RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 SALL3Q9BXA9 1300 aa25.22■■□□□ 1.63
CLPB-202ENST00000340729 CRB1P82279 1406 aa25.22■■□□□ 1.63
CLPB-202ENST00000340729 ZMYND15Q9H091 742 aa25.22■■□□□ 1.63
CLPB-202ENST00000340729 ROBO2Q9HCK4 1378 aa25.21■■□□□ 1.63
CLPB-202ENST00000340729 CCT4P50991 539 aaKnown RBP25.21■■□□□ 1.63
CLPB-202ENST00000340729 EIF4A2Q14240 407 aaKnown RBP25.21■■□□□ 1.63
CLPB-202ENST00000340729 KRT24Q2M2I5 525 aa25.21■■□□□ 1.63
CLPB-202ENST00000340729 PKNOX2Q96KN3 472 aa25.21■■□□□ 1.63
CLPB-202ENST00000340729 SLIT1O75093 1534 aa25.2■■□□□ 1.63
CLPB-202ENST00000340729 ARHGEF10O15013 1369 aa25.2■■□□□ 1.62
CLPB-202ENST00000340729 SYCE3A1L190 88 aa25.19■■□□□ 1.62
CLPB-202ENST00000340729 EPB41L2O43491 1005 aaKnown RBP25.19■■□□□ 1.62
CLPB-202ENST00000340729 MCCP23508 829 aa25.19■■□□□ 1.62
CLPB-202ENST00000340729 NEK4P51957 841 aa25.19■■□□□ 1.62
CLPB-202ENST00000340729 ARHGAP23Q9P227 1491 aa25.19■■□□□ 1.62
CLPB-202ENST00000340729 SULT6B1Q6IMI4 303 aa25.19■■□□□ 1.62
CLPB-202ENST00000340729 ESYT1Q9BSJ8 1104 aa25.19■■□□□ 1.62
CLPB-202ENST00000340729 AEBP1Q8IUX7 1158 aa25.18■■□□□ 1.62
CLPB-202ENST00000340729 SYAP1Q96A49 352 aaPredicted RBP25.17■■□□□ 1.62
CLPB-202ENST00000340729 NCKAP5LQ9HCH0 1330 aa25.17■■□□□ 1.62
CLPB-202ENST00000340729 NSFL1CQ9UNZ2 370 aaKnown RBP25.17■■□□□ 1.62
CLPB-202ENST00000340729 R3HCC1Q9Y3T6 440 aaKnown RBP25.17■■□□□ 1.62
CLPB-202ENST00000340729 NALCNQ8IZF0 1738 aa25.17■■□□□ 1.62
CLPB-202ENST00000340729 APBB1O00213 710 aa25.16■■□□□ 1.62
CLPB-202ENST00000340729 SLC4A2P04920 1241 aa25.16■■□□□ 1.62
CLPB-202ENST00000340729 TOPAZ1Q8N9V7 1692 aa25.16■■□□□ 1.62
CLPB-202ENST00000340729 OVOS2A0A0J9YW53 1432 aa25.16■■□□□ 1.62
CLPB-202ENST00000340729 OVOS2Q6IE36 1432 aa25.16■■□□□ 1.62
CLPB-202ENST00000340729 PTPRUQ92729 1446 aa25.16■■□□□ 1.62
CLPB-202ENST00000340729 MCM10Q7L590 875 aa25.15■■□□□ 1.62
CLPB-202ENST00000340729 GNAI2P04899 355 aa25.14■■□□□ 1.61
CLPB-202ENST00000340729 XPCQ01831 940 aaPredicted RBP25.14■■□□□ 1.61
CLPB-202ENST00000340729 MTERF4Q7Z6M4 381 aaKnown RBP25.13■■□□□ 1.61
CLPB-202ENST00000340729 TSPY26PQ9H489 355 aa25.13■■□□□ 1.61
CLPB-202ENST00000340729 RIMS1Q86UR5 1692 aaKnown RBP25.13■■□□□ 1.61
CLPB-202ENST00000340729 DYNC1I1O14576 645 aa25.13■■□□□ 1.61
CLPB-202ENST00000340729 PHF14O94880 888 aa25.13■■□□□ 1.61
CLPB-202ENST00000340729 STAP2Q9UGK3 403 aa25.13■■□□□ 1.61
CLPB-202ENST00000340729 TTC21BQ7Z4L5 1316 aa25.12■■□□□ 1.61
CLPB-202ENST00000340729 PRR36Q9H6K5 1346 aa25.12■■□□□ 1.61
CLPB-202ENST00000340729 PEAK1Q9H792 1746 aa25.12■■□□□ 1.61
CLPB-202ENST00000340729 SLC26A8Q96RN1 970 aa25.12■■□□□ 1.61
CLPB-202ENST00000340729 LRRCC1Q9C099 1032 aa25.12■■□□□ 1.61
CLPB-202ENST00000340729 SRCIN1Q9C0H9 1055 aa25.12■■□□□ 1.61
CLPB-202ENST00000340729 AOX1Q06278 1338 aa25.12■■□□□ 1.61
CLPB-202ENST00000340729 N4BP2Q86UW6 1770 aaPredicted RBP25.11■■□□□ 1.61
CLPB-202ENST00000340729 MX1P20591 662 aa25.11■■□□□ 1.61
CLPB-202ENST00000340729 CHMLP26374 656 aa25.11■■□□□ 1.61
CLPB-202ENST00000340729 KLHL34Q8N239 644 aa25.1■■□□□ 1.61
CLPB-202ENST00000340729 UQCRHLA0A096LP55 91 aa25.09■■□□□ 1.61
CLPB-202ENST00000340729 UQCRHP07919 91 aa25.09■■□□□ 1.61
CLPB-202ENST00000340729 SASS6Q6UVJ0 657 aa25.09■■□□□ 1.61
CLPB-202ENST00000340729 FAM184AQ8NB25 1140 aa25.09■■□□□ 1.61
CLPB-202ENST00000340729 CHAMP1Q96JM3 812 aa25.09■■□□□ 1.61
CLPB-202ENST00000340729 USP31Q70CQ4 1352 aa25.09■■□□□ 1.61
CLPB-202ENST00000340729 UVSSAQ2YD98 709 aa25.09■■□□□ 1.61
CLPB-202ENST00000340729 GNAI3P08754 354 aa25.08■■□□□ 1.61
CLPB-202ENST00000340729 TMEM87AQ8NBN3 555 aa25.08■■□□□ 1.61
CLPB-202ENST00000340729 PALD1Q9ULE6 856 aa25.08■■□□□ 1.61
CLPB-202ENST00000340729 EID1Q9Y6B2 187 aa25.08■■□□□ 1.61
CLPB-202ENST00000340729 G2E3Q7L622 706 aa25.08■■□□□ 1.6
CLPB-202ENST00000340729 XRN1Q8IZH2 1706 aaKnown RBP25.07■■□□□ 1.6
CLPB-202ENST00000340729 PLEKHG5O94827 1062 aa25.07■■□□□ 1.6
CLPB-202ENST00000340729 ATP8B2P98198 1209 aa25.07■■□□□ 1.6
CLPB-202ENST00000340729 WDR33Q9C0J8 1336 aaKnown RBP25.07■■□□□ 1.6
CLPB-202ENST00000340729 CEP170BQ9Y4F5 1589 aaPredicted RBP25.06■■□□□ 1.6
CLPB-202ENST00000340729 EXOC6BQ9Y2D4 811 aa25.06■■□□□ 1.6
CLPB-202ENST00000340729 FAM208AQ9UK61 1670 aaKnown RBP25.06■■□□□ 1.6
CLPB-202ENST00000340729 DIP2AQ14689 1571 aa25.06■■□□□ 1.6
CLPB-202ENST00000340729 SLC4A10Q6U841 1118 aa25.05■■□□□ 1.6
CLPB-202ENST00000340729 CACNA1FO60840 1977 aa25.05■■□□□ 1.6
CLPB-202ENST00000340729 LRRC37A3O60309 1634 aa25.05■■□□□ 1.6
CLPB-202ENST00000340729 ANO2Q9NQ90 1003 aa25.05■■□□□ 1.6
CLPB-202ENST00000340729 TSPYL4Q9UJ04 414 aa25.05■■□□□ 1.6
CLPB-202ENST00000340729 PXDNLA1KZ92 1463 aa25.04■■□□□ 1.6
CLPB-202ENST00000340729 SOS1Q07889 1333 aaPredicted RBP25.04■■□□□ 1.6
CLPB-202ENST00000340729 F6X3S4 739 aa25.04■■□□□ 1.6
CLPB-202ENST00000340729 FOXD4L5Q5VV16 416 aaPredicted RBP25.04■■□□□ 1.6
CLPB-202ENST00000340729 FOXD4L4Q8WXT5 416 aaPredicted RBP25.04■■□□□ 1.6
CLPB-202ENST00000340729 FMN2Q9NZ56 1722 aa25.04■■□□□ 1.6
CLPB-202ENST00000340729 KDRP35968 1356 aa25.04■■□□□ 1.6
CLPB-202ENST00000340729 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
CLPB-202ENST00000340729 KIAA2012Q0VF49 1180 aa25.03■■□□□ 1.6
CLPB-202ENST00000340729 RNF214Q8ND24 703 aa25.03■■□□□ 1.6
CLPB-202ENST00000340729 RBM10P98175 930 aaKnown RBP25.03■■□□□ 1.6
CLPB-202ENST00000340729 STK31Q9BXU1 1019 aa25.02■■□□□ 1.6
CLPB-202ENST00000340729 FAM13BQ9NYF5 915 aa25.02■■□□□ 1.6
CLPB-202ENST00000340729 USP6P35125 1406 aa25.01■■□□□ 1.6
CLPB-202ENST00000340729 PLEKHG3A1L390 1219 aa25.01■■□□□ 1.59
CLPB-202ENST00000340729 HSPA4P34932 840 aa25.01■■□□□ 1.59
CLPB-202ENST00000340729 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
CLPB-202ENST00000340729 HSP90AB2PQ58FF8 381 aa25.01■■□□□ 1.59
CLPB-202ENST00000340729 HTATSF1O43719 755 aaKnown RBP25■■□□□ 1.59
CLPB-202ENST00000340729 LETM1O95202 739 aaPredicted RBP25■■□□□ 1.59
CLPB-202ENST00000340729 THEMISQ8N1K5 641 aaPredicted RBP25■■□□□ 1.59
CLPB-202ENST00000340729 RPAP1Q9BWH6 1393 aaPredicted RBP25■■□□□ 1.59
CLPB-202ENST00000340729 NUTM2FA1L443 756 aa25■■□□□ 1.59
CLPB-202ENST00000340729 TSHZ3Q63HK5 1081 aa25■■□□□ 1.59
CLPB-202ENST00000340729 USP48Q86UV5 1035 aa25■■□□□ 1.59
CLPB-202ENST00000340729 AMOTL2Q9Y2J4 779 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms