RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
CAPN9-202ENST00000354537 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
CAPN9-202ENST00000354537 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
CAPN9-202ENST00000354537 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
CAPN9-202ENST00000354537 SASS6Q6UVJ0 657 aa13.88□□□□□ -0.19
CAPN9-202ENST00000354537 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
CAPN9-202ENST00000354537 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
CAPN9-202ENST00000354537 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
CAPN9-202ENST00000354537 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
CAPN9-202ENST00000354537 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
CAPN9-202ENST00000354537 GNAI3P08754 354 aa13.87□□□□□ -0.19
CAPN9-202ENST00000354537 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
CAPN9-202ENST00000354537 LETM1O95202 739 aaPredicted RBP13.86□□□□□ -0.19
CAPN9-202ENST00000354537 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
CAPN9-202ENST00000354537 OVOS2A0A0J9YW53 1432 aa13.86□□□□□ -0.19
CAPN9-202ENST00000354537 OVOS2Q6IE36 1432 aa13.86□□□□□ -0.19
CAPN9-202ENST00000354537 WDR33Q9C0J8 1336 aaKnown RBP13.86□□□□□ -0.19
CAPN9-202ENST00000354537 USP31Q70CQ4 1352 aa13.85□□□□□ -0.19
CAPN9-202ENST00000354537 MX1P20591 662 aa13.85□□□□□ -0.19
CAPN9-202ENST00000354537 CHMLP26374 656 aa13.85□□□□□ -0.19
CAPN9-202ENST00000354537 ATP8B2P98198 1209 aa13.85□□□□□ -0.19
CAPN9-202ENST00000354537 HTATSF1O43719 755 aaKnown RBP13.85□□□□□ -0.19
CAPN9-202ENST00000354537 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
CAPN9-202ENST00000354537 UQCRHLA0A096LP55 91 aa13.84□□□□□ -0.19
CAPN9-202ENST00000354537 UQCRHP07919 91 aa13.84□□□□□ -0.19
CAPN9-202ENST00000354537 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
CAPN9-202ENST00000354537 XPCQ01831 940 aaPredicted RBP13.84□□□□□ -0.19
CAPN9-202ENST00000354537 KRT24Q2M2I5 525 aa13.84□□□□□ -0.19
CAPN9-202ENST00000354537 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
CAPN9-202ENST00000354537 NALCNQ8IZF0 1738 aa13.84□□□□□ -0.19
CAPN9-202ENST00000354537 MCM10Q7L590 875 aa13.84□□□□□ -0.19
CAPN9-202ENST00000354537 APBB1O00213 710 aa13.83□□□□□ -0.2
CAPN9-202ENST00000354537 KIAA2012Q0VF49 1180 aa13.83□□□□□ -0.2
CAPN9-202ENST00000354537 SENP3Q9H4L4 574 aaPredicted RBP13.83□□□□□ -0.2
CAPN9-202ENST00000354537 METP08581 1390 aa13.83□□□□□ -0.2
CAPN9-202ENST00000354537 PLEKHG3A1L390 1219 aa13.83□□□□□ -0.2
CAPN9-202ENST00000354537 PXDNLA1KZ92 1463 aa13.83□□□□□ -0.2
CAPN9-202ENST00000354537 STK31Q9BXU1 1019 aa13.82□□□□□ -0.2
CAPN9-202ENST00000354537 BABAM1Q9NWV8 329 aa13.82□□□□□ -0.2
CAPN9-202ENST00000354537 N4BP2Q86UW6 1770 aaPredicted RBP13.81□□□□□ -0.2
CAPN9-202ENST00000354537 HSPA4P34932 840 aa13.81□□□□□ -0.2
CAPN9-202ENST00000354537 PRIMPOLQ96LW4 560 aa13.81□□□□□ -0.2
CAPN9-202ENST00000354537 RTF1Q92541 710 aaKnown RBP13.81□□□□□ -0.2
CAPN9-202ENST00000354537 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
CAPN9-202ENST00000354537 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
CAPN9-202ENST00000354537 KDRP35968 1356 aa13.81□□□□□ -0.2
CAPN9-202ENST00000354537 TOPAZ1Q8N9V7 1692 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 RAB11FIP3O75154 756 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 CCDC183Q5T5S1 534 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 G2E3Q7L622 706 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
CAPN9-202ENST00000354537 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
CAPN9-202ENST00000354537 CCDC30Q5VVM6 783 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 EXOC6BQ9Y2D4 811 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 PEAK1Q9H792 1746 aa13.8□□□□□ -0.2
CAPN9-202ENST00000354537 RPAP1Q9BWH6 1393 aaPredicted RBP13.79□□□□□ -0.2
CAPN9-202ENST00000354537 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
CAPN9-202ENST00000354537 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
CAPN9-202ENST00000354537 FAM13BQ9NYF5 915 aa13.79□□□□□ -0.2
CAPN9-202ENST00000354537 XRN1Q8IZH2 1706 aaKnown RBP13.79□□□□□ -0.2
CAPN9-202ENST00000354537 RBM10P98175 930 aaKnown RBP13.79□□□□□ -0.2
CAPN9-202ENST00000354537 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
CAPN9-202ENST00000354537 ATP6V1DQ9Y5K8 247 aa13.79□□□□□ -0.2
CAPN9-202ENST00000354537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
CAPN9-202ENST00000354537 USP6P35125 1406 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 MYRIPQ8NFW9 859 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 LRRC37A3O60309 1634 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 TRIM6-TRIM34B2RNG4 842 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 F6X3S4 739 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 TPM3P06753 285 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 GTF2F1P35269 517 aaKnown RBP eCLIP13.78□□□□□ -0.2
CAPN9-202ENST00000354537 FLIIQ13045 1269 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 RNF214Q8ND24 703 aa13.78□□□□□ -0.2
CAPN9-202ENST00000354537 TTC21AQ8NDW8 1320 aa13.77□□□□□ -0.2
CAPN9-202ENST00000354537 PDIA4P13667 645 aaKnown RBP13.77□□□□□ -0.21
CAPN9-202ENST00000354537 UBE2HP62256 183 aa13.77□□□□□ -0.21
CAPN9-202ENST00000354537 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
CAPN9-202ENST00000354537 SSH3Q8TE77 659 aa13.77□□□□□ -0.21
CAPN9-202ENST00000354537 RILPL2Q969X0 211 aa13.77□□□□□ -0.21
CAPN9-202ENST00000354537 CHAMP1Q96JM3 812 aa13.77□□□□□ -0.21
CAPN9-202ENST00000354537 CACNA1FO60840 1977 aa13.77□□□□□ -0.21
CAPN9-202ENST00000354537 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
CAPN9-202ENST00000354537 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
CAPN9-202ENST00000354537 FOXD4L5Q5VV16 416 aaPredicted RBP13.76□□□□□ -0.21
CAPN9-202ENST00000354537 SMAP1Q8IYB5 467 aaPredicted RBP13.76□□□□□ -0.21
CAPN9-202ENST00000354537 FOXD4L4Q8WXT5 416 aaPredicted RBP13.76□□□□□ -0.21
CAPN9-202ENST00000354537 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.76□□□□□ -0.21
CAPN9-202ENST00000354537 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
CAPN9-202ENST00000354537 NCKAP5LQ9HCH0 1330 aa13.76□□□□□ -0.21
CAPN9-202ENST00000354537 ZSCAN22P10073 491 aaPredicted RBP13.76□□□□□ -0.21
CAPN9-202ENST00000354537 SPTLC3Q9NUV7 552 aa13.76□□□□□ -0.21
CAPN9-202ENST00000354537 ACEP12821 1306 aa13.76□□□□□ -0.21
CAPN9-202ENST00000354537 MAP3K19Q56UN5 1328 aa13.76□□□□□ -0.21
CAPN9-202ENST00000354537 RAD50Q92878 1312 aa13.76□□□□□ -0.21
CAPN9-202ENST00000354537 PNMA6EA0A0J9YXQ4 647 aa13.75□□□□□ -0.21
CAPN9-202ENST00000354537 GADD45BO75293 160 aaPredicted RBP13.75□□□□□ -0.21
CAPN9-202ENST00000354537 TTC14Q96N46 770 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms