RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 PI4KAP2A4QPH2 592 aa22.4■■□□□ 1.18
APP-203ENST00000354192 PI4KAP1Q8N8J0 262 aa22.4■■□□□ 1.18
APP-203ENST00000354192 RGPD8O14715 1765 aaPredicted RBP22.39■■□□□ 1.18
APP-203ENST00000354192 CHRNA2Q15822 529 aa22.39■■□□□ 1.18
APP-203ENST00000354192 NCLP19338 710 aaKnown RBP22.39■■□□□ 1.17
APP-203ENST00000354192 MCM4P33991 863 aa22.39■■□□□ 1.17
APP-203ENST00000354192 SLC39A6Q13433 755 aa22.38■■□□□ 1.17
APP-203ENST00000354192 MAP3K5Q99683 1374 aa22.37■■□□□ 1.17
APP-203ENST00000354192 ANO2Q9NQ90 1003 aa22.37■■□□□ 1.17
APP-203ENST00000354192 DIP2AQ14689 1571 aa22.37■■□□□ 1.17
APP-203ENST00000354192 ANKRD24Q8TF21 1146 aa22.36■■□□□ 1.17
APP-203ENST00000354192 IP6K1Q92551 441 aa22.36■■□□□ 1.17
APP-203ENST00000354192 C3P01024 1663 aa22.36■■□□□ 1.17
APP-203ENST00000354192 JARID2Q92833 1246 aaPredicted RBP22.36■■□□□ 1.17
APP-203ENST00000354192 SRGAP3O43295 1099 aa22.36■■□□□ 1.17
APP-203ENST00000354192 KRT28Q7Z3Y7 464 aa22.36■■□□□ 1.17
APP-203ENST00000354192 LRRCC1Q9C099 1032 aa22.36■■□□□ 1.17
APP-203ENST00000354192 DTNBO60941 627 aa22.35■■□□□ 1.17
APP-203ENST00000354192 AXIN2Q9Y2T1 843 aa22.35■■□□□ 1.17
APP-203ENST00000354192 PEAK1Q9H792 1746 aa22.35■■□□□ 1.17
APP-203ENST00000354192 KIAA0232Q92628 1395 aa22.35■■□□□ 1.17
APP-203ENST00000354192 NBPF7P0C2Y1 421 aaPredicted RBP22.35■■□□□ 1.17
APP-203ENST00000354192 MYL6BP14649 208 aa22.35■■□□□ 1.17
APP-203ENST00000354192 GNAI3P08754 354 aa22.34■■□□□ 1.17
APP-203ENST00000354192 RBM25P49756 843 aaKnown RBP22.34■■□□□ 1.17
APP-203ENST00000354192 HSPA2P54652 639 aa22.34■■□□□ 1.17
APP-203ENST00000354192 MON2Q7Z3U7 1717 aa22.34■■□□□ 1.17
APP-203ENST00000354192 TRAK2O60296 914 aa22.34■■□□□ 1.17
APP-203ENST00000354192 PDE1AP54750 535 aa22.34■■□□□ 1.17
APP-203ENST00000354192 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
APP-203ENST00000354192 KIF2CQ99661 725 aa22.34■■□□□ 1.17
APP-203ENST00000354192 SRCIN1Q9C0H9 1055 aa22.34■■□□□ 1.17
APP-203ENST00000354192 K7ELQ4 463 aaPredicted RBP22.33■■□□□ 1.17
APP-203ENST00000354192 PPP1R42Q7Z4L9 355 aa22.33■■□□□ 1.16
APP-203ENST00000354192 C9orf78Q9NZ63 289 aaPredicted RBP22.33■■□□□ 1.16
APP-203ENST00000354192 PLEKHO1Q53GL0 409 aaPredicted RBP22.32■■□□□ 1.16
APP-203ENST00000354192 TNPO1Q92973 898 aaKnown RBP22.32■■□□□ 1.16
APP-203ENST00000354192 SSH2Q76I76 1423 aa22.32■■□□□ 1.16
APP-203ENST00000354192 SSFA2P28290 1259 aa22.32■■□□□ 1.16
APP-203ENST00000354192 USP44Q9H0E7 712 aa22.32■■□□□ 1.16
APP-203ENST00000354192 RGS12O14924 1447 aa22.31■■□□□ 1.16
APP-203ENST00000354192 PROSER3Q2NL68 480 aa22.31■■□□□ 1.16
APP-203ENST00000354192 CHAMP1Q96JM3 812 aa22.31■■□□□ 1.16
APP-203ENST00000354192 CWF19L2Q2TBE0 894 aaKnown RBP22.31■■□□□ 1.16
APP-203ENST00000354192 LARP6Q9BRS8 491 aaKnown RBP22.31■■□□□ 1.16
APP-203ENST00000354192 MX1P20591 662 aa22.3■■□□□ 1.16
APP-203ENST00000354192 ATP10DQ9P241 1426 aa22.3■■□□□ 1.16
APP-203ENST00000354192 UPF3BQ9BZI7 483 aaKnown RBP22.3■■□□□ 1.16
APP-203ENST00000354192 NEK4P51957 841 aa22.29■■□□□ 1.16
APP-203ENST00000354192 KCNH5Q8NCM2 988 aa22.29■■□□□ 1.16
APP-203ENST00000354192 ATF3P18847 181 aa22.29■■□□□ 1.16
APP-203ENST00000354192 UNC5CLQ8IV45 518 aa22.29■■□□□ 1.16
APP-203ENST00000354192 SIL1Q9H173 461 aa22.29■■□□□ 1.16
APP-203ENST00000354192 PA2G4Q9UQ80 394 aaKnown RBP22.28■■□□□ 1.16
APP-203ENST00000354192 ZNF330Q9Y3S2 320 aaPredicted RBP22.28■■□□□ 1.16
APP-203ENST00000354192 KDRP35968 1356 aa22.28■■□□□ 1.16
APP-203ENST00000354192 EIF4A1P60842 406 aaKnown RBP22.28■■□□□ 1.16
APP-203ENST00000354192 RAPGEF4Q8WZA2 1011 aa22.28■■□□□ 1.16
APP-203ENST00000354192 USP26Q9BXU7 913 aa22.28■■□□□ 1.16
APP-203ENST00000354192 AKAP12Q02952 1782 aa22.27■■□□□ 1.16
APP-203ENST00000354192 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
APP-203ENST00000354192 DNAAF4Q8WXU2 420 aa22.26■■□□□ 1.15
APP-203ENST00000354192 ZGPATQ8N5A5 531 aaKnown RBP22.26■■□□□ 1.15
APP-203ENST00000354192 MAP3K2Q9Y2U5 619 aa22.26■■□□□ 1.15
APP-203ENST00000354192 ERC2O15083 957 aa22.26■■□□□ 1.15
APP-203ENST00000354192 ATP8B2P98198 1209 aa22.26■■□□□ 1.15
APP-203ENST00000354192 PKP1Q13835 747 aa22.26■■□□□ 1.15
APP-203ENST00000354192 REC8O95072 547 aa22.25■■□□□ 1.15
APP-203ENST00000354192 PANK2Q9BZ23 570 aa22.25■■□□□ 1.15
APP-203ENST00000354192 FER1L4A9Z1Z3 1794 aa22.24■■□□□ 1.15
APP-203ENST00000354192 GOLGA6L3A6NEY3 463 aa22.24■■□□□ 1.15
APP-203ENST00000354192 A0A0G2JS52 829 aa22.23■■□□□ 1.15
APP-203ENST00000354192 HTATSF1O43719 755 aaKnown RBP22.23■■□□□ 1.15
APP-203ENST00000354192 ARHGAP23Q9P227 1491 aa22.23■■□□□ 1.15
APP-203ENST00000354192 MCTP1Q6DN14 999 aa22.23■■□□□ 1.15
APP-203ENST00000354192 NFATC2IPQ8NCF5 419 aa22.23■■□□□ 1.15
APP-203ENST00000354192 GBP4Q96PP9 640 aa22.23■■□□□ 1.15
APP-203ENST00000354192 ST18O60284 1047 aa22.22■■□□□ 1.15
APP-203ENST00000354192 KNDC1Q76NI1 1749 aa22.22■■□□□ 1.15
APP-203ENST00000354192 RNMTO43148 476 aaKnown RBP22.22■■□□□ 1.15
APP-203ENST00000354192 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.22■■□□□ 1.15
APP-203ENST00000354192 RABEP1Q15276 862 aa22.21■■□□□ 1.15
APP-203ENST00000354192 AKAP4Q5JQC9 854 aa22.21■■□□□ 1.15
APP-203ENST00000354192 RIC3Q7Z5B4 369 aa22.21■■□□□ 1.15
APP-203ENST00000354192 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
APP-203ENST00000354192 KLHDC4Q8TBB5 520 aa22.21■■□□□ 1.15
APP-203ENST00000354192 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
APP-203ENST00000354192 SLIT1O75093 1534 aa22.21■■□□□ 1.15
APP-203ENST00000354192 CWC27Q6UX04 472 aaKnown RBP22.2■■□□□ 1.14
APP-203ENST00000354192 SNX21Q969T3 373 aa22.2■■□□□ 1.14
APP-203ENST00000354192 PALD1Q9ULE6 856 aa22.2■■□□□ 1.14
APP-203ENST00000354192 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.14
APP-203ENST00000354192 RHPN1Q8TCX5 695 aa22.19■■□□□ 1.14
APP-203ENST00000354192 SPG7Q9UQ90 795 aa22.19■■□□□ 1.14
APP-203ENST00000354192 CHMP3Q9Y3E7 222 aa22.19■■□□□ 1.14
APP-203ENST00000354192 DDX49Q9Y6V7 483 aaKnown RBP22.19■■□□□ 1.14
APP-203ENST00000354192 VIRMAQ69YN4 1812 aaKnown RBP22.19■■□□□ 1.14
APP-203ENST00000354192 PIK3C2AO00443 1686 aa22.18■■□□□ 1.14
APP-203ENST00000354192 DBF4Q9UBU7 674 aaPredicted RBP22.17■■□□□ 1.14
APP-203ENST00000354192 DDX11L8A8MPP1 907 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms