RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
LRRK2-202ENST00000343742 SMC3Q9UQE7 1217 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 ABCA9Q8IUA7 1624 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 NPHP3Q7Z494 1330 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 COPS6Q7L5N1 327 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 RABEP1Q15276 862 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 LARP1Q6PKG0 1096 aaKnown RBP15.09■□□□□ 0.01
LRRK2-202ENST00000343742 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 MSH6P52701 1360 aa15.09■□□□□ 0.01
LRRK2-202ENST00000343742 CHL1O00533 1208 aa15.08■□□□□ 0.01
LRRK2-202ENST00000343742 RNF20Q5VTR2 975 aa15.08■□□□□ 0.01
LRRK2-202ENST00000343742 KIF1BPQ96EK5 621 aa15.08■□□□□ 0.01
LRRK2-202ENST00000343742 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
LRRK2-202ENST00000343742 KCNQ3O43525 872 aa15.08■□□□□ 0
LRRK2-202ENST00000343742 STK3Q13188 491 aa15.08■□□□□ 0
LRRK2-202ENST00000343742 AKAP4Q5JQC9 854 aa15.08■□□□□ 0
LRRK2-202ENST00000343742 PA2G4Q9UQ80 394 aaKnown RBP15.08■□□□□ 0
LRRK2-202ENST00000343742 KDM2BQ8NHM5 1336 aa15.08■□□□□ 0
LRRK2-202ENST00000343742 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
LRRK2-202ENST00000343742 CCDC57Q2TAC2 916 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
LRRK2-202ENST00000343742 FMNL2Q96PY5 1086 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 SHROOM2Q13796 1616 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 TRAK2O60296 914 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 TRMT2AQ8IZ69 625 aaKnown RBP15.07■□□□□ 0
LRRK2-202ENST00000343742 MAP3K4Q9Y6R4 1608 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 DRC7Q8IY82 874 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 ANKRD44Q8N8A2 993 aa15.07■□□□□ 0
LRRK2-202ENST00000343742 SDSP20132 328 aa15.06■□□□□ 0
LRRK2-202ENST00000343742 BMP2KLQ5H9B9 411 aa15.06■□□□□ 0
LRRK2-202ENST00000343742 CEP85Q6P2H3 762 aa15.06■□□□□ 0
LRRK2-202ENST00000343742 HYPKQ9NX55 129 aa15.06■□□□□ 0
LRRK2-202ENST00000343742 SBNO1A3KN83 1393 aa15.06■□□□□ 0
LRRK2-202ENST00000343742 IL17REQ8NFR9 667 aa15.05■□□□□ 0
LRRK2-202ENST00000343742 SPHKAPQ2M3C7 1700 aa15.05■□□□□ 0
LRRK2-202ENST00000343742 TBC1D32Q96NH3 1257 aa15.05■□□□□ -0
LRRK2-202ENST00000343742 SYNMO15061 1565 aa15.05■□□□□ -0
LRRK2-202ENST00000343742 MAP3K5Q99683 1374 aa15.05■□□□□ -0
LRRK2-202ENST00000343742 A2ML1A8K2U0 1454 aa15.05■□□□□ -0
LRRK2-202ENST00000343742 PRPF40AO75400 957 aaKnown RBP15.05■□□□□ -0
LRRK2-202ENST00000343742 CEP152O94986 1710 aa15.05■□□□□ -0
LRRK2-202ENST00000343742 NUCB2P80303 420 aa15.05■□□□□ -0
LRRK2-202ENST00000343742 SMC5Q8IY18 1101 aa15.04■□□□□ -0
LRRK2-202ENST00000343742 PIK3R4Q99570 1358 aa15.04■□□□□ -0
LRRK2-202ENST00000343742 G3V3G9 751 aa15.04■□□□□ -0
LRRK2-202ENST00000343742 DCAF8Q5TAQ9 597 aa15.04■□□□□ -0
LRRK2-202ENST00000343742 ANKRD13DQ6ZTN6 518 aa15.04■□□□□ -0
LRRK2-202ENST00000343742 ZCRB1Q8TBF4 217 aaKnown RBP15.04■□□□□ -0
LRRK2-202ENST00000343742 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
LRRK2-202ENST00000343742 SF3A1Q15459 793 aaKnown RBP15.03■□□□□ -0
LRRK2-202ENST00000343742 CEP126Q9P2H0 1117 aa15.03■□□□□ -0
LRRK2-202ENST00000343742 SNRPA1P09661 255 aaKnown RBP15.03■□□□□ -0
LRRK2-202ENST00000343742 MSNP26038 577 aaKnown RBP15.03■□□□□ -0
LRRK2-202ENST00000343742 TTC22Q5TAA0 569 aa15.03■□□□□ -0
LRRK2-202ENST00000343742 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
LRRK2-202ENST00000343742 RNMTO43148 476 aaKnown RBP15.03■□□□□ -0
LRRK2-202ENST00000343742 ARHGAP31Q2M1Z3 1444 aa15.03■□□□□ -0
LRRK2-202ENST00000343742 PTMSP20962 102 aa15.02■□□□□ -0
LRRK2-202ENST00000343742 SIRT1Q96EB6 747 aa15.02■□□□□ -0
LRRK2-202ENST00000343742 CPLX1O14810 134 aa15.02■□□□□ -0
LRRK2-202ENST00000343742 STARD3NLO95772 234 aa15.02■□□□□ -0
LRRK2-202ENST00000343742 RHPN1Q8TCX5 695 aa15.02■□□□□ -0
LRRK2-202ENST00000343742 JAKMIP1Q96N16 626 aaKnown RBP15.02■□□□□ -0
LRRK2-202ENST00000343742 MADDQ8WXG6 1647 aa15.02■□□□□ -0
LRRK2-202ENST00000343742 EXOC5O00471 708 aa15.02□□□□□ -0.01
LRRK2-202ENST00000343742 CAVIN1Q6NZI2 390 aaKnown RBP15.02□□□□□ -0.01
LRRK2-202ENST00000343742 RNF214Q8ND24 703 aa15.02□□□□□ -0.01
LRRK2-202ENST00000343742 BRPF3Q9ULD4 1205 aa15.02□□□□□ -0.01
LRRK2-202ENST00000343742 TTC39AQ5SRH9 613 aa15.02□□□□□ -0.01
LRRK2-202ENST00000343742 PDE1AP54750 535 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 PLEKHG1Q9ULL1 1385 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
LRRK2-202ENST00000343742 FBXW7Q969H0 707 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 DCTPP1Q9H773 170 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 TRDNQ13061 729 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 NGLY1Q96IV0 654 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 SNRKQ9NRH2 765 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 USP19O94966 1318 aa15.01□□□□□ -0.01
LRRK2-202ENST00000343742 PPRC1Q5VV67 1664 aaKnown RBP15.01□□□□□ -0.01
LRRK2-202ENST00000343742 GLRX3O76003 335 aaKnown RBP15.01□□□□□ -0.01
LRRK2-202ENST00000343742 MTMR7Q9Y216 660 aa15□□□□□ -0.01
LRRK2-202ENST00000343742 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
LRRK2-202ENST00000343742 CCDC158Q5M9N0 1113 aa15□□□□□ -0.01
LRRK2-202ENST00000343742 FIBPO43427 364 aa15□□□□□ -0.01
LRRK2-202ENST00000343742 HTATSF1O43719 755 aaKnown RBP15□□□□□ -0.01
LRRK2-202ENST00000343742 KLHDC4Q8TBB5 520 aa15□□□□□ -0.01
LRRK2-202ENST00000343742 NFXL1Q6ZNB6 911 aa15□□□□□ -0.01
LRRK2-202ENST00000343742 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
LRRK2-202ENST00000343742 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
LRRK2-202ENST00000343742 CASTP20810 708 aaKnown RBP14.99□□□□□ -0.01
LRRK2-202ENST00000343742 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
LRRK2-202ENST00000343742 CHMP4CQ96CF2 233 aa14.99□□□□□ -0.01
LRRK2-202ENST00000343742 ABCA6Q8N139 1617 aa14.99□□□□□ -0.01
LRRK2-202ENST00000343742 INSRP06213 1382 aa14.99□□□□□ -0.01
LRRK2-202ENST00000343742 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
LRRK2-202ENST00000343742 PPFIA3O75145 1194 aa14.99□□□□□ -0.01
LRRK2-202ENST00000343742 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
LRRK2-202ENST00000343742 MCM4P33991 863 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms