RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 PRDM4Q9UKN5 801 aa14.68□□□□□ -0.06
CCDC144CP-201ENST00000340196 PALD1Q9ULE6 856 aa14.68□□□□□ -0.06
CCDC144CP-201ENST00000340196 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
CCDC144CP-201ENST00000340196 ZSCAN30Q86W11 494 aa14.68□□□□□ -0.06
CCDC144CP-201ENST00000340196 COG3Q96JB2 828 aa14.68□□□□□ -0.06
CCDC144CP-201ENST00000340196 RTL1A6NKG5 1358 aa14.68□□□□□ -0.06
CCDC144CP-201ENST00000340196 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
CCDC144CP-201ENST00000340196 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
CCDC144CP-201ENST00000340196 AMOTL2Q9Y2J4 779 aa14.67□□□□□ -0.06
CCDC144CP-201ENST00000340196 ANKLE2Q86XL3 938 aa14.67□□□□□ -0.06
CCDC144CP-201ENST00000340196 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.67□□□□□ -0.06
CCDC144CP-201ENST00000340196 R3HCC1Q9Y3T6 440 aaKnown RBP14.67□□□□□ -0.06
CCDC144CP-201ENST00000340196 MSNP26038 577 aaKnown RBP14.66□□□□□ -0.06
CCDC144CP-201ENST00000340196 NEK4P51957 841 aa14.66□□□□□ -0.06
CCDC144CP-201ENST00000340196 EIF4A2Q14240 407 aaKnown RBP14.66□□□□□ -0.06
CCDC144CP-201ENST00000340196 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
CCDC144CP-201ENST00000340196 NUDT16Q96DE0 195 aaKnown RBP14.66□□□□□ -0.06
CCDC144CP-201ENST00000340196 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
CCDC144CP-201ENST00000340196 ANP32BQ92688 251 aaKnown RBP14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 AKAP12Q02952 1782 aa14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 CLEC17AQ6ZS10 378 aa14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 LARP6Q9BRS8 491 aaKnown RBP14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 UPF3BQ9BZI7 483 aaKnown RBP14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 CHD2O14647 1828 aaKnown RBP14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 IL25Q9H293 177 aa14.65□□□□□ -0.06
CCDC144CP-201ENST00000340196 MON2Q7Z3U7 1717 aa14.64□□□□□ -0.07
CCDC144CP-201ENST00000340196 ZNF445P59923 1031 aa14.64□□□□□ -0.07
CCDC144CP-201ENST00000340196 NUCB2P80303 420 aa14.64□□□□□ -0.07
CCDC144CP-201ENST00000340196 ST18O60284 1047 aa14.64□□□□□ -0.07
CCDC144CP-201ENST00000340196 PDE4CQ08493 712 aa14.63□□□□□ -0.07
CCDC144CP-201ENST00000340196 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
CCDC144CP-201ENST00000340196 TMX3Q96JJ7 454 aa14.63□□□□□ -0.07
CCDC144CP-201ENST00000340196 MAP4K4O95819 1239 aaPredicted RBP14.63□□□□□ -0.07
CCDC144CP-201ENST00000340196 UNC5CLQ8IV45 518 aa14.63□□□□□ -0.07
CCDC144CP-201ENST00000340196 PRR36Q9H6K5 1346 aa14.63□□□□□ -0.07
CCDC144CP-201ENST00000340196 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
CCDC144CP-201ENST00000340196 PDE1AP54750 535 aa14.62□□□□□ -0.07
CCDC144CP-201ENST00000340196 RILPL2Q969X0 211 aa14.62□□□□□ -0.07
CCDC144CP-201ENST00000340196 FAM13BQ9NYF5 915 aa14.62□□□□□ -0.07
CCDC144CP-201ENST00000340196 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 CDK12Q9NYV4 1490 aaPredicted RBP14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 PNMA6EA0A0J9YXQ4 647 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 ERC2O15083 957 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 LMOD3Q0VAK6 560 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 CHL1O00533 1208 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 PTMSP20962 102 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 RPAP2Q8IXW5 612 aaPredicted RBP14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 ANO2Q9NQ90 1003 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 PLEKHG3A1L390 1219 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 TRIM6-TRIM34B2RNG4 842 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 GADD45BO75293 160 aaPredicted RBP14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 OFD1O75665 1012 aa14.61□□□□□ -0.07
CCDC144CP-201ENST00000340196 CASC1Q6TDU7 716 aa14.6□□□□□ -0.07
CCDC144CP-201ENST00000340196 PDCL3Q9H2J4 239 aa14.6□□□□□ -0.07
CCDC144CP-201ENST00000340196 IL1RAPL2Q9NP60 686 aa14.6□□□□□ -0.07
CCDC144CP-201ENST00000340196 IBTKQ9P2D0 1353 aaPredicted RBP14.59□□□□□ -0.07
CCDC144CP-201ENST00000340196 REC8O95072 547 aa14.59□□□□□ -0.07
CCDC144CP-201ENST00000340196 KCNA6P17658 529 aa14.59□□□□□ -0.07
CCDC144CP-201ENST00000340196 ZNF830Q96NB3 372 aaPredicted RBP14.58□□□□□ -0.08
CCDC144CP-201ENST00000340196 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
CCDC144CP-201ENST00000340196 PDLIM2Q96JY6 352 aa14.58□□□□□ -0.08
CCDC144CP-201ENST00000340196 TSPYL4Q9UJ04 414 aa14.58□□□□□ -0.08
CCDC144CP-201ENST00000340196 MTHFSDQ2M296 383 aaKnown RBP14.57□□□□□ -0.08
CCDC144CP-201ENST00000340196 NRKQ7Z2Y5 1582 aa14.57□□□□□ -0.08
CCDC144CP-201ENST00000340196 TPM2P07951 284 aa14.57□□□□□ -0.08
CCDC144CP-201ENST00000340196 LRSAM1Q6UWE0 723 aa14.57□□□□□ -0.08
CCDC144CP-201ENST00000340196 TSC1Q92574 1164 aa14.57□□□□□ -0.08
CCDC144CP-201ENST00000340196 NOL7Q9UMY1 257 aaKnown RBP14.57□□□□□ -0.08
CCDC144CP-201ENST00000340196 C17orf53Q8N3J3 647 aaPredicted RBP14.56□□□□□ -0.08
CCDC144CP-201ENST00000340196 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
CCDC144CP-201ENST00000340196 ESYT1Q9BSJ8 1104 aa14.56□□□□□ -0.08
CCDC144CP-201ENST00000340196 CWC22Q9HCG8 908 aaKnown RBP14.56□□□□□ -0.08
CCDC144CP-201ENST00000340196 NUTM1Q86Y26 1132 aa14.56□□□□□ -0.08
CCDC144CP-201ENST00000340196 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 UQCRHLA0A096LP55 91 aa14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 UQCRHP07919 91 aa14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 FMN2Q9NZ56 1722 aa14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 AATKQ6ZMQ8 1374 aa14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 RGPD8O14715 1765 aaPredicted RBP14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 CPA1P15085 419 aa14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 FKBP5Q13451 457 aaPredicted RBP14.55□□□□□ -0.08
CCDC144CP-201ENST00000340196 MX1P20591 662 aa14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 SSH2Q76I76 1423 aa14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 FAM177BA6PVY3 158 aa14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 BRD1O95696 1058 aa14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 NUTM2GQ5VZR2 741 aa14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 DDX54Q8TDD1 881 aaKnown RBP14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 LRRFIP2Q9Y608 721 aaKnown RBP14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 ACEP12821 1306 aa14.54□□□□□ -0.08
CCDC144CP-201ENST00000340196 CHMLP26374 656 aa14.53□□□□□ -0.08
CCDC144CP-201ENST00000340196 NWD1Q149M9 1564 aa14.53□□□□□ -0.08
CCDC144CP-201ENST00000340196 CRB1P82279 1406 aa14.53□□□□□ -0.08
CCDC144CP-201ENST00000340196 PTPRCP08575 1304 aa14.53□□□□□ -0.08
CCDC144CP-201ENST00000340196 TTC21BQ7Z4L5 1316 aa14.53□□□□□ -0.08
CCDC144CP-201ENST00000340196 USP6P35125 1406 aa14.53□□□□□ -0.08
CCDC144CP-201ENST00000340196 NALCNQ8IZF0 1738 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms