RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 DDX49Q9Y6V7 483 aaKnown RBP8.95□□□□□ -0.98
PTPRR-202ENST00000342084 FER1L4A9Z1Z3 1794 aa8.95□□□□□ -0.98
PTPRR-202ENST00000342084 SBNO1A3KN83 1393 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 GNAI2P04899 355 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 NLRP6P59044 892 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 FLIIQ13045 1269 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 CASC1Q6TDU7 716 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 PIK3C2AO00443 1686 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 IGSF1Q8N6C5 1336 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 DIP2AQ14689 1571 aa8.94□□□□□ -0.98
PTPRR-202ENST00000342084 ERC2O15083 957 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 HMMRO75330 724 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 CCT4P50991 539 aaKnown RBP8.93□□□□□ -0.98
PTPRR-202ENST00000342084 SKOR2Q2VWA4 1001 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-202ENST00000342084 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 STK31Q9BXU1 1019 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
PTPRR-202ENST00000342084 PALD1Q9ULE6 856 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 GOLGA6L22H0YM25 854 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 PLEKHG5O94827 1062 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 CYP2E1P05181 493 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-202ENST00000342084 CAVIN1Q6NZI2 390 aaKnown RBP8.93□□□□□ -0.98
PTPRR-202ENST00000342084 C14orf37Q86TY3 774 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 UNC5CLQ8IV45 518 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 RILPL2Q969X0 211 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 NAP1L5Q96NT1 182 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-202ENST00000342084 ZDHHC9Q9Y397 364 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 LRRFIP2Q9Y608 721 aaKnown RBP8.93□□□□□ -0.98
PTPRR-202ENST00000342084 KDRP35968 1356 aa8.93□□□□□ -0.98
PTPRR-202ENST00000342084 FAM208AQ9UK61 1670 aaKnown RBP8.92□□□□□ -0.98
PTPRR-202ENST00000342084 ST18O60284 1047 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 MAP4K4O95819 1239 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-202ENST00000342084 IL17REQ8NFR9 667 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 RBM33Q96EV2 1170 aaKnown RBP8.92□□□□□ -0.98
PTPRR-202ENST00000342084 IL1RAPL2Q9NP60 686 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 TTC21AQ8NDW8 1320 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 ZBTB7CA1YPR0 619 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 GNAT3A8MTJ3 354 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 TRIM6-TRIM34B2RNG4 842 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 PRPF40AO75400 957 aaKnown RBP8.92□□□□□ -0.98
PTPRR-202ENST00000342084 REC8O95072 547 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 HOXC9P31274 260 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 KLHL40Q2TBA0 621 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 ESYT1Q9BSJ8 1104 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 LRRCC1Q9C099 1032 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 IL25Q9H293 177 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 PHAXQ9H814 394 aaKnown RBP8.92□□□□□ -0.98
PTPRR-202ENST00000342084 LMBRD1Q9NUN5 540 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 EID1Q9Y6B2 187 aa8.92□□□□□ -0.98
PTPRR-202ENST00000342084 SALL3Q9BXA9 1300 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 XRN1Q8IZH2 1706 aaKnown RBP8.91□□□□□ -0.98
PTPRR-202ENST00000342084 ESPNB1AK53 854 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 MX1P20591 662 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 CLCN1P35523 988 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 NEK4P51957 841 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 CLEC17AQ6ZS10 378 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 OSBPL3Q9H4L5 887 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 NSFL1CQ9UNZ2 370 aaKnown RBP8.91□□□□□ -0.98
PTPRR-202ENST00000342084 LRRC37A3O60309 1634 aa8.91□□□□□ -0.98
PTPRR-202ENST00000342084 NWD1Q149M9 1564 aa8.9□□□□□ -0.98
PTPRR-202ENST00000342084 PTMSP20962 102 aa8.9□□□□□ -0.98
PTPRR-202ENST00000342084 NASPP49321 788 aaPredicted RBP8.9□□□□□ -0.98
PTPRR-202ENST00000342084 NUCB2P80303 420 aa8.9□□□□□ -0.98
PTPRR-202ENST00000342084 FOXD4L6Q3SYB3 417 aaPredicted RBP8.9□□□□□ -0.98
PTPRR-202ENST00000342084 CCDC30Q5VVM6 783 aa8.9□□□□□ -0.98
PTPRR-202ENST00000342084 FOXD4L3Q6VB84 417 aaPredicted RBP8.9□□□□□ -0.98
PTPRR-202ENST00000342084 GPT2Q8TD30 523 aa8.9□□□□□ -0.98
PTPRR-202ENST00000342084 TRIM44Q96DX7 344 aaPredicted RBP8.9□□□□□ -0.98
PTPRR-202ENST00000342084 TMX3Q96JJ7 454 aa8.9□□□□□ -0.98
PTPRR-202ENST00000342084 ANO2Q9NQ90 1003 aa8.9□□□□□ -0.98
PTPRR-202ENST00000342084 MAP3K5Q99683 1374 aa8.9□□□□□ -0.99
PTPRR-202ENST00000342084 IBTKQ9P2D0 1353 aaPredicted RBP8.9□□□□□ -0.99
PTPRR-202ENST00000342084 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.99
PTPRR-202ENST00000342084 ATP8B2P98198 1209 aa8.9□□□□□ -0.99
PTPRR-202ENST00000342084 ZSCAN23Q3MJ62 389 aa8.9□□□□□ -0.99
PTPRR-202ENST00000342084 UPF3BQ9BZI7 483 aaKnown RBP8.9□□□□□ -0.99
PTPRR-202ENST00000342084 ISY1Q9ULR0 285 aaKnown RBP8.9□□□□□ -0.99
PTPRR-202ENST00000342084 ANXA1P04083 346 aa8.89□□□□□ -0.99
PTPRR-202ENST00000342084 KCNA6P17658 529 aa8.89□□□□□ -0.99
PTPRR-202ENST00000342084 CHMLP26374 656 aa8.89□□□□□ -0.99
PTPRR-202ENST00000342084 ABTB2Q8N961 1025 aa8.89□□□□□ -0.99
PTPRR-202ENST00000342084 USP44Q9H0E7 712 aa8.89□□□□□ -0.99
PTPRR-202ENST00000342084 MARF1Q9Y4F3 1742 aaKnown RBP8.89□□□□□ -0.99
PTPRR-202ENST00000342084 TUBGCP6Q96RT7 1819 aa8.89□□□□□ -0.99
PTPRR-202ENST00000342084 KCNQ3O43525 872 aa8.88□□□□□ -0.99
PTPRR-202ENST00000342084 DTNBO60941 627 aa8.88□□□□□ -0.99
PTPRR-202ENST00000342084 GNAI3P08754 354 aa8.88□□□□□ -0.99
PTPRR-202ENST00000342084 UBTFL1P0CB47 393 aaPredicted RBP8.88□□□□□ -0.99
PTPRR-202ENST00000342084 HDGFL1Q5TGJ6 251 aa8.88□□□□□ -0.99
PTPRR-202ENST00000342084 HOMEZQ8IX15 550 aa8.88□□□□□ -0.99
PTPRR-202ENST00000342084 RBSNQ9H1K0 784 aa8.88□□□□□ -0.99
PTPRR-202ENST00000342084 TAF7Q15545 349 aaPredicted RBP8.88□□□□□ -0.99
PTPRR-202ENST00000342084 LGR6Q9HBX8 967 aa8.88□□□□□ -0.99
PTPRR-202ENST00000342084 CWC22Q9HCG8 908 aaKnown RBP8.88□□□□□ -0.99
PTPRR-202ENST00000342084 PRIM1P49642 420 aaKnown RBP8.87□□□□□ -0.99
PTPRR-202ENST00000342084 PPP1R42Q7Z4L9 355 aa8.87□□□□□ -0.99
PTPRR-202ENST00000342084 LARP6Q9BRS8 491 aaKnown RBP8.87□□□□□ -0.99
PTPRR-202ENST00000342084 TBX22Q9Y458 520 aa8.87□□□□□ -0.99
PTPRR-202ENST00000342084 SURF6O75683 361 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms