RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 RBSNQ9H1K0 784 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 SMC3Q9UQE7 1217 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 MROH2AA6NES4 1674 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 ABCC3O15438 1527 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
LMX1A-202ENST00000342310 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
LMX1A-202ENST00000342310 PUS7Q96PZ0 661 aaKnown RBP15.18■□□□□ 0.02
LMX1A-202ENST00000342310 GLI2P10070 1586 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 QRICH2Q9H0J4 1663 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 HSP90B1P14625 803 aaKnown RBP15.18■□□□□ 0.02
LMX1A-202ENST00000342310 BOLA2Q9H3K6 86 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
LMX1A-202ENST00000342310 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
LMX1A-202ENST00000342310 ZNF853P0CG23 659 aa15.17■□□□□ 0.02
LMX1A-202ENST00000342310 FAM173BQ6P4H8 233 aa15.17■□□□□ 0.02
LMX1A-202ENST00000342310 PRDM10Q9NQV6 1147 aa15.17■□□□□ 0.02
LMX1A-202ENST00000342310 KCNA6P17658 529 aa15.17■□□□□ 0.02
LMX1A-202ENST00000342310 MYOM1P52179 1685 aa15.17■□□□□ 0.02
LMX1A-202ENST00000342310 JAKMIP1Q96N16 626 aaKnown RBP15.17■□□□□ 0.02
LMX1A-202ENST00000342310 ZMYM3Q14202 1370 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 CAMK4Q16566 473 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 RIC3Q7Z5B4 369 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 AACSQ86V21 672 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 ESYT1Q9BSJ8 1104 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 RTL1A6NKG5 1358 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
LMX1A-202ENST00000342310 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
LMX1A-202ENST00000342310 KLHL40Q2TBA0 621 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
LMX1A-202ENST00000342310 IQSEC2Q5JU85 1478 aa15.15■□□□□ 0.02
LMX1A-202ENST00000342310 LAMC1P11047 1609 aa15.15■□□□□ 0.02
LMX1A-202ENST00000342310 PRAMEF22A3QJZ6 481 aa15.15■□□□□ 0.02
LMX1A-202ENST00000342310 GADD45BO75293 160 aaPredicted RBP15.15■□□□□ 0.02
LMX1A-202ENST00000342310 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
LMX1A-202ENST00000342310 FSD2A1L4K1 749 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 USP25Q9UHP3 1055 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 AK9Q5TCS8 1911 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 ROBO2Q9HCK4 1378 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 C17orf53Q8N3J3 647 aaPredicted RBP15.14■□□□□ 0.01
LMX1A-202ENST00000342310 NEUROD6Q96NK8 337 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 TMEM63CQ9P1W3 806 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 FSD1Q9BTV5 496 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
LMX1A-202ENST00000342310 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 ADGRB3O60242 1522 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 CHMLP26374 656 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 G3BP1Q13283 466 aaKnown RBP eCLIP15.13■□□□□ 0.01
LMX1A-202ENST00000342310 RHPN1Q8TCX5 695 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
LMX1A-202ENST00000342310 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 PTPRCP08575 1304 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 CCDC173Q0VFZ6 552 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 EDC3Q96F86 508 aaKnown RBP15.13■□□□□ 0.01
LMX1A-202ENST00000342310 DDX11Q96FC9 970 aa15.13■□□□□ 0.01
LMX1A-202ENST00000342310 CLCN1P35523 988 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 GPT2Q8TD30 523 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 LMBRD1Q9NUN5 540 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 FAM135BQ49AJ0 1406 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 PTCD1O75127 700 aaKnown RBP15.12■□□□□ 0.01
LMX1A-202ENST00000342310 CNTROBQ8N137 903 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 DDX17Q92841 729 aaKnown RBP15.12■□□□□ 0.01
LMX1A-202ENST00000342310 IL25Q9H293 177 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 MAP3K2Q9Y2U5 619 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 HCLS1P14317 486 aaPredicted RBP15.12■□□□□ 0.01
LMX1A-202ENST00000342310 PTMSP20962 102 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 USP44Q9H0E7 712 aa15.12■□□□□ 0.01
LMX1A-202ENST00000342310 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
LMX1A-202ENST00000342310 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
LMX1A-202ENST00000342310 CABLES1Q8TDN4 633 aa15.11■□□□□ 0.01
LMX1A-202ENST00000342310 DNAAF4Q8WXU2 420 aa15.11■□□□□ 0.01
LMX1A-202ENST00000342310 TSC1Q92574 1164 aa15.11■□□□□ 0.01
LMX1A-202ENST00000342310 MLH3Q9UHC1 1453 aa15.11■□□□□ 0.01
LMX1A-202ENST00000342310 EDC4Q6P2E9 1401 aaKnown RBP15.11■□□□□ 0.01
LMX1A-202ENST00000342310 STK11IPQ8N1F8 1099 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 TSPOAP1O95153 1857 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 ZSCAN30Q86W11 494 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 SYAP1Q96A49 352 aaPredicted RBP15.1■□□□□ 0.01
LMX1A-202ENST00000342310 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
LMX1A-202ENST00000342310 ZFYVE9O95405 1425 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 NBPF6Q5VWK0 638 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 NBPF4Q96M43 638 aa15.1■□□□□ 0.01
LMX1A-202ENST00000342310 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
LMX1A-202ENST00000342310 CHRNA2Q15822 529 aa15.09■□□□□ 0.01
LMX1A-202ENST00000342310 KAT6BQ8WYB5 2073 aa15.09■□□□□ 0.01
LMX1A-202ENST00000342310 HOXC9P31274 260 aa15.09■□□□□ 0.01
LMX1A-202ENST00000342310 KIAA2012Q0VF49 1180 aa15.09■□□□□ 0.01
LMX1A-202ENST00000342310 CKAP2LQ8IYA6 745 aa15.09■□□□□ 0.01
LMX1A-202ENST00000342310 TSPY26PQ9H489 355 aa15.09■□□□□ 0.01
LMX1A-202ENST00000342310 CAMSAP1Q5T5Y3 1602 aa15.09■□□□□ 0.01
LMX1A-202ENST00000342310 INO80Q9ULG1 1556 aaPredicted RBP15.09■□□□□ 0.01
LMX1A-202ENST00000342310 PROSER3Q2NL68 480 aa15.08■□□□□ 0.01
LMX1A-202ENST00000342310 TTC12Q9H892 705 aaPredicted RBP15.08■□□□□ 0.01
LMX1A-202ENST00000342310 TNRQ92752 1358 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms