RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 F6X3S4 739 aa25.46■■□□□ 1.67
CHRNA3-202ENST00000348639 BMP2KLQ5H9B9 411 aa25.46■■□□□ 1.67
CHRNA3-202ENST00000348639 CABLES1Q8TDN4 633 aa25.46■■□□□ 1.67
CHRNA3-202ENST00000348639 SLC4A10Q6U841 1118 aa25.46■■□□□ 1.67
CHRNA3-202ENST00000348639 RGPD5Q99666 1765 aa25.44■■□□□ 1.66
CHRNA3-202ENST00000348639 MPRIPQ6WCQ1 1025 aa25.44■■□□□ 1.66
CHRNA3-202ENST00000348639 ERBB3P21860 1342 aa25.44■■□□□ 1.66
CHRNA3-202ENST00000348639 C1orf141Q5JVX7 400 aa25.44■■□□□ 1.66
CHRNA3-202ENST00000348639 HOXB7P09629 217 aa25.43■■□□□ 1.66
CHRNA3-202ENST00000348639 EIF4A1P60842 406 aaKnown RBP25.43■■□□□ 1.66
CHRNA3-202ENST00000348639 FKBP5Q13451 457 aaPredicted RBP25.43■■□□□ 1.66
CHRNA3-202ENST00000348639 TEFQ10587 303 aa25.42■■□□□ 1.66
CHRNA3-202ENST00000348639 HDGFL1Q5TGJ6 251 aa25.42■■□□□ 1.66
CHRNA3-202ENST00000348639 OVOS2A0A0G2JMS6 1433 aa25.42■■□□□ 1.66
CHRNA3-202ENST00000348639 TNS3Q68CZ2 1445 aa25.42■■□□□ 1.66
CHRNA3-202ENST00000348639 KDM3BQ7LBC6 1761 aa25.42■■□□□ 1.66
CHRNA3-202ENST00000348639 XIRP1Q702N8 1843 aaKnown RBP25.42■■□□□ 1.66
CHRNA3-202ENST00000348639 CHMP4AQ9BY43 222 aa25.41■■□□□ 1.66
CHRNA3-202ENST00000348639 ZNF335Q9H4Z2 1342 aaPredicted RBP25.41■■□□□ 1.66
CHRNA3-202ENST00000348639 PXDNQ92626 1479 aa25.41■■□□□ 1.66
CHRNA3-202ENST00000348639 RNMTO43148 476 aaKnown RBP25.41■■□□□ 1.66
CHRNA3-202ENST00000348639 NLRP2Q9NX02 1062 aa25.4■■□□□ 1.66
CHRNA3-202ENST00000348639 BECN1Q14457 450 aa25.39■■□□□ 1.66
CHRNA3-202ENST00000348639 BRINP3Q76B58 766 aa25.39■■□□□ 1.66
CHRNA3-202ENST00000348639 BTBD11A6QL63 1104 aa25.39■■□□□ 1.65
CHRNA3-202ENST00000348639 MFAP1P55081 439 aaKnown RBP25.39■■□□□ 1.65
CHRNA3-202ENST00000348639 SPATA31A3Q5VYP0 1347 aa25.39■■□□□ 1.65
CHRNA3-202ENST00000348639 PXDNLA1KZ92 1463 aa25.38■■□□□ 1.65
CHRNA3-202ENST00000348639 HMMRO75330 724 aa25.38■■□□□ 1.65
CHRNA3-202ENST00000348639 CHRNA2Q15822 529 aa25.38■■□□□ 1.65
CHRNA3-202ENST00000348639 C22orf23Q9BZE7 217 aa25.37■■□□□ 1.65
CHRNA3-202ENST00000348639 GNAI2P04899 355 aa25.37■■□□□ 1.65
CHRNA3-202ENST00000348639 GNAI3P08754 354 aa25.36■■□□□ 1.65
CHRNA3-202ENST00000348639 CSB-PGBD3P0DP91 1061 aa25.36■■□□□ 1.65
CHRNA3-202ENST00000348639 PLEKHM2Q8IWE5 1019 aa25.36■■□□□ 1.65
CHRNA3-202ENST00000348639 RAPGEF4Q8WZA2 1011 aa25.36■■□□□ 1.65
CHRNA3-202ENST00000348639 KCNQ3O43525 872 aa25.35■■□□□ 1.65
CHRNA3-202ENST00000348639 EIF2S2P20042 333 aaKnown RBP25.35■■□□□ 1.65
CHRNA3-202ENST00000348639 N4BP2Q86UW6 1770 aaPredicted RBP25.35■■□□□ 1.65
CHRNA3-202ENST00000348639 RTL5Q5HYW3 569 aaPredicted RBP25.34■■□□□ 1.65
CHRNA3-202ENST00000348639 SLAIN2Q9P270 581 aa25.34■■□□□ 1.65
CHRNA3-202ENST00000348639 PHAXQ9H814 394 aaKnown RBP25.33■■□□□ 1.65
CHRNA3-202ENST00000348639 COL18A1P39060 1754 aa25.33■■□□□ 1.65
CHRNA3-202ENST00000348639 USP35Q9P2H5 1018 aa25.32■■□□□ 1.64
CHRNA3-202ENST00000348639 ABCC6O95255 1503 aa25.32■■□□□ 1.64
CHRNA3-202ENST00000348639 ADAMTS7Q9UKP4 1686 aa25.31■■□□□ 1.64
CHRNA3-202ENST00000348639 BCL11AQ9H165 835 aa25.3■■□□□ 1.64
CHRNA3-202ENST00000348639 CHPF2Q9P2E5 772 aa25.3■■□□□ 1.64
CHRNA3-202ENST00000348639 TATP17735 454 aaPredicted RBP25.29■■□□□ 1.64
CHRNA3-202ENST00000348639 HEG1Q9ULI3 1381 aa25.29■■□□□ 1.64
CHRNA3-202ENST00000348639 C16orf71Q8IYS4 520 aaPredicted RBP25.29■■□□□ 1.64
CHRNA3-202ENST00000348639 PLEKHG2Q9H7P9 1386 aa25.28■■□□□ 1.64
CHRNA3-202ENST00000348639 GSPT1P15170 499 aaKnown RBP25.28■■□□□ 1.64
CHRNA3-202ENST00000348639 RBM25P49756 843 aaKnown RBP25.28■■□□□ 1.64
CHRNA3-202ENST00000348639 TTC22Q5TAA0 569 aa25.28■■□□□ 1.64
CHRNA3-202ENST00000348639 TBC1D9Q6ZT07 1266 aa25.28■■□□□ 1.64
CHRNA3-202ENST00000348639 USP44Q9H0E7 712 aa25.28■■□□□ 1.64
CHRNA3-202ENST00000348639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.28■■□□□ 1.64
CHRNA3-202ENST00000348639 CRYBG1Q9Y4K1 1723 aa25.27■■□□□ 1.64
CHRNA3-202ENST00000348639 CPDO75976 1380 aa25.27■■□□□ 1.64
CHRNA3-202ENST00000348639 SIPA1L3O60292 1781 aaPredicted RBP25.27■■□□□ 1.64
CHRNA3-202ENST00000348639 ATP8B2P98198 1209 aa25.27■■□□□ 1.64
CHRNA3-202ENST00000348639 TBC1D2Q9BYX2 928 aa25.27■■□□□ 1.64
CHRNA3-202ENST00000348639 CDC45O75419 566 aa25.26■■□□□ 1.63
CHRNA3-202ENST00000348639 GIGYF1O75420 1035 aaPredicted RBP25.26■■□□□ 1.63
CHRNA3-202ENST00000348639 SPG7Q9UQ90 795 aa25.26■■□□□ 1.63
CHRNA3-202ENST00000348639 SMARCA5O60264 1052 aaPredicted RBP25.25■■□□□ 1.63
CHRNA3-202ENST00000348639 DBF4Q9UBU7 674 aaPredicted RBP25.25■■□□□ 1.63
CHRNA3-202ENST00000348639 SRCIN1Q9C0H9 1055 aa25.25■■□□□ 1.63
CHRNA3-202ENST00000348639 UBTFL1P0CB47 393 aaPredicted RBP25.24■■□□□ 1.63
CHRNA3-202ENST00000348639 OTUD7AQ8TE49 926 aaPredicted RBP25.24■■□□□ 1.63
CHRNA3-202ENST00000348639 MEGF6O75095 1541 aa25.24■■□□□ 1.63
CHRNA3-202ENST00000348639 APBB1O00213 710 aa25.24■■□□□ 1.63
CHRNA3-202ENST00000348639 LRRFIP2Q9Y608 721 aaKnown RBP25.24■■□□□ 1.63
CHRNA3-202ENST00000348639 SOS2Q07890 1332 aaPredicted RBP25.23■■□□□ 1.63
CHRNA3-202ENST00000348639 EIF5BO60841 1220 aaKnown RBP25.23■■□□□ 1.63
CHRNA3-202ENST00000348639 DNAAF4Q8WXU2 420 aa25.23■■□□□ 1.63
CHRNA3-202ENST00000348639 PRDM11Q9NQV5 511 aa25.23■■□□□ 1.63
CHRNA3-202ENST00000348639 PNMA6EA0A0J9YXQ4 647 aa25.22■■□□□ 1.63
CHRNA3-202ENST00000348639 PHKG2P15735 406 aa25.22■■□□□ 1.63
CHRNA3-202ENST00000348639 PI4KAP2A4QPH2 592 aa25.22■■□□□ 1.63
CHRNA3-202ENST00000348639 ANXA1P04083 346 aa25.22■■□□□ 1.63
CHRNA3-202ENST00000348639 PI4KAP1Q8N8J0 262 aa25.22■■□□□ 1.63
CHRNA3-202ENST00000348639 BEND3Q5T5X7 828 aa25.21■■□□□ 1.63
CHRNA3-202ENST00000348639 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
CHRNA3-202ENST00000348639 KDM6AO15550 1401 aaPredicted RBP25.2■■□□□ 1.63
CHRNA3-202ENST00000348639 NFKBIBQ15653 356 aa25.2■■□□□ 1.63
CHRNA3-202ENST00000348639 SLC52A2Q9HAB3 445 aa25.2■■□□□ 1.63
CHRNA3-202ENST00000348639 IFNL2Q8IZJ0 200 aa25.2■■□□□ 1.62
CHRNA3-202ENST00000348639 OSBPL3Q9H4L5 887 aa25.2■■□□□ 1.62
CHRNA3-202ENST00000348639 EXOC6BQ9Y2D4 811 aa25.2■■□□□ 1.62
CHRNA3-202ENST00000348639 SCN11AQ9UI33 1791 aa25.19■■□□□ 1.62
CHRNA3-202ENST00000348639 ADCY9O60503 1353 aa25.19■■□□□ 1.62
CHRNA3-202ENST00000348639 PRAMEF22A3QJZ6 481 aa25.19■■□□□ 1.62
CHRNA3-202ENST00000348639 IBTKQ9P2D0 1353 aaPredicted RBP25.18■■□□□ 1.62
CHRNA3-202ENST00000348639 LRRCC1Q9C099 1032 aa25.18■■□□□ 1.62
CHRNA3-202ENST00000348639 SLC39A6Q13433 755 aa25.17■■□□□ 1.62
CHRNA3-202ENST00000348639 ZNF790Q6PG37 636 aa25.17■■□□□ 1.62
CHRNA3-202ENST00000348639 NFATC2IPQ8NCF5 419 aa25.17■■□□□ 1.62
CHRNA3-202ENST00000348639 SSH3Q8TE77 659 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms