RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 HIP1O00291 1037 aa12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 TRIM5Q9C035 493 aa12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 ZFYVE27Q5T4F4 411 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 MICALL1Q8N3F8 863 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 TMX1Q9H3N1 280 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 ATF7IPQ6VMQ6 1270 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 NUP133Q8WUM0 1156 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 TIAM1Q13009 1591 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 A0A1B0GUA9 196 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-202ENST00000348513 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
SMARCE1-202ENST00000348513 MIPOL1Q8TD10 442 aa12.97□□□□□ -0.33
SMARCE1-202ENST00000348513 UBXN4Q92575 508 aa12.97□□□□□ -0.33
SMARCE1-202ENST00000348513 MVPQ14764 893 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 PIBF1Q8WXW3 757 aa12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 ODF2Q5BJF6 829 aa12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 POGZQ7Z3K3 1410 aa12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 SMC2O95347 1197 aa12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 NAT10Q9H0A0 1025 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-202ENST00000348513 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.34
SMARCE1-202ENST00000348513 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.34
SMARCE1-202ENST00000348513 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.34
SMARCE1-202ENST00000348513 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.34
SMARCE1-202ENST00000348513 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 KRT18P05783 430 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 EZRP15311 586 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 STK38Q15208 465 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 KRBA2Q6ZNG9 492 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 RNF168Q8IYW5 571 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 ATAD2Q6PL18 1390 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 KINO60870 393 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 ADAMTS2O95450 1211 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 ZSCAN29Q8IWY8 852 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 LRRFIP2Q9Y608 721 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-202ENST00000348513 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 NME9Q86XW9 330 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 CHD1LQ86WJ1 897 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 ANKRD18AQ8IVF6 992 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 NACAP1Q9BZK3 213 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 TMPOP42166 694 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 EPRSP07814 1512 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 WDR97A6NE52 1622 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 ZHX3Q9H4I2 956 aa12.94□□□□□ -0.34
SMARCE1-202ENST00000348513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■■■■■ 127.5
SMARCE1-202ENST00000348513 PAXBP1Q9Y5B6 917 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 ANKRD30BQ9BXX2 1392 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 RSRC1Q96IZ7 334 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 FCHSD2O94868 740 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 LUZP1Q86V48 1076 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 MPNDQ8N594 471 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 PIK3R5Q8WYR1 880 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 EXOC6BQ9Y2D4 811 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 CAGE1Q8TC20 777 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
SMARCE1-202ENST00000348513 GOLGA6L9A6NEM1 432 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 IDH1O75874 414 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 CEP126Q9P2H0 1117 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 RNF187Q5TA31 235 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 ZNF396Q96N95 335 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 TXLNAP40222 546 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
SMARCE1-202ENST00000348513 FOXO3O43524 673 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 ZNF397Q8NF99 534 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 PDCP20941 246 aa12.91□□□□□ -0.34
SMARCE1-202ENST00000348513 CCDC97Q96F63 343 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms