RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 ANKRD44Q8N8A2 993 aa13.53□□□□□ -0.24
EPB41-203ENST00000349460 SPG7Q9UQ90 795 aa13.53□□□□□ -0.24
EPB41-203ENST00000349460 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
EPB41-203ENST00000349460 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
EPB41-203ENST00000349460 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
EPB41-203ENST00000349460 SHANK3Q9BYB0 1731 aa13.52□□□□□ -0.24
EPB41-203ENST00000349460 LTBP4Q8N2S1 1624 aa13.52□□□□□ -0.24
EPB41-203ENST00000349460 DCTPP1Q9H773 170 aa13.52□□□□□ -0.24
EPB41-203ENST00000349460 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
EPB41-203ENST00000349460 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
EPB41-203ENST00000349460 LRP6O75581 1613 aa13.52□□□□□ -0.25
EPB41-203ENST00000349460 MEGF6O75095 1541 aa13.51□□□□□ -0.25
EPB41-203ENST00000349460 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
EPB41-203ENST00000349460 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
EPB41-203ENST00000349460 GLI3P10071 1580 aa13.5□□□□□ -0.25
EPB41-203ENST00000349460 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
EPB41-203ENST00000349460 WNK3Q9BYP7 1800 aa13.5□□□□□ -0.25
EPB41-203ENST00000349460 KDM6AO15550 1401 aaPredicted RBP13.5□□□□□ -0.25
EPB41-203ENST00000349460 GNAI3P08754 354 aa13.5□□□□□ -0.25
EPB41-203ENST00000349460 TEFQ10587 303 aa13.5□□□□□ -0.25
EPB41-203ENST00000349460 FLIIQ13045 1269 aa13.5□□□□□ -0.25
EPB41-203ENST00000349460 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
EPB41-203ENST00000349460 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
EPB41-203ENST00000349460 ZNF335Q9H4Z2 1342 aaPredicted RBP13.49□□□□□ -0.25
EPB41-203ENST00000349460 LRRC59Q96AG4 307 aaKnown RBP13.49□□□□□ -0.25
EPB41-203ENST00000349460 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
EPB41-203ENST00000349460 SIRT2Q8IXJ6 389 aa13.49□□□□□ -0.25
EPB41-203ENST00000349460 ELL2O00472 640 aaPredicted RBP13.48□□□□□ -0.25
EPB41-203ENST00000349460 XPCQ01831 940 aaPredicted RBP13.48□□□□□ -0.25
EPB41-203ENST00000349460 BMP2KLQ5H9B9 411 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 HMMRO75330 724 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 PHKG2P15735 406 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
EPB41-203ENST00000349460 C5P01031 1676 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 MSH5O43196 834 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 CEP85Q6P2H3 762 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
EPB41-203ENST00000349460 HDGFL1Q5TGJ6 251 aa13.46□□□□□ -0.25
EPB41-203ENST00000349460 DBF4Q9UBU7 674 aaPredicted RBP13.46□□□□□ -0.25
EPB41-203ENST00000349460 COL15A1P39059 1388 aa13.46□□□□□ -0.25
EPB41-203ENST00000349460 RGS3P49796 1198 aa13.46□□□□□ -0.26
EPB41-203ENST00000349460 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
EPB41-203ENST00000349460 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
EPB41-203ENST00000349460 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
EPB41-203ENST00000349460 ALDH1L1O75891 902 aa13.45□□□□□ -0.26
EPB41-203ENST00000349460 GNAI2P04899 355 aa13.45□□□□□ -0.26
EPB41-203ENST00000349460 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
EPB41-203ENST00000349460 CICQ96RK0 1608 aaPredicted RBP13.44□□□□□ -0.26
EPB41-203ENST00000349460 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
EPB41-203ENST00000349460 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
EPB41-203ENST00000349460 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
EPB41-203ENST00000349460 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
EPB41-203ENST00000349460 ERVV-2B6SEH9 535 aa13.44□□□□□ -0.26
EPB41-203ENST00000349460 ZC3H6P61129 1189 aaKnown RBP13.44□□□□□ -0.26
EPB41-203ENST00000349460 G2E3Q7L622 706 aa13.44□□□□□ -0.26
EPB41-203ENST00000349460 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
EPB41-203ENST00000349460 COL16A1Q07092 1604 aaPredicted RBP13.44□□□□□ -0.26
EPB41-203ENST00000349460 NWD2Q9ULI1 1742 aa13.43□□□□□ -0.26
EPB41-203ENST00000349460 UTYO14607 1347 aa13.43□□□□□ -0.26
EPB41-203ENST00000349460 DISP2A7MBM2 1401 aa13.43□□□□□ -0.26
EPB41-203ENST00000349460 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
EPB41-203ENST00000349460 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
EPB41-203ENST00000349460 MYT1Q01538 1121 aa13.42□□□□□ -0.26
EPB41-203ENST00000349460 AOX1Q06278 1338 aa13.42□□□□□ -0.26
EPB41-203ENST00000349460 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
EPB41-203ENST00000349460 MTX1Q13505 466 aa13.42□□□□□ -0.26
EPB41-203ENST00000349460 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
EPB41-203ENST00000349460 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
EPB41-203ENST00000349460 NRAPQ86VF7 1730 aa13.42□□□□□ -0.26
EPB41-203ENST00000349460 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
EPB41-203ENST00000349460 DDX21Q9NR30 783 aaKnown RBP eCLIP13.42□□□□□ -0.26
EPB41-203ENST00000349460 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
EPB41-203ENST00000349460 ZNF790Q6PG37 636 aa13.41□□□□□ -0.26
EPB41-203ENST00000349460 MPRIPQ6WCQ1 1025 aa13.41□□□□□ -0.26
EPB41-203ENST00000349460 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
EPB41-203ENST00000349460 FKBP5Q13451 457 aaPredicted RBP13.41□□□□□ -0.26
EPB41-203ENST00000349460 MEIS3Q99687 375 aa13.4□□□□□ -0.26
EPB41-203ENST00000349460 ADCY9O60503 1353 aa13.4□□□□□ -0.26
EPB41-203ENST00000349460 KCPQ6ZWJ8 1503 aa13.4□□□□□ -0.26
EPB41-203ENST00000349460 BEND3Q5T5X7 828 aa13.4□□□□□ -0.26
EPB41-203ENST00000349460 SKAP1Q86WV1 359 aa13.4□□□□□ -0.26
EPB41-203ENST00000349460 POLA2Q14181 598 aa13.39□□□□□ -0.27
EPB41-203ENST00000349460 DNAAF4Q8WXU2 420 aa13.39□□□□□ -0.27
EPB41-203ENST00000349460 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
EPB41-203ENST00000349460 CYP27B1O15528 508 aa13.39□□□□□ -0.27
EPB41-203ENST00000349460 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
EPB41-203ENST00000349460 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
EPB41-203ENST00000349460 SSH3Q8TE77 659 aa13.39□□□□□ -0.27
EPB41-203ENST00000349460 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
EPB41-203ENST00000349460 PRDM11Q9NQV5 511 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms