RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 FBXO38Q6PIJ6 1188 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 TMEM87AQ8NBN3 555 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 CCDC112Q8NEF3 446 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 FOXD4L4Q8WXT5 416 aaPredicted RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 SIRT1Q96EB6 747 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 ZNF446Q9NWS9 450 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 CLTCQ00610 1675 aaKnown RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 RAD50Q92878 1312 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 VWDEQ8N2E2 1590 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 KIDINS220Q9ULH0 1771 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 CLGNO14967 610 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 SMARCA5O60264 1052 aaPredicted RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 USP48Q86UV5 1035 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 C16orf45Q96MC5 204 aaPredicted RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 CFAP44Q96MT7 982 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 NOL10Q9BSC4 688 aaKnown RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 RASSF4Q9H2L5 321 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 NEURL4Q96JN8 1562 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 LRRC7Q96NW7 1537 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 LOC102724159A0A0B4J2E5 919 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 MX1P20591 662 aa8.13□□□□□ -1.11
CAST-203ENST00000338252 PWP2Q15269 919 aaKnown RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 ZNF777Q9ULD5 760 aaPredicted RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 NPHP4O75161 1426 aaPredicted RBP8.13□□□□□ -1.11
CAST-203ENST00000338252 ERBB3P21860 1342 aa8.12□□□□□ -1.11
CAST-203ENST00000338252 GOLGA6L6A8MZA4 724 aa8.12□□□□□ -1.11
CAST-203ENST00000338252 TNNT1P13805 278 aa8.12□□□□□ -1.11
CAST-203ENST00000338252 EXOSC9Q06265 439 aaKnown RBP8.12□□□□□ -1.11
CAST-203ENST00000338252 CUL4AQ13619 759 aa8.12□□□□□ -1.11
CAST-203ENST00000338252 DHX37Q8IY37 1157 aaKnown RBP8.12□□□□□ -1.11
CAST-203ENST00000338252 TSR2Q969E8 191 aaKnown RBP8.12□□□□□ -1.11
CAST-203ENST00000338252 ABCC11Q96J66 1382 aa8.12□□□□□ -1.11
CAST-203ENST00000338252 SETD1AO15047 1707 aaKnown RBP8.12□□□□□ -1.11
CAST-203ENST00000338252 UNC13BO14795 1591 aa8.12□□□□□ -1.11
CAST-203ENST00000338252 AXDND1Q5T1B0 1012 aaPredicted RBP8.12□□□□□ -1.11
CAST-203ENST00000338252 FBXO31Q5XUX0 539 aaPredicted RBP8.12□□□□□ -1.11
CAST-203ENST00000338252 TNRQ92752 1358 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 PTGS1P23219 599 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 TNNT3P45378 269 aaPredicted RBP8.11□□□□□ -1.11
CAST-203ENST00000338252 CTR9Q6PD62 1173 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 SIRT2Q8IXJ6 389 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 SPC24Q8NBT2 197 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 TMX3Q96JJ7 454 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 GDPD2Q9HCC8 539 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 ATG3Q9NT62 314 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 ABCC1P33527 1531 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 PLEKHM2Q8IWE5 1019 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 FHOD1Q9Y613 1164 aa8.11□□□□□ -1.11
CAST-203ENST00000338252 RPAP1Q9BWH6 1393 aaPredicted RBP8.11□□□□□ -1.11
CAST-203ENST00000338252 ZBTB7BO15156 539 aaPredicted RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 MYCNP04198 464 aaPredicted RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 TTC22Q5TAA0 569 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 ICE2Q659A1 982 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 INTS4Q96HW7 963 aaKnown RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 KCNG1Q9UIX4 513 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 ZNF215Q9UL58 517 aaPredicted RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 PTPRCP08575 1304 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 GTF2A1P52655 376 aaPredicted RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 INTS3Q68E01 1043 aaKnown RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 ERVK-7P63135 1459 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 H2AFXP16104 143 aaPredicted RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 CASQ1P31415 396 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 BRPF1P55201 1214 aaPredicted RBP8.1□□□□□ -1.11
CAST-203ENST00000338252 LRMPQ12912 555 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 SYT10Q6XYQ8 523 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 NCAPGQ9BPX3 1015 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 PIK3R4Q99570 1358 aa8.1□□□□□ -1.11
CAST-203ENST00000338252 FAM135BQ49AJ0 1406 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 ARHGEF5Q12774 1597 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 MYO1CO00159 1063 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 PRR29P0C7W0 189 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 HNRNPMP52272 730 aaKnown RBP eCLIP8.09□□□□□ -1.11
CAST-203ENST00000338252 BMS1Q14692 1282 aaKnown RBP8.09□□□□□ -1.11
CAST-203ENST00000338252 ERO1AQ96HE7 468 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 IFT57Q9NWB7 429 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.09□□□□□ -1.11
CAST-203ENST00000338252 MYOM2P54296 1465 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 IQGAP3Q86VI3 1631 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 IPO8O15397 1037 aaKnown RBP8.09□□□□□ -1.11
CAST-203ENST00000338252 ELF2Q15723 593 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 TXLNBQ8N3L3 684 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 ZNF622Q969S3 477 aaKnown RBP eCLIP8.09□□□□□ -1.111e-7■■□□□ 14.1
CAST-203ENST00000338252 MYCBPQ99417 103 aaPredicted RBP8.09□□□□□ -1.11
CAST-203ENST00000338252 BRMS1Q9HCU9 246 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 DUOX2Q9NRD8 1548 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 BCCIPQ9P287 314 aaKnown RBP eCLIP8.09□□□□□ -1.11
CAST-203ENST00000338252 CDC42BPBQ9Y5S2 1711 aa8.09□□□□□ -1.11
CAST-203ENST00000338252 TRIM66O15016 1216 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 GUCY2CP25092 1073 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 PLA2G4AP47712 749 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 GYS2P54840 703 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 ZSCAN25Q6NSZ9 544 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 CCDC186Q7Z3E2 898 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 LCMT1Q9UIC8 334 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 MCM2P49736 904 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 UBE2HP62256 183 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 NYAP1Q6ZVC0 841 aa8.08□□□□□ -1.12
CAST-203ENST00000338252 NEK11Q8NG66 645 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms