RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 EXOC6BQ9Y2D4 811 aa19.13■□□□□ 0.65
UPF3B-202ENST00000345865 PNMA6EA0A0J9YXQ4 647 aa19.12■□□□□ 0.65
UPF3B-202ENST00000345865 PHAXQ9H814 394 aaKnown RBP19.12■□□□□ 0.65
UPF3B-202ENST00000345865 ADAMTSL3P82987 1691 aa19.12■□□□□ 0.65
UPF3B-202ENST00000345865 USP26Q9BXU7 913 aa19.11■□□□□ 0.65
UPF3B-202ENST00000345865 SOS1Q07889 1333 aaPredicted RBP19.11■□□□□ 0.65
UPF3B-202ENST00000345865 MED1Q15648 1581 aaPredicted RBP19.11■□□□□ 0.65
UPF3B-202ENST00000345865 PLEKHG5O94827 1062 aa19.11■□□□□ 0.65
UPF3B-202ENST00000345865 HSP90AB1P08238 724 aaKnown RBP19.11■□□□□ 0.65
UPF3B-202ENST00000345865 HDGFL1Q5TGJ6 251 aa19.1■□□□□ 0.65
UPF3B-202ENST00000345865 N4BP2Q86UW6 1770 aaPredicted RBP19.1■□□□□ 0.65
UPF3B-202ENST00000345865 PHRF1Q9P1Y6 1649 aaKnown RBP19.1■□□□□ 0.65
UPF3B-202ENST00000345865 KCNQ3O43525 872 aa19.09■□□□□ 0.65
UPF3B-202ENST00000345865 PDE1AP54750 535 aa19.09■□□□□ 0.65
UPF3B-202ENST00000345865 KCNH5Q8NCM2 988 aa19.09■□□□□ 0.65
UPF3B-202ENST00000345865 USP44Q9H0E7 712 aa19.09■□□□□ 0.65
UPF3B-202ENST00000345865 NPHP4O75161 1426 aaPredicted RBP19.09■□□□□ 0.65
UPF3B-202ENST00000345865 K7ELQ4 463 aaPredicted RBP19.09■□□□□ 0.65
UPF3B-202ENST00000345865 EIF4A1P60842 406 aaKnown RBP19.09■□□□□ 0.65
UPF3B-202ENST00000345865 OSBPL3Q9H4L5 887 aa19.09■□□□□ 0.65
UPF3B-202ENST00000345865 SALL3Q9BXA9 1300 aa19.09■□□□□ 0.65
UPF3B-202ENST00000345865 GNAI3P08754 354 aa19.08■□□□□ 0.65
UPF3B-202ENST00000345865 ATP8B2P98198 1209 aa19.08■□□□□ 0.65
UPF3B-202ENST00000345865 TSHZ3Q63HK5 1081 aa19.08■□□□□ 0.65
UPF3B-202ENST00000345865 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.65
UPF3B-202ENST00000345865 LRRFIP2Q9Y608 721 aaKnown RBP19.08■□□□□ 0.65
UPF3B-202ENST00000345865 GCP02774 474 aa19.08■□□□□ 0.64
UPF3B-202ENST00000345865 KDM3BQ7LBC6 1761 aa19.07■□□□□ 0.64
UPF3B-202ENST00000345865 EIF2S2P20042 333 aaKnown RBP19.07■□□□□ 0.64
UPF3B-202ENST00000345865 ARHGEF25Q86VW2 580 aa19.07■□□□□ 0.64
UPF3B-202ENST00000345865 PXDNLA1KZ92 1463 aa19.06■□□□□ 0.64
UPF3B-202ENST00000345865 TNPO1Q92973 898 aaKnown RBP19.06■□□□□ 0.64
UPF3B-202ENST00000345865 TUBGCP6Q96RT7 1819 aa19.05■□□□□ 0.64
UPF3B-202ENST00000345865 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
UPF3B-202ENST00000345865 MPRIPQ6WCQ1 1025 aa19.05■□□□□ 0.64
UPF3B-202ENST00000345865 IBTKQ9P2D0 1353 aaPredicted RBP19.05■□□□□ 0.64
UPF3B-202ENST00000345865 PXDNQ92626 1479 aa19.05■□□□□ 0.64
UPF3B-202ENST00000345865 ZNF530Q6P9A1 599 aaPredicted RBP19.05■□□□□ 0.64
UPF3B-202ENST00000345865 LRRCC1Q9C099 1032 aa19.05■□□□□ 0.64
UPF3B-202ENST00000345865 SLIT3O75094 1523 aa19.04■□□□□ 0.64
UPF3B-202ENST00000345865 AKAP4Q5JQC9 854 aa19.04■□□□□ 0.64
UPF3B-202ENST00000345865 CHPF2Q9P2E5 772 aa19.04■□□□□ 0.64
UPF3B-202ENST00000345865 CIZ1Q9ULV3 898 aaPredicted RBP19.04■□□□□ 0.64
UPF3B-202ENST00000345865 AXIN2Q9Y2T1 843 aa19.04■□□□□ 0.64
UPF3B-202ENST00000345865 RAB3GAP1Q15042 981 aa19.03■□□□□ 0.64
UPF3B-202ENST00000345865 LMOD2Q6P5Q4 547 aa19.03■□□□□ 0.64
UPF3B-202ENST00000345865 ANXA1P04083 346 aa19.03■□□□□ 0.64
UPF3B-202ENST00000345865 RABEP1Q15276 862 aa19.03■□□□□ 0.64
UPF3B-202ENST00000345865 TRAK2O60296 914 aa19.02■□□□□ 0.64
UPF3B-202ENST00000345865 UBTFL1P0CB47 393 aaPredicted RBP19.02■□□□□ 0.64
UPF3B-202ENST00000345865 NCAPD2Q15021 1401 aa19.02■□□□□ 0.64
UPF3B-202ENST00000345865 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
UPF3B-202ENST00000345865 BTBD11A6QL63 1104 aa19.01■□□□□ 0.63
UPF3B-202ENST00000345865 HSP90AA1P07900 732 aaKnown RBP19.01■□□□□ 0.63
UPF3B-202ENST00000345865 PLEKHO1Q53GL0 409 aaPredicted RBP19.01■□□□□ 0.63
UPF3B-202ENST00000345865 CASC1Q6TDU7 716 aa19.01■□□□□ 0.63
UPF3B-202ENST00000345865 ANKRD24Q8TF21 1146 aa19.01■□□□□ 0.63
UPF3B-202ENST00000345865 GZF1Q9H116 711 aaPredicted RBP19.01■□□□□ 0.63
UPF3B-202ENST00000345865 EIF5BO60841 1220 aaKnown RBP19.01■□□□□ 0.63
UPF3B-202ENST00000345865 MX1P20591 662 aa19.01■□□□□ 0.63
UPF3B-202ENST00000345865 TEFQ10587 303 aa19.01■□□□□ 0.63
UPF3B-202ENST00000345865 HOXB7P09629 217 aa19■□□□□ 0.63
UPF3B-202ENST00000345865 NBPF7P0C2Y1 421 aaPredicted RBP19■□□□□ 0.63
UPF3B-202ENST00000345865 SSH3Q8TE77 659 aa19■□□□□ 0.63
UPF3B-202ENST00000345865 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
UPF3B-202ENST00000345865 PI4KAP2A4QPH2 592 aa19■□□□□ 0.63
UPF3B-202ENST00000345865 ERC2O15083 957 aa19■□□□□ 0.63
UPF3B-202ENST00000345865 RNMTO43148 476 aaKnown RBP19■□□□□ 0.63
UPF3B-202ENST00000345865 PI4KAP1Q8N8J0 262 aa19■□□□□ 0.63
UPF3B-202ENST00000345865 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
UPF3B-202ENST00000345865 BEND3Q5T5X7 828 aa18.99■□□□□ 0.63
UPF3B-202ENST00000345865 KRT28Q7Z3Y7 464 aa18.99■□□□□ 0.63
UPF3B-202ENST00000345865 RGPD5Q99666 1765 aa18.99■□□□□ 0.63
UPF3B-202ENST00000345865 AK9Q5TCS8 1911 aa18.99■□□□□ 0.63
UPF3B-202ENST00000345865 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
UPF3B-202ENST00000345865 REC8O95072 547 aa18.98■□□□□ 0.63
UPF3B-202ENST00000345865 AMOTQ4VCS5 1084 aa18.98■□□□□ 0.63
UPF3B-202ENST00000345865 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
UPF3B-202ENST00000345865 IL1RAPL2Q9NP60 686 aa18.98■□□□□ 0.63
UPF3B-202ENST00000345865 STAP2Q9UGK3 403 aa18.98■□□□□ 0.63
UPF3B-202ENST00000345865 DDX11L8A8MPP1 907 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 DNAAF4Q8WXU2 420 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 ADCY9O60503 1353 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 PRAMEF22A3QJZ6 481 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 SSFA2P28290 1259 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 POLA2Q14181 598 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
UPF3B-202ENST00000345865 CAMTA1Q9Y6Y1 1673 aa18.96■□□□□ 0.63
UPF3B-202ENST00000345865 PROSER3Q2NL68 480 aa18.96■□□□□ 0.63
UPF3B-202ENST00000345865 C1orf141Q5JVX7 400 aa18.96■□□□□ 0.63
UPF3B-202ENST00000345865 ESYT1Q9BSJ8 1104 aa18.95■□□□□ 0.62
UPF3B-202ENST00000345865 FSD2A1L4K1 749 aa18.95■□□□□ 0.62
UPF3B-202ENST00000345865 GIGYF1O75420 1035 aaPredicted RBP18.95■□□□□ 0.62
UPF3B-202ENST00000345865 HEG1Q9ULI3 1381 aa18.94■□□□□ 0.62
UPF3B-202ENST00000345865 SURF6O75683 361 aaKnown RBP18.94■□□□□ 0.62
UPF3B-202ENST00000345865 CHMLP26374 656 aa18.94■□□□□ 0.62
UPF3B-202ENST00000345865 NUTM1Q86Y26 1132 aa18.94■□□□□ 0.62
UPF3B-202ENST00000345865 RILPL2Q969X0 211 aa18.94■□□□□ 0.62
UPF3B-202ENST00000345865 SRGAP3O43295 1099 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms