RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 RNMTO43148 476 aaKnown RBP23.17■■□□□ 1.3
RBM38-202ENST00000344785 CCT4P50991 539 aaKnown RBP23.17■■□□□ 1.3
RBM38-202ENST00000344785 HDGFL1Q5TGJ6 251 aa23.17■■□□□ 1.3
RBM38-202ENST00000344785 BCL11AQ9H165 835 aa23.17■■□□□ 1.3
RBM38-202ENST00000344785 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
RBM38-202ENST00000344785 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
RBM38-202ENST00000344785 EIF2S2P20042 333 aaKnown RBP23.16■■□□□ 1.3
RBM38-202ENST00000344785 CADPS2Q86UW7 1296 aa23.16■■□□□ 1.3
RBM38-202ENST00000344785 NCOA3Q9Y6Q9 1424 aa23.15■■□□□ 1.3
RBM38-202ENST00000344785 CAMTA1Q9Y6Y1 1673 aa23.15■■□□□ 1.3
RBM38-202ENST00000344785 OTUD7AQ8TE49 926 aaPredicted RBP23.15■■□□□ 1.3
RBM38-202ENST00000344785 BTBD11A6QL63 1104 aa23.14■■□□□ 1.3
RBM38-202ENST00000344785 PLEKHM2Q8IWE5 1019 aa23.14■■□□□ 1.3
RBM38-202ENST00000344785 UPF2Q9HAU5 1272 aaKnown RBP23.14■■□□□ 1.3
RBM38-202ENST00000344785 DAXXQ9UER7 740 aaPredicted RBP23.14■■□□□ 1.3
RBM38-202ENST00000344785 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.29
RBM38-202ENST00000344785 KDM4FA0A1W2PPD8 638 aa23.14■■□□□ 1.29
RBM38-202ENST00000344785 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.29
RBM38-202ENST00000344785 TEFQ10587 303 aa23.14■■□□□ 1.29
RBM38-202ENST00000344785 KDM3BQ7LBC6 1761 aa23.13■■□□□ 1.29
RBM38-202ENST00000344785 APBB1O00213 710 aa23.13■■□□□ 1.29
RBM38-202ENST00000344785 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
RBM38-202ENST00000344785 C22orf23Q9BZE7 217 aa23.13■■□□□ 1.29
RBM38-202ENST00000344785 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
RBM38-202ENST00000344785 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
RBM38-202ENST00000344785 XIRP1Q702N8 1843 aaKnown RBP23.11■■□□□ 1.29
RBM38-202ENST00000344785 ANXA1P04083 346 aa23.11■■□□□ 1.29
RBM38-202ENST00000344785 NPHP3Q7Z494 1330 aa23.11■■□□□ 1.29
RBM38-202ENST00000344785 CHPF2Q9P2E5 772 aa23.11■■□□□ 1.29
RBM38-202ENST00000344785 NLRP2Q9NX02 1062 aa23.1■■□□□ 1.29
RBM38-202ENST00000344785 PRAMEF22A3QJZ6 481 aa23.1■■□□□ 1.29
RBM38-202ENST00000344785 COL18A1P39060 1754 aa23.1■■□□□ 1.29
RBM38-202ENST00000344785 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
RBM38-202ENST00000344785 SPATA31A3Q5VYP0 1347 aa23.09■■□□□ 1.29
RBM38-202ENST00000344785 GNAI2P04899 355 aa23.08■■□□□ 1.29
RBM38-202ENST00000344785 USP44Q9H0E7 712 aa23.08■■□□□ 1.29
RBM38-202ENST00000344785 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.29
RBM38-202ENST00000344785 BRINP3Q76B58 766 aa23.08■■□□□ 1.29
RBM38-202ENST00000344785 LMTK3Q96Q04 1460 aa23.08■■□□□ 1.28
RBM38-202ENST00000344785 PNMA6EA0A0J9YXQ4 647 aa23.07■■□□□ 1.28
RBM38-202ENST00000344785 TBC1D2Q9BYX2 928 aa23.07■■□□□ 1.28
RBM38-202ENST00000344785 STRCQ7RTU9 1775 aa23.07■■□□□ 1.28
RBM38-202ENST00000344785 TBC1D9Q6ZT07 1266 aa23.07■■□□□ 1.28
RBM38-202ENST00000344785 HOXB7P09629 217 aa23.06■■□□□ 1.28
RBM38-202ENST00000344785 ZNF335Q9H4Z2 1342 aaPredicted RBP23.05■■□□□ 1.28
RBM38-202ENST00000344785 HEG1Q9ULI3 1381 aa23.05■■□□□ 1.28
RBM38-202ENST00000344785 MEGF6O75095 1541 aa23.04■■□□□ 1.28
RBM38-202ENST00000344785 GIGYF1O75420 1035 aaPredicted RBP23.04■■□□□ 1.28
RBM38-202ENST00000344785 PROSER3Q2NL68 480 aa23.04■■□□□ 1.28
RBM38-202ENST00000344785 LRRFIP2Q9Y608 721 aaKnown RBP23.04■■□□□ 1.28
RBM38-202ENST00000344785 EXOC6BQ9Y2D4 811 aa23.04■■□□□ 1.28
RBM38-202ENST00000344785 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
RBM38-202ENST00000344785 GNAI3P08754 354 aa23.03■■□□□ 1.28
RBM38-202ENST00000344785 RAPGEF4Q8WZA2 1011 aa23.03■■□□□ 1.28
RBM38-202ENST00000344785 PI4KAP2A4QPH2 592 aa23.03■■□□□ 1.28
RBM38-202ENST00000344785 TTC22Q5TAA0 569 aa23.03■■□□□ 1.28
RBM38-202ENST00000344785 PI4KAP1Q8N8J0 262 aa23.03■■□□□ 1.28
RBM38-202ENST00000344785 OVOS2A0A0G2JMS6 1433 aa23.03■■□□□ 1.28
RBM38-202ENST00000344785 KDM6AO15550 1401 aaPredicted RBP23.02■■□□□ 1.28
RBM38-202ENST00000344785 ATP8B2P98198 1209 aa23.02■■□□□ 1.28
RBM38-202ENST00000344785 HMMRO75330 724 aa23.01■■□□□ 1.27
RBM38-202ENST00000344785 SLC39A6Q13433 755 aa23.01■■□□□ 1.27
RBM38-202ENST00000344785 ADAMTS7Q9UKP4 1686 aa23.01■■□□□ 1.27
RBM38-202ENST00000344785 PXDNLA1KZ92 1463 aa23.01■■□□□ 1.27
RBM38-202ENST00000344785 CSB-PGBD3P0DP91 1061 aa23.01■■□□□ 1.27
RBM38-202ENST00000344785 RBM25P49756 843 aaKnown RBP23.01■■□□□ 1.27
RBM38-202ENST00000344785 BECN1Q14457 450 aa23.01■■□□□ 1.27
RBM38-202ENST00000344785 SIPA1L3O60292 1781 aaPredicted RBP23.01■■□□□ 1.27
RBM38-202ENST00000344785 ADCY9O60503 1353 aa23■■□□□ 1.27
RBM38-202ENST00000344785 PHKG2P15735 406 aa23■■□□□ 1.27
RBM38-202ENST00000344785 NFKBIBQ15653 356 aa23■■□□□ 1.27
RBM38-202ENST00000344785 BEND3Q5T5X7 828 aa23■■□□□ 1.27
RBM38-202ENST00000344785 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
RBM38-202ENST00000344785 NBPF7P0C2Y1 421 aaPredicted RBP22.99■■□□□ 1.27
RBM38-202ENST00000344785 TATP17735 454 aaPredicted RBP22.99■■□□□ 1.27
RBM38-202ENST00000344785 KIF2CQ99661 725 aa22.99■■□□□ 1.27
RBM38-202ENST00000344785 SRCIN1Q9C0H9 1055 aa22.99■■□□□ 1.27
RBM38-202ENST00000344785 SLAIN2Q9P270 581 aa22.99■■□□□ 1.27
RBM38-202ENST00000344785 CYP27B1O15528 508 aa22.98■■□□□ 1.27
RBM38-202ENST00000344785 RTL5Q5HYW3 569 aaPredicted RBP22.98■■□□□ 1.27
RBM38-202ENST00000344785 NFATC2IPQ8NCF5 419 aa22.98■■□□□ 1.27
RBM38-202ENST00000344785 DNAAF4Q8WXU2 420 aa22.98■■□□□ 1.27
RBM38-202ENST00000344785 SLKQ9H2G2 1235 aaPredicted RBP22.98■■□□□ 1.27
RBM38-202ENST00000344785 UBTFL1P0CB47 393 aaPredicted RBP22.97■■□□□ 1.27
RBM38-202ENST00000344785 ANTXR1Q9H6X2 564 aa22.97■■□□□ 1.27
RBM38-202ENST00000344785 DBF4Q9UBU7 674 aaPredicted RBP22.97■■□□□ 1.27
RBM38-202ENST00000344785 CDC45O75419 566 aa22.97■■□□□ 1.27
RBM38-202ENST00000344785 SDSP20132 328 aa22.97■■□□□ 1.27
RBM38-202ENST00000344785 CPDO75976 1380 aa22.97■■□□□ 1.27
RBM38-202ENST00000344785 SLC52A2Q9HAB3 445 aa22.96■■□□□ 1.27
RBM38-202ENST00000344785 TSHZ3Q63HK5 1081 aa22.96■■□□□ 1.27
RBM38-202ENST00000344785 PDIA6Q15084 440 aa22.95■■□□□ 1.26
RBM38-202ENST00000344785 ZNF790Q6PG37 636 aa22.95■■□□□ 1.26
RBM38-202ENST00000344785 SALL3Q9BXA9 1300 aa22.95■■□□□ 1.26
RBM38-202ENST00000344785 SPRYD3Q8NCJ5 442 aa22.94■■□□□ 1.26
RBM38-202ENST00000344785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.26
RBM38-202ENST00000344785 SPG7Q9UQ90 795 aa22.94■■□□□ 1.26
RBM38-202ENST00000344785 SOS2Q07890 1332 aaPredicted RBP22.94■■□□□ 1.26
RBM38-202ENST00000344785 IBTKQ9P2D0 1353 aaPredicted RBP22.93■■□□□ 1.26
RBM38-202ENST00000344785 PDE1AP54750 535 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms