RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 PLSCR1O15162 318 aa11.44□□□□□ -0.58
NLRC4-201ENST00000342905 GABBR2O75899 941 aa11.44□□□□□ -0.58
NLRC4-201ENST00000342905 FCHSD2O94868 740 aa11.44□□□□□ -0.58
NLRC4-201ENST00000342905 SPG7Q9UQ90 795 aa11.44□□□□□ -0.58
NLRC4-201ENST00000342905 MAPK8IP3Q9UPT6 1336 aa11.44□□□□□ -0.58
NLRC4-201ENST00000342905 KDRP35968 1356 aa11.44□□□□□ -0.58
NLRC4-201ENST00000342905 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
NLRC4-201ENST00000342905 EZH2Q15910 746 aaKnown RBP11.43□□□□□ -0.58
NLRC4-201ENST00000342905 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
NLRC4-201ENST00000342905 PNNQ9H307 717 aaKnown RBP11.43□□□□□ -0.58
NLRC4-201ENST00000342905 ZNF521Q96K83 1311 aa11.43□□□□□ -0.58
NLRC4-201ENST00000342905 SULT6B1Q6IMI4 303 aa11.42□□□□□ -0.58
NLRC4-201ENST00000342905 PTF1AQ7RTS3 328 aa11.42□□□□□ -0.58
NLRC4-201ENST00000342905 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
NLRC4-201ENST00000342905 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
NLRC4-201ENST00000342905 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
NLRC4-201ENST00000342905 RREB1Q92766 1687 aa11.42□□□□□ -0.58
NLRC4-201ENST00000342905 CYP27B1O15528 508 aa11.41□□□□□ -0.58
NLRC4-201ENST00000342905 KCNQ2O43526 872 aa11.41□□□□□ -0.58
NLRC4-201ENST00000342905 DOT1LQ8TEK3 1739 aa11.41□□□□□ -0.58
NLRC4-201ENST00000342905 TMPOP42166 694 aaKnown RBP11.41□□□□□ -0.58
NLRC4-201ENST00000342905 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
NLRC4-201ENST00000342905 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
NLRC4-201ENST00000342905 NGEFQ8N5V2 710 aa11.41□□□□□ -0.58
NLRC4-201ENST00000342905 PHACTR3Q96KR7 559 aa11.41□□□□□ -0.58
NLRC4-201ENST00000342905 SRCAPQ6ZRS2 3230 aa11.4□□□□□ -0.58
NLRC4-201ENST00000342905 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.58
NLRC4-201ENST00000342905 NEFMP07197 916 aa11.4□□□□□ -0.59
NLRC4-201ENST00000342905 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.59
NLRC4-201ENST00000342905 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.59
NLRC4-201ENST00000342905 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.59
NLRC4-201ENST00000342905 IFNL2Q8IZJ0 200 aa11.4□□□□□ -0.59
NLRC4-201ENST00000342905 SYTL4Q96C24 671 aaPredicted RBP11.4□□□□□ -0.59
NLRC4-201ENST00000342905 BTAF1O14981 1849 aa11.4□□□□□ -0.59
NLRC4-201ENST00000342905 NUP188Q5SRE5 1749 aa11.39□□□□□ -0.59
NLRC4-201ENST00000342905 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
NLRC4-201ENST00000342905 PHKG2P15735 406 aa11.39□□□□□ -0.59
NLRC4-201ENST00000342905 NFE2L2Q16236 605 aa11.39□□□□□ -0.59
NLRC4-201ENST00000342905 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
NLRC4-201ENST00000342905 CACNA1FO60840 1977 aa11.39□□□□□ -0.59
NLRC4-201ENST00000342905 HSP90AB1P08238 724 aaKnown RBP11.38□□□□□ -0.59
NLRC4-201ENST00000342905 CCDC27Q2M243 656 aa11.38□□□□□ -0.59
NLRC4-201ENST00000342905 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
NLRC4-201ENST00000342905 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
NLRC4-201ENST00000342905 ITGB4P16144 1822 aa11.38□□□□□ -0.59
NLRC4-201ENST00000342905 RIPK4P57078 832 aa11.37□□□□□ -0.59
NLRC4-201ENST00000342905 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
NLRC4-201ENST00000342905 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
NLRC4-201ENST00000342905 ZNF530Q6P9A1 599 aaPredicted RBP11.37□□□□□ -0.59
NLRC4-201ENST00000342905 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
NLRC4-201ENST00000342905 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
NLRC4-201ENST00000342905 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
NLRC4-201ENST00000342905 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
NLRC4-201ENST00000342905 SLC27A3Q5K4L6 730 aa11.36□□□□□ -0.59
NLRC4-201ENST00000342905 PROM2Q8N271 834 aa11.36□□□□□ -0.59
NLRC4-201ENST00000342905 DCAF5Q96JK2 942 aa11.36□□□□□ -0.59
NLRC4-201ENST00000342905 SLFN5Q08AF3 891 aa11.35□□□□□ -0.59
NLRC4-201ENST00000342905 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
NLRC4-201ENST00000342905 ERVV-2B6SEH9 535 aa11.34□□□□□ -0.59
NLRC4-201ENST00000342905 R3HDM1Q15032 1099 aaKnown RBP11.34□□□□□ -0.59
NLRC4-201ENST00000342905 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
NLRC4-201ENST00000342905 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
NLRC4-201ENST00000342905 TMOD3Q9NYL9 352 aa11.34□□□□□ -0.59
NLRC4-201ENST00000342905 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
NLRC4-201ENST00000342905 HMGB2P26583 209 aaKnown RBP11.33□□□□□ -0.6
NLRC4-201ENST00000342905 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
NLRC4-201ENST00000342905 AKAP4Q5JQC9 854 aa11.33□□□□□ -0.6
NLRC4-201ENST00000342905 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
NLRC4-201ENST00000342905 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
NLRC4-201ENST00000342905 SMARCC1Q92922 1105 aaPredicted RBP11.33□□□□□ -0.6
NLRC4-201ENST00000342905 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
NLRC4-201ENST00000342905 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
NLRC4-201ENST00000342905 LY75O60449 1722 aa11.32□□□□□ -0.6
NLRC4-201ENST00000342905 E9PSI1 815 aa11.32□□□□□ -0.6
NLRC4-201ENST00000342905 LMOD3Q0VAK6 560 aa11.32□□□□□ -0.6
NLRC4-201ENST00000342905 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
NLRC4-201ENST00000342905 PIGBQ92521 554 aa11.32□□□□□ -0.6
NLRC4-201ENST00000342905 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
NLRC4-201ENST00000342905 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
NLRC4-201ENST00000342905 THUMPD2Q9BTF0 503 aaKnown RBP11.31□□□□□ -0.6
NLRC4-201ENST00000342905 LRRC4BQ9NT99 713 aa11.31□□□□□ -0.6
NLRC4-201ENST00000342905 CCNL1Q9UK58 526 aaPredicted RBP11.31□□□□□ -0.6
NLRC4-201ENST00000342905 MAP3K5Q99683 1374 aa11.31□□□□□ -0.6
NLRC4-201ENST00000342905 IL16Q14005 1332 aa11.31□□□□□ -0.6
NLRC4-201ENST00000342905 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
NLRC4-201ENST00000342905 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
NLRC4-201ENST00000342905 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
NLRC4-201ENST00000342905 PLSCR2Q9NRY7 297 aa11.3□□□□□ -0.6
NLRC4-201ENST00000342905 CABP4P57796 275 aa11.29□□□□□ -0.6
NLRC4-201ENST00000342905 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
NLRC4-201ENST00000342905 MRC1P22897 1456 aa11.29□□□□□ -0.6
NLRC4-201ENST00000342905 C5P01031 1676 aa11.29□□□□□ -0.6
NLRC4-201ENST00000342905 LRP5O75197 1615 aa11.29□□□□□ -0.6
NLRC4-201ENST00000342905 UBR2Q8IWV8 1755 aa11.29□□□□□ -0.6
NLRC4-201ENST00000342905 MCM10Q7L590 875 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 ASAP1Q9ULH1 1129 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 LAMB4A4D0S4 1761 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 GNAT3A8MTJ3 354 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms