RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SIX5Q8N196 739 aa11.3□□□□□ -0.6
UBE2D3-204ENST00000349311 ZNF395Q9H8N7 513 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-204ENST00000349311 UPP2O95045 317 aa11.29□□□□□ -0.6
UBE2D3-204ENST00000349311 RNF144AP50876 292 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-204ENST00000349311 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-204ENST00000349311 LARGE2Q8N3Y3 721 aa11.29□□□□□ -0.6
UBE2D3-204ENST00000349311 VRTNQ9H8Y1 702 aa11.29□□□□□ -0.6
UBE2D3-204ENST00000349311 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
UBE2D3-204ENST00000349311 ARHGEF10LQ9HCE6 1279 aa11.29□□□□□ -0.6
UBE2D3-204ENST00000349311 FAM196BA6NMK8 535 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 STAU1O95793 577 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 INHAP05111 366 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 BMP2P12643 396 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 GPC1P35052 558 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 CTSOP43234 321 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 ATP1A2P50993 1020 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 PTK7Q13308 1070 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 KIFC2Q96AC6 838 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
UBE2D3-204ENST00000349311 C6orf118Q5T5N4 469 aa11.27□□□□□ -0.61
UBE2D3-204ENST00000349311 SLC4A9Q96Q91 983 aa11.27□□□□□ -0.61
UBE2D3-204ENST00000349311 INSM2Q96T92 566 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-204ENST00000349311 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-204ENST00000349311 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-204ENST00000349311 EEA1Q15075 1411 aa11.26□□□□□ -0.61
UBE2D3-204ENST00000349311 GDF10P55107 478 aa11.26□□□□□ -0.61
UBE2D3-204ENST00000349311 CRTC2Q53ET0 693 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-204ENST00000349311 ARXQ96QS3 562 aa11.26□□□□□ -0.61
UBE2D3-204ENST00000349311 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-204ENST00000349311 GRIP2Q9C0E4 1043 aa11.26□□□□□ -0.61
UBE2D3-204ENST00000349311 BCL11AQ9H165 835 aa11.26□□□□□ -0.61
UBE2D3-204ENST00000349311 CUX1P39880 1505 aa11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 RFX1P22670 979 aa11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 ELOAQ14241 798 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 ESCO1Q5FWF5 840 aa11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 RNF217Q8TC41 542 aa11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 CCER1Q8TC90 406 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 PBXIP1Q96AQ6 731 aa11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 RAB6BQ9NRW1 208 aa11.25□□□□□ -0.61
UBE2D3-204ENST00000349311 M0R2N6 131 aa11.24□□□□□ -0.61
UBE2D3-204ENST00000349311 MTFR1Q15390 333 aa11.24□□□□□ -0.61
UBE2D3-204ENST00000349311 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
UBE2D3-204ENST00000349311 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
UBE2D3-204ENST00000349311 TTLL8A6PVC2 850 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L21D6R901 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 ATG7O95352 703 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 SNRPBP14678 240 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 RASA1P20936 1047 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 CENPCQ03188 943 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 CCDC102BQ68D86 513 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 DNMT3LQ9UJW3 386 aa11.23□□□□□ -0.61
UBE2D3-204ENST00000349311 PPP1R15AO75807 674 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-204ENST00000349311 EPHA4P54764 986 aa11.22□□□□□ -0.61
UBE2D3-204ENST00000349311 DNMBPQ6XZF7 1577 aa11.22□□□□□ -0.61
UBE2D3-204ENST00000349311 ZNF358Q9NW07 568 aa11.22□□□□□ -0.61
UBE2D3-204ENST00000349311 NESP48681 1621 aa11.21□□□□□ -0.61
UBE2D3-204ENST00000349311 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
UBE2D3-204ENST00000349311 ZNF295-AS1Q8N0V1 137 aa11.21□□□□□ -0.61
UBE2D3-204ENST00000349311 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
UBE2D3-204ENST00000349311 ANP32EQ9BTT0 268 aa11.21□□□□□ -0.61
UBE2D3-204ENST00000349311 SPATA31C2B4DYI2 1134 aa11.2□□□□□ -0.62
UBE2D3-204ENST00000349311 MEN1O00255 615 aa11.2□□□□□ -0.62
UBE2D3-204ENST00000349311 LARP1Q6PKG0 1096 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-204ENST00000349311 TPCN2Q8NHX9 752 aa11.2□□□□□ -0.62
UBE2D3-204ENST00000349311 ZMIZ1Q9ULJ6 1067 aa11.2□□□□□ -0.62
UBE2D3-204ENST00000349311 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
UBE2D3-204ENST00000349311 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-204ENST00000349311 SMTNP53814 917 aa11.19□□□□□ -0.62
UBE2D3-204ENST00000349311 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
UBE2D3-204ENST00000349311 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
UBE2D3-204ENST00000349311 POLMQ9NP87 494 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-204ENST00000349311 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-204ENST00000349311 FOXK2Q01167 660 aa11.18□□□□□ -0.62
UBE2D3-204ENST00000349311 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-204ENST00000349311 NLRP3Q96P20 1036 aa11.18□□□□□ -0.62
UBE2D3-204ENST00000349311 BACH1O14867 736 aa11.17□□□□□ -0.62
UBE2D3-204ENST00000349311 DPYDQ12882 1025 aa11.17□□□□□ -0.62
UBE2D3-204ENST00000349311 A6NJY4 79 aa11.16□□□□□ -0.62
UBE2D3-204ENST00000349311 SEC13P55735 322 aa11.16□□□□□ -0.62
UBE2D3-204ENST00000349311 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.16□□□□□ -0.62
UBE2D3-204ENST00000349311 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
UBE2D3-204ENST00000349311 ZNF787Q6DD87 383 aa11.16□□□□□ -0.62
UBE2D3-204ENST00000349311 FIGNL2A6NMB9 653 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 SOBPA7XYQ1 873 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 SFI1A8K8P3 1242 aa11.15□□□□□ -0.62
UBE2D3-204ENST00000349311 CDK2AP1O14519 115 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms