RNA–Protein interactions for RNA: ENST00000350669.5

LDHB-201, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHB, Length 1,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-201ENST00000350669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.92□□□□□ -0.5
LDHB-201ENST00000350669 LTV1Q96GA3 475 aaPredicted RBP11.92□□□□□ -0.5
LDHB-201ENST00000350669 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
LDHB-201ENST00000350669 HSPA1AP0DMV8 641 aaKnown RBP11.91□□□□□ -0.5
LDHB-201ENST00000350669 HSPA1BP0DMV9 641 aaKnown RBP11.91□□□□□ -0.5
LDHB-201ENST00000350669 PYGBP11216 843 aa11.91□□□□□ -0.5
LDHB-201ENST00000350669 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
LDHB-201ENST00000350669 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
LDHB-201ENST00000350669 KTN1Q86UP2 1357 aaKnown RBP11.91□□□□□ -0.5
LDHB-201ENST00000350669 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
LDHB-201ENST00000350669 NME9Q86XW9 330 aa11.9□□□□□ -0.5
LDHB-201ENST00000350669 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
LDHB-201ENST00000350669 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
LDHB-201ENST00000350669 BCS1LQ9Y276 419 aa11.89□□□□□ -0.51
LDHB-201ENST00000350669 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
LDHB-201ENST00000350669 FSTL1Q12841 308 aa11.88□□□□□ -0.51
LDHB-201ENST00000350669 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
LDHB-201ENST00000350669 AK7Q96M32 723 aa11.88□□□□□ -0.51
LDHB-201ENST00000350669 C5P01031 1676 aa11.88□□□□□ -0.51
LDHB-201ENST00000350669 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
LDHB-201ENST00000350669 PALLDQ8WX93 1383 aa11.88□□□□□ -0.51
LDHB-201ENST00000350669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.87□□□□□ -0.51
LDHB-201ENST00000350669 USP31Q70CQ4 1352 aa11.87□□□□□ -0.51
LDHB-201ENST00000350669 MEGF6O75095 1541 aa11.87□□□□□ -0.51
LDHB-201ENST00000350669 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
LDHB-201ENST00000350669 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
LDHB-201ENST00000350669 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
LDHB-201ENST00000350669 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
LDHB-201ENST00000350669 C9orf131Q5VYM1 1079 aa11.86□□□□□ -0.51
LDHB-201ENST00000350669 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
LDHB-201ENST00000350669 TOGARAM1Q9Y4F4 1720 aa11.85□□□□□ -0.51
LDHB-201ENST00000350669 CD163L1Q9NR16 1453 aa11.84□□□□□ -0.51
LDHB-201ENST00000350669 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
LDHB-201ENST00000350669 MMP10P09238 476 aa11.84□□□□□ -0.51
LDHB-201ENST00000350669 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
LDHB-201ENST00000350669 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
LDHB-201ENST00000350669 SBNO2Q9Y2G9 1366 aa11.83□□□□□ -0.52
LDHB-201ENST00000350669 FCHSD2O94868 740 aa11.83□□□□□ -0.52
LDHB-201ENST00000350669 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
LDHB-201ENST00000350669 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
LDHB-201ENST00000350669 IP6K1Q92551 441 aa11.83□□□□□ -0.52
LDHB-201ENST00000350669 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
LDHB-201ENST00000350669 PLEKHG2Q9H7P9 1386 aa11.82□□□□□ -0.52
LDHB-201ENST00000350669 DPEP1P16444 411 aa11.82□□□□□ -0.52
LDHB-201ENST00000350669 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
LDHB-201ENST00000350669 FAM208AQ9UK61 1670 aaKnown RBP11.81□□□□□ -0.52
LDHB-201ENST00000350669 SSFA2P28290 1259 aa11.81□□□□□ -0.52
LDHB-201ENST00000350669 RNF181Q9P0P0 153 aa11.81□□□□□ -0.52
LDHB-201ENST00000350669 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
LDHB-201ENST00000350669 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 NSD3Q9BZ95 1437 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 GNPATO15228 680 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 TGFB2P61812 414 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 LINC00116Q8NCU8 138 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 C10orf71Q711Q0 1435 aa11.8□□□□□ -0.52
LDHB-201ENST00000350669 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
LDHB-201ENST00000350669 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
LDHB-201ENST00000350669 FBLN1P23142 703 aa11.79□□□□□ -0.52
LDHB-201ENST00000350669 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
LDHB-201ENST00000350669 CARD11Q9BXL7 1154 aa11.79□□□□□ -0.52
LDHB-201ENST00000350669 HOXC9P31274 260 aa11.78□□□□□ -0.52
LDHB-201ENST00000350669 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
LDHB-201ENST00000350669 UBR3Q6ZT12 1888 aa11.78□□□□□ -0.52
LDHB-201ENST00000350669 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
LDHB-201ENST00000350669 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
LDHB-201ENST00000350669 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
LDHB-201ENST00000350669 AMPHP49418 695 aa11.77□□□□□ -0.53
LDHB-201ENST00000350669 NBPF6Q5VWK0 638 aa11.77□□□□□ -0.53
LDHB-201ENST00000350669 RAPGEF4Q8WZA2 1011 aa11.77□□□□□ -0.53
LDHB-201ENST00000350669 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
LDHB-201ENST00000350669 NBPF4Q96M43 638 aa11.77□□□□□ -0.53
LDHB-201ENST00000350669 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
LDHB-201ENST00000350669 EDC4Q6P2E9 1401 aaKnown RBP11.76□□□□□ -0.53
LDHB-201ENST00000350669 A0A1W2PP64 1363 aa11.76□□□□□ -0.53
LDHB-201ENST00000350669 PCDH11XQ9BZA7 1347 aa11.76□□□□□ -0.53
LDHB-201ENST00000350669 PCDH11YQ9BZA8 1340 aa11.76□□□□□ -0.53
LDHB-201ENST00000350669 HDGFL2Q7Z4V5 671 aaPredicted RBP11.76□□□□□ -0.53
LDHB-201ENST00000350669 SLC12A5Q9H2X9 1139 aa11.76□□□□□ -0.53
LDHB-201ENST00000350669 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
LDHB-201ENST00000350669 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 FOXN1O15353 648 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
LDHB-201ENST00000350669 SIK1P57059 783 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 ITPK1Q13572 414 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
LDHB-201ENST00000350669 PIGBQ92521 554 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
LDHB-201ENST00000350669 MKRN1Q9UHC7 482 aaKnown RBP11.75□□□□□ -0.53
LDHB-201ENST00000350669 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
LDHB-201ENST00000350669 CYP27B1O15528 508 aa11.74□□□□□ -0.53
LDHB-201ENST00000350669 KCNA3P22001 575 aa11.74□□□□□ -0.53
LDHB-201ENST00000350669 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
LDHB-201ENST00000350669 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
LDHB-201ENST00000350669 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
LDHB-201ENST00000350669 CGNL1Q0VF96 1302 aa11.73□□□□□ -0.53
LDHB-201ENST00000350669 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms