RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 ZNF500O60304 480 aaPredicted RBP19.54■□□□□ 0.72
HMGA1-202ENST00000347617 RABEP1Q15276 862 aa19.54■□□□□ 0.72
HMGA1-202ENST00000347617 CSPP1Q1MSJ5 1256 aa19.54■□□□□ 0.72
HMGA1-202ENST00000347617 NUTM2GQ5VZR2 741 aa19.54■□□□□ 0.72
HMGA1-202ENST00000347617 ARHGAP45Q92619 1136 aa19.54■□□□□ 0.72
HMGA1-202ENST00000347617 DDX49Q9Y6V7 483 aaKnown RBP19.54■□□□□ 0.72
HMGA1-202ENST00000347617 BAG4O95429 457 aaKnown RBP19.53■□□□□ 0.72
HMGA1-202ENST00000347617 AEBP1Q8IUX7 1158 aa19.53■□□□□ 0.72
HMGA1-202ENST00000347617 NPHP3Q7Z494 1330 aa19.53■□□□□ 0.72
HMGA1-202ENST00000347617 CDC45O75419 566 aa19.52■□□□□ 0.72
HMGA1-202ENST00000347617 TSR2Q969E8 191 aaKnown RBP19.52■□□□□ 0.72
HMGA1-202ENST00000347617 HTATSF1O43719 755 aaKnown RBP19.52■□□□□ 0.71
HMGA1-202ENST00000347617 GCP02774 474 aa19.52■□□□□ 0.71
HMGA1-202ENST00000347617 LNPKQ9C0E8 428 aa19.52■□□□□ 0.71
HMGA1-202ENST00000347617 CWC22Q9HCG8 908 aaKnown RBP19.52■□□□□ 0.71
HMGA1-202ENST00000347617 DLG5Q8TDM6 1919 aa19.52■□□□□ 0.71
HMGA1-202ENST00000347617 ARHGEF25Q86VW2 580 aa19.51■□□□□ 0.71
HMGA1-202ENST00000347617 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
HMGA1-202ENST00000347617 PDLIM2Q96JY6 352 aa19.5■□□□□ 0.71
HMGA1-202ENST00000347617 NOL7Q9UMY1 257 aaKnown RBP19.5■□□□□ 0.71
HMGA1-202ENST00000347617 XIRP1Q702N8 1843 aaKnown RBP19.5■□□□□ 0.71
HMGA1-202ENST00000347617 LTN1O94822 1766 aa19.5■□□□□ 0.71
HMGA1-202ENST00000347617 GAS2L2Q8NHY3 880 aa19.49■□□□□ 0.71
HMGA1-202ENST00000347617 SSFA2P28290 1259 aa19.49■□□□□ 0.71
HMGA1-202ENST00000347617 TBC1D9Q6ZT07 1266 aa19.49■□□□□ 0.71
HMGA1-202ENST00000347617 CYP2E1P05181 493 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-202ENST00000347617 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-202ENST00000347617 ANKRD45Q5TZF3 282 aa19.46■□□□□ 0.71
HMGA1-202ENST00000347617 ZBTB7BO15156 539 aaPredicted RBP19.44■□□□□ 0.7
HMGA1-202ENST00000347617 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
HMGA1-202ENST00000347617 CHL1O00533 1208 aa19.44■□□□□ 0.7
HMGA1-202ENST00000347617 DYNC1I1O14576 645 aa19.44■□□□□ 0.7
HMGA1-202ENST00000347617 XPCQ01831 940 aaPredicted RBP19.44■□□□□ 0.7
HMGA1-202ENST00000347617 MTHFSDQ2M296 383 aaKnown RBP19.44■□□□□ 0.7
HMGA1-202ENST00000347617 PXDNQ92626 1479 aa19.43■□□□□ 0.7
HMGA1-202ENST00000347617 ZSCAN23Q3MJ62 389 aa19.43■□□□□ 0.7
HMGA1-202ENST00000347617 MBIPQ9NS73 344 aa19.43■□□□□ 0.7
HMGA1-202ENST00000347617 LMBRD1Q9NUN5 540 aa19.43■□□□□ 0.7
HMGA1-202ENST00000347617 CCDC39Q9UFE4 941 aa19.43■□□□□ 0.7
HMGA1-202ENST00000347617 ZNF335Q9H4Z2 1342 aaPredicted RBP19.43■□□□□ 0.7
HMGA1-202ENST00000347617 TNS3Q68CZ2 1445 aa19.43■□□□□ 0.7
HMGA1-202ENST00000347617 VAMP4O75379 141 aa19.42■□□□□ 0.7
HMGA1-202ENST00000347617 CD2BP2O95400 341 aaKnown RBP19.42■□□□□ 0.7
HMGA1-202ENST00000347617 ABCC6O95255 1503 aa19.42■□□□□ 0.7
HMGA1-202ENST00000347617 AK9Q5TCS8 1911 aa19.42■□□□□ 0.7
HMGA1-202ENST00000347617 SPATA31A3Q5VYP0 1347 aa19.42■□□□□ 0.7
HMGA1-202ENST00000347617 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
HMGA1-202ENST00000347617 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
HMGA1-202ENST00000347617 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
HMGA1-202ENST00000347617 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
HMGA1-202ENST00000347617 ZKSCAN5Q9Y2L8 839 aa19.42■□□□□ 0.7
HMGA1-202ENST00000347617 KIAA0232Q92628 1395 aa19.41■□□□□ 0.7
HMGA1-202ENST00000347617 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
HMGA1-202ENST00000347617 BRINP3Q76B58 766 aa19.41■□□□□ 0.7
HMGA1-202ENST00000347617 CRB1P82279 1406 aa19.4■□□□□ 0.7
HMGA1-202ENST00000347617 ABCC4O15439 1325 aa19.4■□□□□ 0.7
HMGA1-202ENST00000347617 LMOD2Q6P5Q4 547 aa19.4■□□□□ 0.7
HMGA1-202ENST00000347617 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
HMGA1-202ENST00000347617 ST18O60284 1047 aa19.39■□□□□ 0.7
HMGA1-202ENST00000347617 MCTP1Q6DN14 999 aa19.39■□□□□ 0.7
HMGA1-202ENST00000347617 PLEKHG2Q9H7P9 1386 aa19.39■□□□□ 0.69
HMGA1-202ENST00000347617 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.69
HMGA1-202ENST00000347617 MBD3O95983 291 aa19.39■□□□□ 0.69
HMGA1-202ENST00000347617 NBPF6Q5VWK0 638 aa19.39■□□□□ 0.69
HMGA1-202ENST00000347617 INTS3Q68E01 1043 aaKnown RBP19.39■□□□□ 0.69
HMGA1-202ENST00000347617 CASC1Q6TDU7 716 aa19.39■□□□□ 0.69
HMGA1-202ENST00000347617 MRPL50Q8N5N7 158 aaKnown RBP19.39■□□□□ 0.69
HMGA1-202ENST00000347617 NBPF4Q96M43 638 aa19.39■□□□□ 0.69
HMGA1-202ENST00000347617 SOS2Q07890 1332 aaPredicted RBP19.38■□□□□ 0.69
HMGA1-202ENST00000347617 CAVIN1Q6NZI2 390 aaKnown RBP19.38■□□□□ 0.69
HMGA1-202ENST00000347617 SASS6Q6UVJ0 657 aa19.38■□□□□ 0.69
HMGA1-202ENST00000347617 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
HMGA1-202ENST00000347617 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
HMGA1-202ENST00000347617 LRSAM1Q6UWE0 723 aa19.37■□□□□ 0.69
HMGA1-202ENST00000347617 SMAP1Q8IYB5 467 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-202ENST00000347617 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-202ENST00000347617 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
HMGA1-202ENST00000347617 R3HCC1Q9Y3T6 440 aaKnown RBP19.37■□□□□ 0.69
HMGA1-202ENST00000347617 CAMTA1Q9Y6Y1 1673 aa19.37■□□□□ 0.69
HMGA1-202ENST00000347617 AMOTQ4VCS5 1084 aa19.37■□□□□ 0.69
HMGA1-202ENST00000347617 CPDO75976 1380 aa19.36■□□□□ 0.69
HMGA1-202ENST00000347617 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-202ENST00000347617 MCM10Q7L590 875 aa19.36■□□□□ 0.69
HMGA1-202ENST00000347617 RBSNQ9H1K0 784 aa19.36■□□□□ 0.69
HMGA1-202ENST00000347617 MAP3K5Q99683 1374 aa19.36■□□□□ 0.69
HMGA1-202ENST00000347617 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
HMGA1-202ENST00000347617 ANKRD24Q8TF21 1146 aa19.35■□□□□ 0.69
HMGA1-202ENST00000347617 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
HMGA1-202ENST00000347617 USP26Q9BXU7 913 aa19.35■□□□□ 0.69
HMGA1-202ENST00000347617 UQCRHLA0A096LP55 91 aa19.34■□□□□ 0.69
HMGA1-202ENST00000347617 UQCRHP07919 91 aa19.34■□□□□ 0.69
HMGA1-202ENST00000347617 TTC22Q5TAA0 569 aa19.34■□□□□ 0.69
HMGA1-202ENST00000347617 NCLP19338 710 aaKnown RBP19.34■□□□□ 0.69
HMGA1-202ENST00000347617 PLEKHO1Q53GL0 409 aaPredicted RBP19.34■□□□□ 0.69
HMGA1-202ENST00000347617 KLHL34Q8N239 644 aa19.34■□□□□ 0.69
HMGA1-202ENST00000347617 LRRC37A3O60309 1634 aa19.33■□□□□ 0.69
HMGA1-202ENST00000347617 PLEKHM2Q8IWE5 1019 aa19.33■□□□□ 0.68
HMGA1-202ENST00000347617 TSPYL6Q8N831 410 aa19.33■□□□□ 0.68
HMGA1-202ENST00000347617 C8orf58Q8NAV2 365 aa19.33■□□□□ 0.68
HMGA1-202ENST00000347617 DCTPP1Q9H773 170 aa19.33■□□□□ 0.68
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