 aaKnown RBP9.38□□□□□ -0.91
CD46-203ENST00000354848 ZNF446Q9NWS9 450 aa9.38□□□□□ -0.91
CD46-203ENST00000354848 PLCH2O75038 1416 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 PDE1AP54750 535 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 DEPDC5O75140 1603 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 STX6O43752 255 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
CD46-203ENST00000354848 F13A1P00488 732 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 TWISTNBQ3B726 338 aaPredicted RBP9.37□□□□□ -0.91
CD46-203ENST00000354848 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 ANO2Q9NQ90 1003 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 FAM135BQ49AJ0 1406 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 SYT1P21579 422 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 CACTINQ8WUQ7 758 aaKnown RBP9.37□□□□□ -0.91
CD46-203ENST00000354848 ERO1AQ96HE7 468 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 MRVI1Q9Y6F6 885 aa9.37□□□□□ -0.91
CD46-203ENST00000354848 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 ERBB3P21860 1342 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 PLA2G4DQ86XP0 818 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 IL17RAQ96F46 866 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 ZFP91Q96JP5 570 aaPredicted RBP9.36□□□□□ -0.91
CD46-203ENST00000354848 MBIPQ9NS73 344 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.36□□□□□ -0.91
CD46-203ENST00000354848 ANKRD26Q9UPS8 1709 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 ZNF75DP51815 510 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
CD46-203ENST00000354848 TRIM5Q9C035 493 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 ATP6V1DQ9Y5K8 247 aa9.36□□□□□ -0.91
CD46-203ENST00000354848 VWDEQ8N2E2 1590 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 USP27XA6NNY8 438 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 FCHSD2O94868 740 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 PRKAR2BP31323 418 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 GNAI1P63096 354 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 DNM1Q05193 864 aaKnown RBP9.35□□□□□ -0.91
CD46-203ENST00000354848 BMS1Q14692 1282 aaKnown RBP9.35□□□□□ -0.91
CD46-203ENST00000354848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.35□□□□□ -0.91
CD46-203ENST00000354848 TEX2Q8IWB9 1127 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 TYRO3Q06418 890 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 GTF3C6Q969F1 213 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 ZBTB9Q96C00 473 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 TULP4Q9NRJ4 1543 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 FBLN2P98095 1184 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 CCDC144BQ3MJ40 725 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 TSHZ3Q63HK5 1081 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 NYAP1Q6ZVC0 841 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 CBX8Q9HC52 389 aa9.35□□□□□ -0.91
CD46-203ENST00000354848 CCDC171Q6TFL3 1326 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
CD46-203ENST00000354848 ADGRB1O14514 1584 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 ZNF853P0CG23 659 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
CD46-203ENST00000354848 PTPN14Q15678 1187 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 TMEM132EQ6IEE7 984 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 SSH2Q76I76 1423 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 CLIP2Q9UDT6 1046 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 A0A1W2PP64 1363 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 SLU7O95391 586 aaKnown RBP9.34□□□□□ -0.91
CD46-203ENST00000354848 CHMLP26374 656 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 CAMK4Q16566 473 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 ANO6Q4KMQ2 910 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 RAD50Q92878 1312 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 GLI2P10070 1586 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 CDC42BPGQ6DT37 1551 aa9.34□□□□□ -0.91
CD46-203ENST00000354848 NPHP1O15259 732 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 H2AFXP16104 143 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms