RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 NUTM1Q86Y26 1132 aa18.27■□□□□ 0.52
SRPK1-201ENST00000346162 ZNF830Q96NB3 372 aaPredicted RBP18.27■□□□□ 0.52
SRPK1-201ENST00000346162 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
SRPK1-201ENST00000346162 WDR7Q9Y4E6 1490 aa18.27■□□□□ 0.52
SRPK1-201ENST00000346162 DHX8Q14562 1220 aaKnown RBP18.27■□□□□ 0.52
SRPK1-201ENST00000346162 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.52
SRPK1-201ENST00000346162 SAMD9Q5K651 1589 aa18.27■□□□□ 0.51
SRPK1-201ENST00000346162 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.51
SRPK1-201ENST00000346162 CLSTN1O94985 981 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 ZSCAN23Q3MJ62 389 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 KIF1BPQ96EK5 621 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 SAFBQ15424 915 aaKnown RBP eCLIP18.26■□□□□ 0.51
SRPK1-201ENST00000346162 AXDND1Q5T1B0 1012 aaPredicted RBP18.26■□□□□ 0.51
SRPK1-201ENST00000346162 FILIP1Q7Z7B0 1213 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 SDF4Q9BRK5 362 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 DDX54Q8TDD1 881 aaKnown RBP18.26■□□□□ 0.51
SRPK1-201ENST00000346162 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 PIK3C2GO75747 1445 aa18.26■□□□□ 0.51
SRPK1-201ENST00000346162 PUS7Q96PZ0 661 aaKnown RBP18.26■□□□□ 0.51
SRPK1-201ENST00000346162 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
SRPK1-201ENST00000346162 FAM177BA6PVY3 158 aa18.25■□□□□ 0.51
SRPK1-201ENST00000346162 BMP2KLQ5H9B9 411 aa18.25■□□□□ 0.51
SRPK1-201ENST00000346162 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
SRPK1-201ENST00000346162 ACEP12821 1306 aa18.25■□□□□ 0.51
SRPK1-201ENST00000346162 EIF3JO75822 258 aaKnown RBP18.25■□□□□ 0.51
SRPK1-201ENST00000346162 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
SRPK1-201ENST00000346162 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
SRPK1-201ENST00000346162 KIF6Q6ZMV9 814 aa18.25■□□□□ 0.51
SRPK1-201ENST00000346162 EIF2AK4Q9P2K8 1649 aaKnown RBP18.24■□□□□ 0.51
SRPK1-201ENST00000346162 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
SRPK1-201ENST00000346162 PTPRCP08575 1304 aa18.24■□□□□ 0.51
SRPK1-201ENST00000346162 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
SRPK1-201ENST00000346162 ADCY5O95622 1261 aa18.24■□□□□ 0.51
SRPK1-201ENST00000346162 HDAC1Q13547 482 aaPredicted RBP18.24■□□□□ 0.51
SRPK1-201ENST00000346162 KIF18AQ8NI77 898 aa18.24■□□□□ 0.51
SRPK1-201ENST00000346162 RBM27Q9P2N5 1060 aaKnown RBP18.24■□□□□ 0.51
SRPK1-201ENST00000346162 FEZ1Q99689 392 aa18.24■□□□□ 0.51
SRPK1-201ENST00000346162 KIAA0754O94854 1291 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 CDR1P51861 262 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 FLIIQ13045 1269 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 BMS1Q14692 1282 aaKnown RBP18.23■□□□□ 0.51
SRPK1-201ENST00000346162 ANKRD1Q15327 319 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 HOOK1Q9UJC3 728 aaKnown RBP18.23■□□□□ 0.51
SRPK1-201ENST00000346162 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 BLOC1S2Q6QNY1 142 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 UPF3BQ9BZI7 483 aaKnown RBP18.23■□□□□ 0.51
SRPK1-201ENST00000346162 SMC2O95347 1197 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 NOL7Q9UMY1 257 aaKnown RBP18.23■□□□□ 0.51
SRPK1-201ENST00000346162 CCDC158Q5M9N0 1113 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
SRPK1-201ENST00000346162 FOXO3O43524 673 aa18.22■□□□□ 0.51
SRPK1-201ENST00000346162 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
SRPK1-201ENST00000346162 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
SRPK1-201ENST00000346162 FMNL2Q96PY5 1086 aa18.22■□□□□ 0.51
SRPK1-201ENST00000346162 RAB11FIP3O75154 756 aa18.22■□□□□ 0.51
SRPK1-201ENST00000346162 IPO7O95373 1038 aaKnown RBP18.22■□□□□ 0.51
SRPK1-201ENST00000346162 STK3Q13188 491 aa18.22■□□□□ 0.51
SRPK1-201ENST00000346162 CCDC191Q8NCU4 936 aa18.22■□□□□ 0.51
SRPK1-201ENST00000346162 LRRFIP2Q9Y608 721 aaKnown RBP18.22■□□□□ 0.51
SRPK1-201ENST00000346162 HSP90AB2PQ58FF8 381 aa18.21■□□□□ 0.51
SRPK1-201ENST00000346162 RBM33Q96EV2 1170 aaKnown RBP18.21■□□□□ 0.51
SRPK1-201ENST00000346162 OGFRQ9NZT2 677 aa18.21■□□□□ 0.51
SRPK1-201ENST00000346162 FAM177A1Q8N128 213 aaPredicted RBP18.21■□□□□ 0.51
SRPK1-201ENST00000346162 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
SRPK1-201ENST00000346162 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
SRPK1-201ENST00000346162 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
SRPK1-201ENST00000346162 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
SRPK1-201ENST00000346162 TNMDQ9H2S6 317 aa18.21■□□□□ 0.51
SRPK1-201ENST00000346162 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
SRPK1-201ENST00000346162 TTC12Q9H892 705 aaPredicted RBP18.21■□□□□ 0.5
SRPK1-201ENST00000346162 PDILTQ8N807 584 aa18.2■□□□□ 0.5
SRPK1-201ENST00000346162 ZFP91Q96JP5 570 aaPredicted RBP18.2■□□□□ 0.5
SRPK1-201ENST00000346162 CNNM1Q9NRU3 951 aa18.2■□□□□ 0.5
SRPK1-201ENST00000346162 PDRG1Q9NUG6 133 aa18.2■□□□□ 0.5
SRPK1-201ENST00000346162 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
SRPK1-201ENST00000346162 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
SRPK1-201ENST00000346162 KINO60870 393 aaKnown RBP18.2■□□□□ 0.5
SRPK1-201ENST00000346162 ERLIN1O75477 346 aa18.2■□□□□ 0.5
SRPK1-201ENST00000346162 RLBP1P12271 317 aa18.2■□□□□ 0.5
SRPK1-201ENST00000346162 MPRIPQ6WCQ1 1025 aa18.2■□□□□ 0.5
SRPK1-201ENST00000346162 LRSAM1Q6UWE0 723 aa18.19■□□□□ 0.5
SRPK1-201ENST00000346162 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
SRPK1-201ENST00000346162 CCDC102AQ96A19 550 aa18.19■□□□□ 0.5
SRPK1-201ENST00000346162 DHX16O60231 1041 aaKnown RBP18.19■□□□□ 0.5
SRPK1-201ENST00000346162 TTC39AQ5SRH9 613 aa18.19■□□□□ 0.5
SRPK1-201ENST00000346162 KRT85P78386 507 aa18.19■□□□□ 0.5
SRPK1-201ENST00000346162 KIF2AO00139 706 aaPredicted RBP18.19■□□□□ 0.5
SRPK1-201ENST00000346162 PRIM1P49642 420 aaKnown RBP18.19■□□□□ 0.5
SRPK1-201ENST00000346162 CCDC57Q2TAC2 916 aa18.19■□□□□ 0.5
SRPK1-201ENST00000346162 ZSCAN31Q96LW9 406 aaPredicted RBP18.18■□□□□ 0.5
SRPK1-201ENST00000346162 CEP126Q9P2H0 1117 aa18.18■□□□□ 0.5
SRPK1-201ENST00000346162 CEBPZQ03701 1054 aaKnown RBP18.18■□□□□ 0.5
SRPK1-201ENST00000346162 NUCB1Q02818 461 aa18.18■□□□□ 0.5
SRPK1-201ENST00000346162 DMTNQ08495 405 aa18.18■□□□□ 0.5
SRPK1-201ENST00000346162 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
SRPK1-201ENST00000346162 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
SRPK1-201ENST00000346162 LMAN1P49257 510 aa18.17■□□□□ 0.5
SRPK1-201ENST00000346162 CENPHQ9H3R5 247 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms