RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
RBFOX1-202ENST00000340209 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
RBFOX1-202ENST00000340209 DEKP35659 375 aaKnown RBP12.63□□□□□ -0.39
RBFOX1-202ENST00000340209 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
RBFOX1-202ENST00000340209 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
RBFOX1-202ENST00000340209 CRB1P82279 1406 aa12.63□□□□□ -0.39
RBFOX1-202ENST00000340209 GNAI2P04899 355 aa12.63□□□□□ -0.39
RBFOX1-202ENST00000340209 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
RBFOX1-202ENST00000340209 HMMRO75330 724 aa12.63□□□□□ -0.39
RBFOX1-202ENST00000340209 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-202ENST00000340209 PROSER3Q2NL68 480 aa12.62□□□□□ -0.39
RBFOX1-202ENST00000340209 C9orf78Q9NZ63 289 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-202ENST00000340209 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
RBFOX1-202ENST00000340209 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-202ENST00000340209 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
RBFOX1-202ENST00000340209 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 RNMTO43148 476 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 CCT4P50991 539 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 AKAP4Q5JQC9 854 aa12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 PTPRCP08575 1304 aa12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 INTS3Q68E01 1043 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
RBFOX1-202ENST00000340209 KIAA0232Q92628 1395 aa12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 FRAT2O75474 233 aaPredicted RBP12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 CHMP3Q9Y3E7 222 aa12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 KDRP35968 1356 aa12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 SIL1Q9H173 461 aa12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 XRN1Q8IZH2 1706 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 SRGAP3O43295 1099 aa12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 ANKRD44Q8N8A2 993 aa12.6□□□□□ -0.39
RBFOX1-202ENST00000340209 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 TBC1D9Q6ZT07 1266 aa12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 HSCBQ8IWL3 235 aa12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 ERBB3P21860 1342 aa12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 MAP3K2Q9Y2U5 619 aa12.59□□□□□ -0.39
RBFOX1-202ENST00000340209 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.39
RBFOX1-202ENST00000340209 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.39
RBFOX1-202ENST00000340209 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.39
RBFOX1-202ENST00000340209 NRKQ7Z2Y5 1582 aa12.58□□□□□ -0.4
RBFOX1-202ENST00000340209 RTL1A6NKG5 1358 aa12.58□□□□□ -0.4
RBFOX1-202ENST00000340209 TBC1D32Q96NH3 1257 aa12.58□□□□□ -0.4
RBFOX1-202ENST00000340209 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
RBFOX1-202ENST00000340209 CABP4P57796 275 aa12.58□□□□□ -0.4
RBFOX1-202ENST00000340209 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
RBFOX1-202ENST00000340209 GNAI3P08754 354 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 NUTM2BA6NNL0 878 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 NUTM2EB1AL46 878 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 RPAP2Q8IXW5 612 aaPredicted RBP12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 PLEKHM2Q8IWE5 1019 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 GSPT1P15170 499 aaKnown RBP12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
RBFOX1-202ENST00000340209 GZF1Q9H116 711 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-202ENST00000340209 DCTPP1Q9H773 170 aa12.56□□□□□ -0.4
RBFOX1-202ENST00000340209 PA2G4Q9UQ80 394 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-202ENST00000340209 PXDNQ92626 1479 aa12.56□□□□□ -0.4
RBFOX1-202ENST00000340209 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
RBFOX1-202ENST00000340209 CDC45O75419 566 aa12.56□□□□□ -0.4
RBFOX1-202ENST00000340209 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 LRRCC1Q9C099 1032 aa12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 ZNF496Q96IT1 587 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-202ENST00000340209 SDSP20132 328 aa12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 CHD2O14647 1828 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 MYD88Q99836 296 aa12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
RBFOX1-202ENST00000340209 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
RBFOX1-202ENST00000340209 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
RBFOX1-202ENST00000340209 ANO2Q9NQ90 1003 aa12.53□□□□□ -0.4
RBFOX1-202ENST00000340209 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
RBFOX1-202ENST00000340209 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
RBFOX1-202ENST00000340209 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
RBFOX1-202ENST00000340209 GIGYF1O75420 1035 aaPredicted RBP12.52□□□□□ -0.4
RBFOX1-202ENST00000340209 TTC22Q5TAA0 569 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms