RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 CHRNA2Q15822 529 aa23.28■■□□□ 1.32
ATRIP-202ENST00000346691 KDM3BQ7LBC6 1761 aa23.28■■□□□ 1.32
ATRIP-202ENST00000346691 LMTK3Q96Q04 1460 aa23.28■■□□□ 1.32
ATRIP-202ENST00000346691 ANKRD44Q8N8A2 993 aa23.28■■□□□ 1.32
ATRIP-202ENST00000346691 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
ATRIP-202ENST00000346691 HDGFL1Q5TGJ6 251 aa23.27■■□□□ 1.32
ATRIP-202ENST00000346691 BABAM1Q9NWV8 329 aa23.27■■□□□ 1.32
ATRIP-202ENST00000346691 EIF2S2P20042 333 aaKnown RBP23.27■■□□□ 1.32
ATRIP-202ENST00000346691 PHAXQ9H814 394 aaKnown RBP23.27■■□□□ 1.32
ATRIP-202ENST00000346691 RNMTO43148 476 aaKnown RBP23.26■■□□□ 1.31
ATRIP-202ENST00000346691 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
ATRIP-202ENST00000346691 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
ATRIP-202ENST00000346691 TEFQ10587 303 aa23.26■■□□□ 1.31
ATRIP-202ENST00000346691 AMOTQ4VCS5 1084 aa23.25■■□□□ 1.31
ATRIP-202ENST00000346691 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
ATRIP-202ENST00000346691 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
ATRIP-202ENST00000346691 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
ATRIP-202ENST00000346691 DCTPP1Q9H773 170 aa23.25■■□□□ 1.31
ATRIP-202ENST00000346691 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
ATRIP-202ENST00000346691 ZNF335Q9H4Z2 1342 aaPredicted RBP23.25■■□□□ 1.31
ATRIP-202ENST00000346691 APBB1O00213 710 aa23.24■■□□□ 1.31
ATRIP-202ENST00000346691 MFAP1P55081 439 aaKnown RBP23.24■■□□□ 1.31
ATRIP-202ENST00000346691 COL18A1P39060 1754 aa23.24■■□□□ 1.31
ATRIP-202ENST00000346691 TBC1D32Q96NH3 1257 aa23.24■■□□□ 1.31
ATRIP-202ENST00000346691 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
ATRIP-202ENST00000346691 C16orf71Q8IYS4 520 aaPredicted RBP23.23■■□□□ 1.31
ATRIP-202ENST00000346691 ANXA1P04083 346 aa23.23■■□□□ 1.31
ATRIP-202ENST00000346691 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
ATRIP-202ENST00000346691 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
ATRIP-202ENST00000346691 RPAP2Q8IXW5 612 aaPredicted RBP23.22■■□□□ 1.31
ATRIP-202ENST00000346691 SPATA31A3Q5VYP0 1347 aa23.22■■□□□ 1.31
ATRIP-202ENST00000346691 SMARCA5O60264 1052 aaPredicted RBP23.21■■□□□ 1.31
ATRIP-202ENST00000346691 CHPF2Q9P2E5 772 aa23.21■■□□□ 1.31
ATRIP-202ENST00000346691 CACNA1FO60840 1977 aa23.21■■□□□ 1.31
ATRIP-202ENST00000346691 IL27Q8NEV9 243 aa23.21■■□□□ 1.31
ATRIP-202ENST00000346691 OTUD7AQ8TE49 926 aaPredicted RBP23.21■■□□□ 1.31
ATRIP-202ENST00000346691 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
ATRIP-202ENST00000346691 UPF2Q9HAU5 1272 aaKnown RBP23.2■■□□□ 1.3
ATRIP-202ENST00000346691 DAXXQ9UER7 740 aaPredicted RBP23.2■■□□□ 1.3
ATRIP-202ENST00000346691 MEGF6O75095 1541 aa23.19■■□□□ 1.3
ATRIP-202ENST00000346691 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
ATRIP-202ENST00000346691 CSB-PGBD3P0DP91 1061 aa23.18■■□□□ 1.3
ATRIP-202ENST00000346691 BMP2KLQ5H9B9 411 aa23.18■■□□□ 1.3
ATRIP-202ENST00000346691 PLEKHM2Q8IWE5 1019 aa23.17■■□□□ 1.3
ATRIP-202ENST00000346691 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
ATRIP-202ENST00000346691 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
ATRIP-202ENST00000346691 GSPT1P15170 499 aaKnown RBP23.16■■□□□ 1.3
ATRIP-202ENST00000346691 GNAI2P04899 355 aa23.15■■□□□ 1.3
ATRIP-202ENST00000346691 C22orf23Q9BZE7 217 aa23.15■■□□□ 1.3
ATRIP-202ENST00000346691 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.3
ATRIP-202ENST00000346691 PNMA6EA0A0J9YXQ4 647 aa23.14■■□□□ 1.29
ATRIP-202ENST00000346691 PROSER3Q2NL68 480 aa23.14■■□□□ 1.29
ATRIP-202ENST00000346691 KDM6AO15550 1401 aaPredicted RBP23.14■■□□□ 1.29
ATRIP-202ENST00000346691 SLC39A6Q13433 755 aa23.13■■□□□ 1.29
ATRIP-202ENST00000346691 USP44Q9H0E7 712 aa23.13■■□□□ 1.29
ATRIP-202ENST00000346691 ADAMTS7Q9UKP4 1686 aa23.13■■□□□ 1.29
ATRIP-202ENST00000346691 SLAIN2Q9P270 581 aa23.13■■□□□ 1.29
ATRIP-202ENST00000346691 LRRFIP2Q9Y608 721 aaKnown RBP23.13■■□□□ 1.29
ATRIP-202ENST00000346691 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
ATRIP-202ENST00000346691 EXOC6BQ9Y2D4 811 aa23.12■■□□□ 1.29
ATRIP-202ENST00000346691 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
ATRIP-202ENST00000346691 GIGYF1O75420 1035 aaPredicted RBP23.12■■□□□ 1.29
ATRIP-202ENST00000346691 HOXB7P09629 217 aa23.11■■□□□ 1.29
ATRIP-202ENST00000346691 ANO8Q9HCE9 1232 aaPredicted RBP23.11■■□□□ 1.29
ATRIP-202ENST00000346691 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
ATRIP-202ENST00000346691 PHKG2P15735 406 aa23.11■■□□□ 1.29
ATRIP-202ENST00000346691 TBC1D9Q6ZT07 1266 aa23.11■■□□□ 1.29
ATRIP-202ENST00000346691 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
ATRIP-202ENST00000346691 PXDNLA1KZ92 1463 aa23.1■■□□□ 1.29
ATRIP-202ENST00000346691 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
ATRIP-202ENST00000346691 GNAI3P08754 354 aa23.1■■□□□ 1.29
ATRIP-202ENST00000346691 ADCY9O60503 1353 aa23.09■■□□□ 1.29
ATRIP-202ENST00000346691 HEG1Q9ULI3 1381 aa23.09■■□□□ 1.29
ATRIP-202ENST00000346691 HMMRO75330 724 aa23.09■■□□□ 1.29
ATRIP-202ENST00000346691 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
ATRIP-202ENST00000346691 CYP27B1O15528 508 aa23.08■■□□□ 1.28
ATRIP-202ENST00000346691 TTC22Q5TAA0 569 aa23.08■■□□□ 1.28
ATRIP-202ENST00000346691 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.28
ATRIP-202ENST00000346691 CPDO75976 1380 aa23.07■■□□□ 1.28
ATRIP-202ENST00000346691 SRCIN1Q9C0H9 1055 aa23.07■■□□□ 1.28
ATRIP-202ENST00000346691 ATP8B2P98198 1209 aa23.07■■□□□ 1.28
ATRIP-202ENST00000346691 SLC52A2Q9HAB3 445 aa23.07■■□□□ 1.28
ATRIP-202ENST00000346691 RTN4Q9NQC3 1192 aaKnown RBP23.07■■□□□ 1.28
ATRIP-202ENST00000346691 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
ATRIP-202ENST00000346691 UBTFL1P0CB47 393 aaPredicted RBP23.06■■□□□ 1.28
ATRIP-202ENST00000346691 BEND3Q5T5X7 828 aa23.06■■□□□ 1.28
ATRIP-202ENST00000346691 DNAAF4Q8WXU2 420 aa23.06■■□□□ 1.28
ATRIP-202ENST00000346691 NBPF7P0C2Y1 421 aaPredicted RBP23.06■■□□□ 1.28
ATRIP-202ENST00000346691 SOS2Q07890 1332 aaPredicted RBP23.06■■□□□ 1.28
ATRIP-202ENST00000346691 C5P01031 1676 aa23.05■■□□□ 1.28
ATRIP-202ENST00000346691 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
ATRIP-202ENST00000346691 DBF4Q9UBU7 674 aaPredicted RBP23.05■■□□□ 1.28
ATRIP-202ENST00000346691 TSHZ3Q63HK5 1081 aa23.05■■□□□ 1.28
ATRIP-202ENST00000346691 BECN1Q14457 450 aa23.04■■□□□ 1.28
ATRIP-202ENST00000346691 ZNF790Q6PG37 636 aa23.04■■□□□ 1.28
ATRIP-202ENST00000346691 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
ATRIP-202ENST00000346691 SLKQ9H2G2 1235 aaPredicted RBP23.03■■□□□ 1.28
ATRIP-202ENST00000346691 NFKBIBQ15653 356 aa23.03■■□□□ 1.28
ATRIP-202ENST00000346691 PKD1L3Q7Z443 1732 aa23.02■■□□□ 1.28
ATRIP-202ENST00000346691 ABCC6O95255 1503 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms