RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 MEIS3Q99687 375 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 CEP126Q9P2H0 1117 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 AKAP4Q5JQC9 854 aa23.29■■□□□ 1.32
RNF38-202ENST00000350199 FOSBP53539 338 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 HSPA2P54652 639 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 TRIM35Q9UPQ4 493 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
RNF38-202ENST00000350199 KIF1BO60333 1816 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 ABCC3O15438 1527 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 ERICH2A1L162 156 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 TRAK2O60296 914 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 GLRX3O76003 335 aaKnown RBP23.28■■□□□ 1.32
RNF38-202ENST00000350199 ADAMTS2O95450 1211 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 CYP46A1Q9Y6A2 500 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 UNC13BO14795 1591 aa23.28■■□□□ 1.32
RNF38-202ENST00000350199 BMP2KLQ5H9B9 411 aa23.27■■□□□ 1.32
RNF38-202ENST00000350199 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
RNF38-202ENST00000350199 CLASP1Q7Z460 1538 aa23.27■■□□□ 1.32
RNF38-202ENST00000350199 NUCB1Q02818 461 aa23.27■■□□□ 1.32
RNF38-202ENST00000350199 BICD2Q8TD16 824 aa23.27■■□□□ 1.32
RNF38-202ENST00000350199 CHPF2Q9P2E5 772 aa23.26■■□□□ 1.31
RNF38-202ENST00000350199 TSPOAP1O95153 1857 aa23.26■■□□□ 1.31
RNF38-202ENST00000350199 PLEKHG3A1L390 1219 aa23.26■■□□□ 1.31
RNF38-202ENST00000350199 CABLES1Q8TDN4 633 aa23.26■■□□□ 1.31
RNF38-202ENST00000350199 IP6K1Q92551 441 aa23.26■■□□□ 1.31
RNF38-202ENST00000350199 METP08581 1390 aa23.26■■□□□ 1.31
RNF38-202ENST00000350199 CWC22Q9HCG8 908 aaKnown RBP23.25■■□□□ 1.31
RNF38-202ENST00000350199 SYNMO15061 1565 aa23.25■■□□□ 1.31
RNF38-202ENST00000350199 SBNO1A3KN83 1393 aa23.25■■□□□ 1.31
RNF38-202ENST00000350199 MPHOSPH8Q99549 860 aa23.25■■□□□ 1.31
RNF38-202ENST00000350199 FKBP4Q02790 459 aaKnown RBP eCLIP23.24■■□□□ 1.31
RNF38-202ENST00000350199 MAP3K5Q99683 1374 aa23.24■■□□□ 1.31
RNF38-202ENST00000350199 PPP1R42Q7Z4L9 355 aa23.24■■□□□ 1.31
RNF38-202ENST00000350199 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.23■■□□□ 1.31
RNF38-202ENST00000350199 SNRPA1P09661 255 aaKnown RBP23.23■■□□□ 1.31
RNF38-202ENST00000350199 FBXW7Q969H0 707 aa23.23■■□□□ 1.31
RNF38-202ENST00000350199 RNF123Q5XPI4 1314 aa23.23■■□□□ 1.31
RNF38-202ENST00000350199 A0A087WZG4 1122 aa23.22■■□□□ 1.31
RNF38-202ENST00000350199 ORAI2Q96SN7 254 aa23.22■■□□□ 1.31
RNF38-202ENST00000350199 TBC1D9Q6ZT07 1266 aa23.21■■□□□ 1.31
RNF38-202ENST00000350199 ANKRD44Q8N8A2 993 aa23.21■■□□□ 1.31
RNF38-202ENST00000350199 SLC39A6Q13433 755 aa23.21■■□□□ 1.31
RNF38-202ENST00000350199 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
RNF38-202ENST00000350199 EXOC5O00471 708 aa23.21■■□□□ 1.31
RNF38-202ENST00000350199 CLTCL1P53675 1640 aa23.21■■□□□ 1.31
RNF38-202ENST00000350199 BOLA2Q9H3K6 86 aa23.2■■□□□ 1.3
RNF38-202ENST00000350199 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
RNF38-202ENST00000350199 PDCP20941 246 aa23.2■■□□□ 1.3
RNF38-202ENST00000350199 CCDC8Q9H0W5 538 aaPredicted RBP23.2■■□□□ 1.3
RNF38-202ENST00000350199 JAKMIP1Q96N16 626 aaKnown RBP23.19■■□□□ 1.3
RNF38-202ENST00000350199 BECN2A8MW95 431 aa23.19■■□□□ 1.3
RNF38-202ENST00000350199 GOLGA6L19H0YKK7 550 aa23.19■■□□□ 1.3
RNF38-202ENST00000350199 PRPF40AO75400 957 aaKnown RBP23.19■■□□□ 1.3
RNF38-202ENST00000350199 CIZ1Q9ULV3 898 aaPredicted RBP23.19■■□□□ 1.3
RNF38-202ENST00000350199 TTC22Q5TAA0 569 aa23.18■■□□□ 1.3
RNF38-202ENST00000350199 ZCRB1Q8TBF4 217 aaKnown RBP23.18■■□□□ 1.3
RNF38-202ENST00000350199 ATP5J2-PTCD1G3V325 749 aa23.18■■□□□ 1.3
RNF38-202ENST00000350199 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
RNF38-202ENST00000350199 BLOC1S2Q6QNY1 142 aa23.18■■□□□ 1.3
RNF38-202ENST00000350199 ANKRD1Q15327 319 aa23.18■■□□□ 1.3
RNF38-202ENST00000350199 GNL3LQ9NVN8 582 aaKnown RBP23.18■■□□□ 1.3
RNF38-202ENST00000350199 TSHZ3Q63HK5 1081 aa23.17■■□□□ 1.3
RNF38-202ENST00000350199 TBC1D2Q9BYX2 928 aa23.17■■□□□ 1.3
RNF38-202ENST00000350199 CAVIN1Q6NZI2 390 aaKnown RBP23.16■■□□□ 1.3
RNF38-202ENST00000350199 PDRG1Q9NUG6 133 aa23.16■■□□□ 1.3
RNF38-202ENST00000350199 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
RNF38-202ENST00000350199 ANKRD13DQ6ZTN6 518 aa23.16■■□□□ 1.3
RNF38-202ENST00000350199 UBE3BQ7Z3V4 1068 aa23.16■■□□□ 1.3
RNF38-202ENST00000350199 TBC1D32Q96NH3 1257 aa23.16■■□□□ 1.3
RNF38-202ENST00000350199 ABCA9Q8IUA7 1624 aa23.16■■□□□ 1.3
RNF38-202ENST00000350199 TRPM1Q7Z4N2 1603 aa23.15■■□□□ 1.3
RNF38-202ENST00000350199 PLEKHG1Q9ULL1 1385 aa23.15■■□□□ 1.3
RNF38-202ENST00000350199 STK3Q13188 491 aa23.15■■□□□ 1.3
RNF38-202ENST00000350199 MARCH6O60337 910 aa23.15■■□□□ 1.3
RNF38-202ENST00000350199 SAFBQ15424 915 aaKnown RBP eCLIP23.15■■□□□ 1.3
RNF38-202ENST00000350199 METTL24Q5JXM2 366 aa23.15■■□□□ 1.3
RNF38-202ENST00000350199 UPF3BQ9BZI7 483 aaKnown RBP23.15■■□□□ 1.3
RNF38-202ENST00000350199 MBD3O95983 291 aa23.15■■□□□ 1.3
RNF38-202ENST00000350199 SART3Q15020 963 aaKnown RBP23.14■■□□□ 1.3
RNF38-202ENST00000350199 C8orf34Q49A92 452 aa23.14■■□□□ 1.3
RNF38-202ENST00000350199 ZSCAN25Q6NSZ9 544 aa23.14■■□□□ 1.3
RNF38-202ENST00000350199 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.29
RNF38-202ENST00000350199 BICDL1Q6ZP65 573 aa23.14■■□□□ 1.29
RNF38-202ENST00000350199 CCDC73Q6ZRK6 1079 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 ECHDC1Q9NTX5 307 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
RNF38-202ENST00000350199 CHL1O00533 1208 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 COPS6Q7L5N1 327 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.13■■□□□ 1.29
RNF38-202ENST00000350199 RAD21O60216 631 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 CREBRFQ8IUR6 639 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 AKAP2Q9Y2D5 859 aa23.13■■□□□ 1.29
RNF38-202ENST00000350199 WDR33Q9C0J8 1336 aaKnown RBP23.13■■□□□ 1.29
RNF38-202ENST00000350199 CASTP20810 708 aaKnown RBP23.12■■□□□ 1.29
RNF38-202ENST00000350199 MCM4P33991 863 aa23.12■■□□□ 1.29
RNF38-202ENST00000350199 KSR2Q6VAB6 950 aa23.12■■□□□ 1.29
RNF38-202ENST00000350199 TRIM34Q9BYJ4 488 aa23.12■■□□□ 1.29
RNF38-202ENST00000350199 FIBPO43427 364 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms